Dissimilatory copper-containing nitrite reductase - Alcaligenes xylosoxydans xylosoxydans

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Unreviewed, UniProtKB/TrEMBL O68601 (O68601_ALCXX)

Last modified June 16, 2009. Version 62. History...

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Names and origin · Protein attributes · Ontologies · Sequences · References · Cross-references · Entry information

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Names and origin

Protein names

Submitted name:
Dissimilatory copper-containing nitrite reductase EMBL AAC05831.1
Submitted name:
Nitrite Reductase (NiR) EMBL BAA33678.1

Gene names

Name:

nir EMBL AAC05831.1

Organism

Alcaligenes xylosoxydans xylosoxydans (Achromobacter xylosoxidans) EMBL AAC05831.1

Taxonomic identifier

85698 [NCBI]

Taxonomic lineage

Bacteria › Proteobacteria › Betaproteobacteria › Burkholderiales › Alcaligenaceae › Achromobacter

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Protein attributes

Sequence length	360 AA.
Sequence status	Complete.
Sequence processing	The displayed sequence is not processed.
Protein existence	Evidence at protein level.

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Ontologies

Keywords
Domain	Signal
Gene Ontology (GO)
Biological process	nitrogen compound metabolic process Inferred from electronic annotation. Source: InterPro
Molecular function	copper ion binding Inferred from electronic annotation. Source: InterPro nitrite reductase (NO-forming) activity Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

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Sequences

Sequence

Length

Mass (Da)

Tools

O68601-1 [UniParc].

Last modified August 1, 1998. Version 1.
Checksum: 3748B5BD3BFF44E7
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FASTA

360

38,939

        10         20         30         40         50         60 
MNALRPTLLA AALAFTMAAG TAWAQDADKL PHTKVTLVAP PQVHPHEQAT KSGPKVVEFT 

        70         80         90        100        110        120 
MTIEEKKMVI DDKGTTLQAM TFNGSMPGPT LVVHEGDYVQ LTLVNPATNA MPHNVDFHGA 

       130        140        150        160        170        180 
TGALGGAKLT NVNPGEQATL RFKADRSGTF VYHCAPEGMV PWHVVSGMSG TLMVLPRDGL 

       190        200        210        220        230        240 
KDPQGKPLHY DRAYTIGEFD LYIPKGPDGK YKDYATLAES YGDTVQVMRT LTPSHIVFNG 

       250        260        270        280        290        300 
KVGALTGANA LTAKVGETVL LIHSQANRDT RPHLIGGHGD WVWETGKFAN PPQRDLETWF 

       310        320        330        340        350        360 
IRGGSAGAAL YTFKQPGVYA YLNHNLIEAF ELGAAGHIKV EGKWNDDLMK QIKAPAPIPR

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References

[1]	"Cloning, sequencing, and transcriptional studies of the gene encoding copper-containing nitrite reductase from Alcaligenes xylosoxidans NCIMB 11015." Suzuki E., Horikoshi N., Kohzuma T. Biochem. Biophys. Res. Commun. 255:427-431(1999) [PubMed: 10049725] [Abstract] Cited for: NUCLEOTIDE SEQUENCE. Strain: NCIMB11015 EMBL AAC05831.1.
[2]	"The covalent structure of the blue copper-containing nitrite reductase from Achromobacter xylosoxidans." Vandenberghe I.H., Meyer T.E., Cusanovich M.A., Van Beeumen J.J. Biochem. Biophys. Res. Commun. 247:734-740(1998) [PubMed: 9647763] [Abstract] Cited for: PROTEIN SEQUENCE.
[3]	"Cloning and Expression of Copper Nitrite Reductase Gene from Alcaligenes xylosoxidans GIFU1051." Kataoka K., Furusawa H., Yamaguchi K., Suzuki S. Submitted (APR-1998) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE. Strain: GIFU1051 EMBL BAA33678.1.
+	Additional computationally mapped references.

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Cross-references

Sequence databases

AF051831 Genomic DNA. Translation: AAC05831.1.
AB013078 Genomic DNA. Translation: BAA33678.1.

PIR

JE0215.
JG0170.

3D structure databases

Entry	Method	Resolution (Å)	Chain	Positions	PDBsum
1BQ5	X-ray	2.05	A	19-360	[»]
1GS6	X-ray	2.20	X	25-360	[»]
1GS7	X-ray	1.85	A	25-360	[»]
1GS8	X-ray	1.90	A	25-360	[»]
1HAU	X-ray	1.90	A	25-360	[»]
1HAW	X-ray	1.90	A	25-360	[»]
1NDT	X-ray	2.10	A	26-359	[»]
1OE1	X-ray	1.04	A	26-360	[»]
1OE2	X-ray	1.12	A	26-360	[»]
1OE3	X-ray	1.15	A	26-360	[»]
1WA0	X-ray	1.60	X	25-360	[»]
1WA1	X-ray	1.65	X	25-360	[»]
1WA2	X-ray	1.72	X	25-360	[»]
1WAE	X-ray	1.95	A	25-360	[»]
2BO0	X-ray	1.35	A	26-360	[»]
2BP0	X-ray	1.90	A	25-360	[»]
			B	25-360	[»]
2BP8	X-ray	1.90	A	25-360	[»]
			B	25-360	[»]
2JFC	X-ray	2.40	A/B/C/D/E/F	26-360	[»]
2JL0	X-ray	1.60	A/C	26-360	[»]
2JL3	X-ray	1.50	A/B	25-360	[»]
2VM3	X-ray	1.80	A	25-360	[»]
2VM4	X-ray	1.90	A	25-360	[»]
2VMJ	X-ray	2.50	A	25-360	[»]
2VN3	X-ray	2.35	A	25-360	[»]
2VW4	X-ray	1.90	A/B	25-360	[»]
2VW6	X-ray	1.90	A/B	25-360	[»]
2VW7	X-ray	1.90	A/B	25-360	[»]

ModBase

Search...

Family and domain databases

InterPro

IPR001117. Cu-oxidase.
IPR011707. Cu-oxidase_3.
IPR001287. Cu_NO2-reductase_N.
IPR008972. Cupredoxin.
IPR012746. Nitrite_red_Cu.
[Graphical view]

Gene3D

G3DSA:2.60.40.420. Cupredoxin. 2 hits.

Pfam

PF00394. Cu-oxidase. 1 hit.
PF07732. Cu-oxidase_3. 1 hit.
[Graphical view]

PRINTS

PR00695. CUNO2RDTASE.

ProDom

PD001235. Copper_blue_sub. 1 hit.
[Graphical view] [Entries sharing at least one domain]

TIGRFAMs

TIGR02376. Cu_nitrite_red. 1 hit.

ProtoNet

Search...

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Entry information

Entry name

O68601_ALCXX

Accession

Primary (citable) accession number: O68601

Entry history

Integrated into UniProtKB/TrEMBL:	August 1, 1998
Last sequence update:	August 1, 1998
Last modified:	June 16, 2009
This is version 62 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)

Names and origin · Protein attributes · Ontologies · Sequences · References · Cross-references · Entry information