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Protein
Submitted name:

Transmembrane efflux pump protein

Gene

ifeB

Organism
Rhizobium radiobacter (Agrobacterium tumefaciens) (Agrobacterium radiobacter)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein inferred from homologyi

Functioni

GO - Molecular functioni

Complete GO annotation...

Protein family/group databases

TCDBi2.A.6.2.3. the resistance-nodulation-cell division (rnd) superfamily.

Names & Taxonomyi

Protein namesi
Submitted name:
Transmembrane efflux pump proteinImported
Gene namesi
Name:ifeBImported
OrganismiRhizobium radiobacter (Agrobacterium tumefaciens) (Agrobacterium radiobacter)Imported
Taxonomic identifieri358 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaAlphaproteobacteriaRhizobialesRhizobiaceaeRhizobium/Agrobacterium groupAgrobacteriumAgrobacterium tumefaciens complex

Subcellular locationi

Topology

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Transmembranei12 – 32HelicalSequence analysisAdd BLAST21
Transmembranei339 – 359HelicalSequence analysisAdd BLAST21
Transmembranei366 – 390HelicalSequence analysisAdd BLAST25
Transmembranei474 – 497HelicalSequence analysisAdd BLAST24
Transmembranei539 – 556HelicalSequence analysisAdd BLAST18
Transmembranei874 – 892HelicalSequence analysisAdd BLAST19
Transmembranei899 – 919HelicalSequence analysisAdd BLAST21
Transmembranei925 – 946HelicalSequence analysisAdd BLAST22
Transmembranei975 – 997HelicalSequence analysisAdd BLAST23
Transmembranei1003 – 1029HelicalSequence analysisAdd BLAST27

GO - Cellular componenti

Complete GO annotation...

Keywords - Cellular componenti

Membrane

Structurei

3D structure databases

ProteinModelPortaliO68441.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family. [View classification]SAAS annotation

Keywords - Domaini

Transmembrane, Transmembrane helixSequence analysis

Family and domain databases

Gene3Di3.30.2090.10. 2 hits.
InterProiIPR027463. AcrB_DN_DC_subdom.
IPR001036. Acrflvin-R.
IPR004764. HAE1.
[Graphical view]
PfamiPF00873. ACR_tran. 1 hit.
[Graphical view]
PRINTSiPR00702. ACRIFLAVINRP.
SUPFAMiSSF82714. SSF82714. 2 hits.
TIGRFAMsiTIGR00915. 2A0602. 1 hit.

Sequencei

Sequence statusi: Complete.

O68441-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MARFFIDRPI FAWVIAIIIM GLGVLSIMRL PISQYPSIAG PSVVIGATYP
60 70 80 90 100
GASAETVADT VVQIIEKEMT GLDGLRYIDS STTSTGRATV TLTFNLGTDP
110 120 130 140 150
DIAQVQVQNK LSQAEASLPS EVTRQGVTVE KSTTGFLMVI ALISDDGARS
160 170 180 190 200
AIDLADYLNS YMVEPVSRLK GVGKVEVFGS EYAMRIWLDP QKLKYYGLSP
210 220 230 240 250
TTVIHAISAQ NAQISAGSFG AMPAPEGQQL NATVTAQSLL KTPQDFERIV
260 270 280 290 300
LRADTDGGLV LLRDVARAEL GTENYEISSF YNGKPSSGVA IQLASGANAL
310 320 330 340 350
ETAELVKAKM ADLGAFLPAG VSYVIPYDTT PFVSLSIEAV IHTLIEAIVL
360 370 380 390 400
VVFVMLIFLH NFRATLIPTL AVPVVLLGTF GIMAALGFSI NTLTMLAMVL
410 420 430 440 450
AIGLLVDDAI VVVENVERIM RDEHLDPVAA TKNRWEKSRA RSWASPWWFP
460 470 480 490 500
PSSCRWRFSA VQQGEMYKQF SVTIVAAMAL SVLVALIFTP ALCATMLKAH
510 520 530 540 550
DHNAKSGLAS RFSNWFERNF SWLTTRYGNV VRASAKRPLR MFLVYLLLVG
560 570 580 590 600
AMVFLYQKTP TSFLPDEDQG TLMTIIQTPP GSTAQNTEAV LGKVENYYMN
610 620 630 640 650
AEAQNVESVF SVSWFLLAGQ GQNMGMMFVK LKDWEERKGK ENSAQAIAAR
660 670 680 690 700
AFGPLMGGIK EAIVVPLVPP AVTELGNSNG FTAFLQARSG QSHEQLLEAR
710 720 730 740 750
NMLLGLAAQS PKLMAVRPNG VEDASQFELN IDWGKAGAVG LSAADVGSFL
760 770 780 790 800
TTVWSSSYVN DFLYEGRMKR VYVQGEPLAR TGPEDLALWR VPNANGDFVD
810 820 830 840 850
LSTIASQNWV FGPQQVIRYD ALPAMSIEGS AAPGFSSGEA LAEIEALAAK
860 870 880 890 900
LPPGFSLQWT GMSLEEKDAG AGALPLYGLA LATMFLCLAA LYESWTIPVA
910 920 930 940 950
VLLAMPVGIL GALLGAWIGG QSNGVYFQVG LLTVVGLTGK NGIMIVEFAR
960 970 980 990 1000
ERMAQLGESA FEAVCQAAKL RFRPILMTSL AFGLGVIPLV ISTGAGAGAR
1010 1020 1030 1040
QAIGYATFFG TVTGTLLAIV FVPVFFVLIS GIFSRRSVKA AEPKTA
Length:1,046
Mass (Da):112,417
Last modified:August 1, 1998 - v1
Checksum:i133B4BDBEC9B0440
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AF039653 Genomic DNA. Translation: AAC25691.1.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AF039653 Genomic DNA. Translation: AAC25691.1.

3D structure databases

ProteinModelPortaliO68441.
ModBaseiSearch...
MobiDBiSearch...

Protein family/group databases

TCDBi2.A.6.2.3. the resistance-nodulation-cell division (rnd) superfamily.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Family and domain databases

Gene3Di3.30.2090.10. 2 hits.
InterProiIPR027463. AcrB_DN_DC_subdom.
IPR001036. Acrflvin-R.
IPR004764. HAE1.
[Graphical view]
PfamiPF00873. ACR_tran. 1 hit.
[Graphical view]
PRINTSiPR00702. ACRIFLAVINRP.
SUPFAMiSSF82714. SSF82714. 2 hits.
TIGRFAMsiTIGR00915. 2A0602. 1 hit.
ProtoNetiSearch...

Entry informationi

Entry nameiO68441_RHIRD
AccessioniPrimary (citable) accession number: O68441
Entry historyi
Integrated into UniProtKB/TrEMBL: August 1, 1998
Last sequence update: August 1, 1998
Last modified: November 30, 2016
This is version 39 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.