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Protein
Submitted name:

Regulatory protein

Gene

ifeR

Organism
Rhizobium radiobacter (Agrobacterium tumefaciens) (Agrobacterium radiobacter)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

Regions

Feature keyPosition(s)DescriptionActionsGraphical viewLength
DNA bindingi32 – 51H-T-H motifPROSITE-ProRule annotationAdd BLAST20

GO - Molecular functioni

GO - Biological processi

Keywordsi

Molecular functionDNA-bindingPROSITE-ProRule annotationSAAS annotation
Biological processTranscription, Transcription regulationSAAS annotation

Names & Taxonomyi

Protein namesi
Submitted name:
Regulatory proteinImported
Gene namesi
Name:ifeRImported
OrganismiRhizobium radiobacter (Agrobacterium tumefaciens) (Agrobacterium radiobacter)Imported
Taxonomic identifieri358 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaAlphaproteobacteriaRhizobialesRhizobiaceaeRhizobium/Agrobacterium groupAgrobacteriumAgrobacterium tumefaciens complex

Structurei

3D structure databases

ProteinModelPortaliO68442.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini9 – 69HTH tetR-typeInterPro annotationAdd BLAST61

Family and domain databases

InterProiView protein in InterPro
IPR023772. DNA-bd_HTH_TetR-type_CS.
IPR009057. Homeobox-like.
IPR001647. HTH_TetR.
PfamiView protein in Pfam
PF00440. TetR_N. 1 hit.
PRINTSiPR00455. HTHTETR.
SUPFAMiSSF46689. SSF46689. 1 hit.
PROSITEiView protein in PROSITE
PS01081. HTH_TETR_1. 1 hit.
PS50977. HTH_TETR_2. 1 hit.

Sequencei

Sequence statusi: Complete.

O68442-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MRRTKEQAAE TGRQILQAAE TLFLDKGYDN VSLEEIAALS GVTRGAIHWH
60 70 80 90 100
FKNKHGLLLA LRNEAQEPFR QFADELSEGR GSASIEKLGD IITDTFKLLE
110 120 130 140 150
QDPRQRGLLR VMMRLDIGLA EKEEGGENTF PEEMHALFVR IFRAVERSPG
160 170 180 190 200
MMKPWTPEKA ASMVYAAMGG LITEWALRKT EFTLSNDGGL FIRTLLAGLQ

RRPTDEN
Length:207
Mass (Da):23,347
Last modified:August 1, 1998 - v1
Checksum:iB7F44F03FDB9506A
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AF039653 Genomic DNA. Translation: AAC25692.1.

Similar proteinsi

Entry informationi

Entry nameiO68442_RHIRD
AccessioniPrimary (citable) accession number: O68442
Entry historyiIntegrated into UniProtKB/TrEMBL: August 1, 1998
Last sequence update: August 1, 1998
Last modified: September 27, 2017
This is version 80 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)