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Protein
Submitted name:

RagC

Gene

ragC

Organism
Bradyrhizobium japonicum
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein inferred from homologyi

Functioni

GO - Molecular functioni

Complete GO annotation...

Names & Taxonomyi

Protein namesi
Submitted name:
RagCImported
Gene namesi
Name:ragCImported
OrganismiBradyrhizobium japonicumImported
Taxonomic identifieri375 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaAlphaproteobacteriaRhizobialesBradyrhizobiaceaeBradyrhizobium

Subcellular locationi

Topology

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Transmembranei12 – 29HelicalSequence analysisAdd BLAST18
Transmembranei360 – 380HelicalSequence analysisAdd BLAST21
Transmembranei537 – 557HelicalSequence analysisAdd BLAST21
Transmembranei888 – 907HelicalSequence analysisAdd BLAST20
Transmembranei914 – 934HelicalSequence analysisAdd BLAST21
Transmembranei940 – 963HelicalSequence analysisAdd BLAST24
Transmembranei989 – 1007HelicalSequence analysisAdd BLAST19
Transmembranei1019 – 1042HelicalSequence analysisAdd BLAST24

GO - Cellular componenti

Complete GO annotation...

Keywords - Cellular componenti

Membrane

Structurei

3D structure databases

ProteinModelPortaliO69238.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family. [View classification]SAAS annotation

Keywords - Domaini

Transmembrane, Transmembrane helixSequence analysis

Family and domain databases

Gene3Di3.30.2090.10. 2 hits.
InterProiIPR027463. AcrB_DN_DC_subdom.
IPR001036. Acrflvin-R.
[Graphical view]
PfamiPF00873. ACR_tran. 2 hits.
[Graphical view]
PRINTSiPR00702. ACRIFLAVINRP.
SUPFAMiSSF82714. SSF82714. 2 hits.

Sequencei

Sequence statusi: Complete.

O69238-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MGIVRFALRL PHTFYVLAAL ILFLGGIAIR SMPTDIFPEI RIPVVTVIWR
60 70 80 90 100
YTGLSTPEME QRVSTYSQYS ISANVTGIKN IEAQTLNGLS VQKIYFQPDV
110 120 130 140 150
NLDLAISQIV SATNAIRALM PPGIQPPIIV QFNASSVPVL QLSLESNSLN
160 170 180 190 200
EQQLYDFGIY RVRQQLAPVP GVTLPTPAGG KYRQIMVDID PNKLLSRGLT
210 220 230 240 250
PLDIVNAVNT QNLTLPTGTT KIGDTQYTVR TNATPATIQD LNMIPVKFAN
260 270 280 290 300
GATIFLKDVA QVRDGAQVQQ NIVREDGHRA VLLSVIKNGN ASTLAVVNGV
310 320 330 340 350
KAALTSIRAS APAGLKINEL FDQSIFVTHS VNGVLREGAI AAGLTALMIL
360 370 380 390 400
VFLGSWRSTL VVLISIPLAM LSSLVVLYFL GETLNTMTLG GLALAVGILV
410 420 430 440 450
DDSTVTIENT PALDRRGHAV VGSDPARSRR DRYSDVGLHA RDQLRVHLGR
460 470 480 490 500
ISGRPGQIFV QRRLASPWCS RCWRRTDCRG RSTPITIGLL LKGERRHGEG
510 520 530 540 550
ERSSNIFARA SAAFERGFEH LRDGYSDLLL TLLRRRVIVP VVAVLVLALG
560 570 580 590 600
ATMFVYVGRD FYPLIDGGQI QLHVRAPAGT RIERTEAIFQ AVEDKIREVI
610 620 630 640 650
PKRDRALIVD NIGLPARPYN LAFTDGSTIG VNDGTILVSL KDGHKPTADY
660 670 680 690 700
IRKLRQVLPS AFPEDTFYFQ AADIVTQILN FGLPAQIDVR TVGYGSNNLA
710 720 730 740 750
VAKELQKSLA AIPGVVDAHL QQEVDAPAFY ADIDRTRAAQ LGLNASTVAT
760 770 780 790 800
NINVSLSSSA QVSPNFWTDP TSGIPYYLAV QTPEYRANSL NSLGNTPVSA
810 820 830 840 850
SLAASGQTVP GLLSNVATFK RGTVPTNLNQ ANVQPVFDVY ASVQGRDLGS
860 870 880 890 900
VASDIDKVTS TLQKQLQPGN SIQVLGQIQS MHQSFRDLGI GLLFAAILVY
910 920 930 940 950
LLMVVNYQNF GDPFVVIMAL PATFCGIVTM LFVTGTTLNV PSLMGAIMAV
960 970 980 990 1000
GVASANSILL VTFARDEQLK GHSAFQAALS AGRTRIRPVL KTAAAMIVGM
1010 1020 1030 1040 1050
IPMAIGGPGE EQNAALARAV IGGLLFATPT TLLIVPYLFA MLRKGNDGKP
1060
RHGVFEEQPE
Length:1,060
Mass (Da):114,382
Last modified:August 1, 1998 - v1
Checksum:i72EA3CB387D57D7B
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AJ225023 Genomic DNA. Translation: CAA12353.1.
PIRiT31341.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AJ225023 Genomic DNA. Translation: CAA12353.1.
PIRiT31341.

3D structure databases

ProteinModelPortaliO69238.
ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Family and domain databases

Gene3Di3.30.2090.10. 2 hits.
InterProiIPR027463. AcrB_DN_DC_subdom.
IPR001036. Acrflvin-R.
[Graphical view]
PfamiPF00873. ACR_tran. 2 hits.
[Graphical view]
PRINTSiPR00702. ACRIFLAVINRP.
SUPFAMiSSF82714. SSF82714. 2 hits.
ProtoNetiSearch...

Entry informationi

Entry nameiO69238_BRAJP
AccessioniPrimary (citable) accession number: O69238
Entry historyi
Integrated into UniProtKB/TrEMBL: August 1, 1998
Last sequence update: August 1, 1998
Last modified: November 30, 2016
This is version 41 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.