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Protein

Beta-xylanase

Gene

xynC

Organism
Cellvibrio mixtus
Status
Unreviewed-Annotation score: Annotation score: 2 out of 5-Experimental evidence at protein leveli

Functioni

Catalytic activityi

Endohydrolysis of (1->4)-beta-D-xylosidic linkages in xylans.UniRule annotation

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Molecular functioni

GlycosidaseUniRule annotation, Hydrolase

Keywords - Biological processi

Carbohydrate metabolism, Polysaccharide degradation, Xylan degradationImported

Protein family/group databases

CAZyiGH10. Glycoside Hydrolase Family 10.

Names & Taxonomyi

Protein namesi
Recommended name:
Beta-xylanaseUniRule annotation (EC:3.2.1.8UniRule annotation)
Gene namesi
Name:xynCImported
OrganismiCellvibrio mixtusImported
Taxonomic identifieri39650 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaCellvibrionalesCellvibrionaceaeCellvibrio

Structurei

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
PDB entryMethodResolution (Å)ChainPositionsPDBsum
1UQYX-ray1.72A11-379[»]
1UQZX-ray1.55A11-379[»]
1UR1X-ray1.43A11-379[»]
1UR2X-ray1.60A11-379[»]
2CNCX-ray2.40A1-379[»]
ProteinModelPortaliO68541.
SMRiO68541.
ModBaseiSearch...
MobiDBiSearch...

Miscellaneous databases

EvolutionaryTraceiO68541.

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini30 – 377GH10 (glycosyl hydrolase family 10)InterPro annotationAdd BLAST348

Sequence similaritiesi

Belongs to the glycosyl hydrolase 10 (cellulase F) family.UniRule annotation

Family and domain databases

Gene3Di3.20.20.80. 1 hit.
InterProiIPR001000. GH10.
IPR031158. GH10_AS.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
IPR006311. TAT_signal.
[Graphical view]
PfamiPF00331. Glyco_hydro_10. 1 hit.
[Graphical view]
PRINTSiPR00134. GLHYDRLASE10.
SMARTiSM00633. Glyco_10. 1 hit.
[Graphical view]
SUPFAMiSSF51445. SSF51445. 1 hit.
PROSITEiPS00591. GH10_1. 1 hit.
PS51760. GH10_2. 1 hit.
PS51318. TAT. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

O68541-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MNLSRRQLLA LTSAGIAMGQ ASKLAAATKA AEQTGLKSAY KDNFLIGAAL
60 70 80 90 100
NATIASGADE RLNTLIAKEF NSITPENCMK WGVLRDAQGQ WNWKDADAFV
110 120 130 140 150
AFGTKHNLHM VGHTLVWHSQ IHDEVFKNAD GSYISKAALQ KKMEEHITTL
160 170 180 190 200
AGRYKGKLAA WDVVNEAVGD DLKMRDSHWY KIMGDDFIYN AFTLANEVDP
210 220 230 240 250
KAHLMYNDYN IERTGKREAT VEMIERLQKR GMPIHGLGIQ GHLGIDTPPI
260 270 280 290 300
AEIEKSIIAF AKLGLRVHFT ELDVDVLPSV WELPVAEVST RFEYKPERDP
310 320 330 340 350
YTKGLPQEMQ DKLAKRYEDL FKLFIKHSDK IDRATFWGVS DDASWLNGFP
360 370
IPGRTNYPLL FDRKLQPKDA YFRLLDLKR
Length:379
Mass (Da):42,913
Last modified:March 1, 2004 - v4
Checksum:iBC6F155B26A35502
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AF049493 Genomic DNA. Translation: AAD09439.3.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AF049493 Genomic DNA. Translation: AAD09439.3.

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
PDB entryMethodResolution (Å)ChainPositionsPDBsum
1UQYX-ray1.72A11-379[»]
1UQZX-ray1.55A11-379[»]
1UR1X-ray1.43A11-379[»]
1UR2X-ray1.60A11-379[»]
2CNCX-ray2.40A1-379[»]
ProteinModelPortaliO68541.
SMRiO68541.
ModBaseiSearch...
MobiDBiSearch...

Protein family/group databases

CAZyiGH10. Glycoside Hydrolase Family 10.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Miscellaneous databases

EvolutionaryTraceiO68541.

Family and domain databases

Gene3Di3.20.20.80. 1 hit.
InterProiIPR001000. GH10.
IPR031158. GH10_AS.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
IPR006311. TAT_signal.
[Graphical view]
PfamiPF00331. Glyco_hydro_10. 1 hit.
[Graphical view]
PRINTSiPR00134. GLHYDRLASE10.
SMARTiSM00633. Glyco_10. 1 hit.
[Graphical view]
SUPFAMiSSF51445. SSF51445. 1 hit.
PROSITEiPS00591. GH10_1. 1 hit.
PS51760. GH10_2. 1 hit.
PS51318. TAT. 1 hit.
[Graphical view]
ProtoNetiSearch...

Entry informationi

Entry nameiO68541_9GAMM
AccessioniPrimary (citable) accession number: O68541
Entry historyi
Integrated into UniProtKB/TrEMBL: August 1, 1998
Last sequence update: March 1, 2004
Last modified: November 2, 2016
This is version 79 of the entry and version 4 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

3D-structureCombined sources

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.