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Protein

Leader peptidase HopD

Gene

hopD

Organism
Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)
Status
Reviewed-Annotation score: Annotation score: 1 out of 5-Protein inferred from homologyi

Functioni

GO - Molecular functioni

Complete GO annotation...

Enzyme and pathway databases

BioCyciSENT99287:GCTI-3464-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
Leader peptidase HopD
Gene namesi
Name:hopD
Ordered Locus Names:STM3442
OrganismiSalmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)
Taxonomic identifieri99287 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaEnterobacterialesEnterobacteriaceaeSalmonella
Proteomesi
  • UP000001014 Componenti: Chromosome

Subcellular locationi

GO - Cellular componenti

Complete GO annotation...

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 155155Leader peptidase HopDPRO_0000192636Add
BLAST

Proteomic databases

PaxDbiO68927.

Interactioni

Protein-protein interaction databases

STRINGi99287.STM3442.

Family & Domainsi

Sequence similaritiesi

Belongs to the peptidase A24 family.Curated

Phylogenomic databases

eggNOGiENOG4105EHH. Bacteria.
COG1989. LUCA.
HOGENOMiHOG000266211.
KOiK02506.
OMAiWAGAGLY.
OrthoDBiEOG6F55M8.
PhylomeDBiO68927.

Family and domain databases

InterProiIPR014032. Peptidase_A24A_bac.
IPR000045. Prepilin_IV_endopep_pep.
[Graphical view]
PfamiPF01478. Peptidase_A24. 1 hit.
[Graphical view]
PRINTSiPR00864. PREPILNPTASE.

Sequencei

Sequence statusi: Complete.

O68927-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MFVALPFLIF YASFSLLLGI YDARTGLLPD RFTCPLLWGG LLYHQICLPE
60 70 80 90 100
RLPDALWGAI AGYGGFALIY WGYRLRYQKE GLGYGDVKYL AALGAWHCWE
110 120 130 140 150
TLPLLVFLAA MLACGGFGVA LLVRGKSALI NPLPFGPWLA VAGFITGWKV

FFPDG
Length:155
Mass (Da):17,099
Last modified:August 1, 1998 - v1
Checksum:iBD61A50B4274920D
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AF058449 Genomic DNA. Translation: AAC14284.1.
AE006468 Genomic DNA. Translation: AAL22305.1.
RefSeqiNP_462346.1. NC_003197.1.
WP_000495848.1. NC_003197.1.

Genome annotation databases

EnsemblBacteriaiAAL22305; AAL22305; STM3442.
GeneIDi1254965.
KEGGistm:STM3442.
PATRICi32385683. VBISalEnt20916_3639.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AF058449 Genomic DNA. Translation: AAC14284.1.
AE006468 Genomic DNA. Translation: AAL22305.1.
RefSeqiNP_462346.1. NC_003197.1.
WP_000495848.1. NC_003197.1.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi99287.STM3442.

Proteomic databases

PaxDbiO68927.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiAAL22305; AAL22305; STM3442.
GeneIDi1254965.
KEGGistm:STM3442.
PATRICi32385683. VBISalEnt20916_3639.

Phylogenomic databases

eggNOGiENOG4105EHH. Bacteria.
COG1989. LUCA.
HOGENOMiHOG000266211.
KOiK02506.
OMAiWAGAGLY.
OrthoDBiEOG6F55M8.
PhylomeDBiO68927.

Enzyme and pathway databases

BioCyciSENT99287:GCTI-3464-MONOMER.

Family and domain databases

InterProiIPR014032. Peptidase_A24A_bac.
IPR000045. Prepilin_IV_endopep_pep.
[Graphical view]
PfamiPF01478. Peptidase_A24. 1 hit.
[Graphical view]
PRINTSiPR00864. PREPILNPTASE.
ProtoNetiSearch...

Publicationsi

« Hide 'large scale' publications
  1. Noorani S.M., Lindahl L., Zengel J.M.
    Submitted (APR-1998) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE [GENOMIC DNA].
    Strain: LT2.
  2. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: LT2 / SGSC1412 / ATCC 700720.

Entry informationi

Entry nameiHOPD_SALTY
AccessioniPrimary (citable) accession number: O68927
Entry historyi
Integrated into UniProtKB/Swiss-Prot: May 30, 2000
Last sequence update: August 1, 1998
Last modified: November 11, 2015
This is version 73 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Peptidase families
    Classification of peptidase families and list of entries
  2. SIMILARITY comments
    Index of protein domains and families

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.