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O67911 (O67911_AQUAE) Unreviewed, UniProtKB/TrEMBL

Last modified July 9, 2014. Version 85. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry infoCustomize order

Names and origin

Protein names
Gene names
Name:pcnB2 EMBL AAC07883.1
Ordered Locus Names:aq_2158 EMBL AAC07883.1
OrganismAquifex aeolicus (strain VF5) [Reference proteome] [HAMAP] EMBL AAC07883.1
Taxonomic identifier224324 [NCBI]
Taxonomic lineageBacteriaAquificaeAquificalesAquificaceaeAquifex

Protein attributes

Sequence length512 AA.
Sequence statusComplete.
Protein existenceEvidence at protein level

General annotation (Comments)

Catalytic activity

A tRNA precursor + 2 CTP + ATP = a tRNA with a 3' CCA end + 3 diphosphate. SAAS SAAS002646

Sequence similarities

Belongs to the tRNA nucleotidyltransferase/poly(A) polymerase family. RuleBase RU003953

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Regions

Nucleotide binding132 – 1332CTP PDB 3WFR
Nucleotide binding182 – 1887CTP PDB 3WFR
Region188 – 1914Sulfate 2 binding PDB 3WFO PDB 3WFP

Sites

Binding site451CTP PDB 3WFR
Binding site451Sulfate 1 PDB 3WFS
Binding site451Sulfate 2 PDB 3WFO PDB 3WFP
Binding site561Sulfate 4 PDB 3WFO PDB 3WFS
Binding site581CTP PDB 3WFR
Binding site1371CTP; via carbonyl oxygen PDB 3WFR
Binding site1881Sulfate 1 PDB 3WFS
Binding site2221CTP PDB 3WFR

Sequences

Sequence LengthMass (Da)Tools
O67911 [UniParc].

Last modified August 1, 1998. Version 1.
Checksum: 58CDB8FD1A1B6F0F

FASTA51258,913
        10         20         30         40         50         60 
MENIEIVSSG KHTLHGLNFY LSYFDDVAKV LPREHYCFIV GGWVRDRILG EPVGYNIDVD 

        70         80         90        100        110        120 
FLTTADPVEL AKNFAKRIGG HFFVFEKRGF LIKRPTIASV VLHLPPYRYR FDFSPLKGKD 

       130        140        150        160        170        180 
LEKALIEDLK ERDFTANAIA VNLDDVLSIG AKQTIVYDPT GGIKDLEQGL LRPVSIENLK 

       190        200        210        220        230        240 
RDPVRVLRGF RIAIEKNLQL TEDFYEFVKE DPRIVLKSAV ERITHELFKI MKEKTAHKVI 

       250        260        270        280        290        300 
RELYEYGVLE AIIPEIGRLR EVKDQGEHHI YPLDEHTLKT LEYLEQVIED RAKYLSAELL 

       310        320        330        340        350        360 
ENFGKKRVLG EFTDVELLKW GALFHDIGKP QTFAVREGKV TFYEHDKVGA QIVREIGERL 

       370        380        390        400        410        420 
RWGDEATEFV AKLVRHHLRP FFLREAFKKG ELKRRGMANF WRECGDIAPH LFLLSIADAM 

       430        440        450        460        470        480 
ASGDEEEDIK ALMETIAELE SFNRNEMKEE IQKPLLNGDE IMEILGIKPG KIVGILKKAL 

       490        500        510 
LEAQIDGKVE TKEEAIEFIK RSTKNLKPLD EG 

« Hide

References

« Hide 'large scale' references
[1]"The complete genome of the hyperthermophilic bacterium Aquifex aeolicus."
Deckert G., Warren P.V., Gaasterland T., Young W.G., Lenox A.L., Graham D.E., Overbeek R., Snead M.A., Keller M., Aujay M., Huber R., Feldman R.A., Short J.M., Olson G.J., Swanson R.V.
Nature 392:353-358(1998) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: VF5 EMBL AAC07883.1.
[2]"Translocation and Rotation of tRNA during Template-Independent RNA Polymerization by tRNA Nucleotidyltransferase."
Yamashita S., Takeshita D., Tomita K.
Submitted (JUL-2013) to the PDB data bank
Cited for: X-RAY CRYSTALLOGRAPHY (3.50 ANGSTROMS) OF 16-453 IN COMPLEX WITH CTP.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
AE000657 Genomic DNA. Translation: AAC07883.1.
PIRC70485.
RefSeqNP_214480.1. NC_000918.1.

3D structure databases

PDBe
RCSB-PDB
PDBj
EntryMethodResolution (Å)ChainPositionsPDBsum
3WFOX-ray3.40A/B/C1-512[»]
3WFPX-ray4.00A/B/C/D/E/F/G/H17-450[»]
3WFQX-ray3.62E/F/G/H16-448[»]
3WFRX-ray3.50E/F/G/H16-453[»]
3WFSX-ray3.31C/D16-448[»]
ProteinModelPortalO67911.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING224324.aq_2158.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaAAC07883; AAC07883; aq_2158.
GeneID1193900.
KEGGaae:aq_2158.
PATRIC20961154. VBIAquAeo85532_1668.

Phylogenomic databases

HOGENOMHOG000062915.
KOK00970.
OMAKDVYAHS.
OrthoDBEOG64R655.

Enzyme and pathway databases

BioCycAAEO224324:GJBH-1545-MONOMER.

Family and domain databases

InterProIPR003607. HD/PDEase_dom.
IPR006674. HD_domain.
IPR002646. PolA_pol_head_dom.
IPR006675. Uncharacterised_HDIG.
[Graphical view]
PfamPF01966. HD. 1 hit.
PF01743. PolyA_pol. 1 hit.
[Graphical view]
SMARTSM00471. HDc. 1 hit.
[Graphical view]
TIGRFAMsTIGR00277. HDIG. 1 hit.
ProtoNetSearch...

Entry information

Entry nameO67911_AQUAE
AccessionPrimary (citable) accession number: O67911
Entry history
Integrated into UniProtKB/TrEMBL: August 1, 1998
Last sequence update: August 1, 1998
Last modified: July 9, 2014
This is version 85 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)