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Protein

Flagellar biosynthetic protein FliR

Gene

fliR

Organism
Aquifex aeolicus (strain VF5)
Status
Reviewed-Annotation score: Annotation score: 2 out of 5-Protein inferred from homologyi

Functioni

Role in flagellar biosynthesis.By similarity

GO - Biological processi

Complete GO annotation...

Enzyme and pathway databases

BioCyciAAEO224324:GJBH-1403-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
Flagellar biosynthetic protein FliR
Gene namesi
Name:fliR
Ordered Locus Names:aq_1961
OrganismiAquifex aeolicus (strain VF5)
Taxonomic identifieri224324 [NCBI]
Taxonomic lineageiBacteriaAquificaeAquificalesAquificaceaeAquifex
Proteomesi
  • UP000000798 Componenti: Chromosome

Subcellular locationi

Topology

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Transmembranei9 – 2921HelicalSequence analysisAdd
BLAST
Transmembranei42 – 6221HelicalSequence analysisAdd
BLAST
Transmembranei65 – 8521HelicalSequence analysisAdd
BLAST
Transmembranei125 – 14521HelicalSequence analysisAdd
BLAST
Transmembranei181 – 20121HelicalSequence analysisAdd
BLAST
Transmembranei210 – 23021HelicalSequence analysisAdd
BLAST

GO - Cellular componenti

Complete GO annotation...

Keywords - Cellular componenti

Bacterial flagellum, Cell membrane, Membrane

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 258258Flagellar biosynthetic protein FliRPRO_0000192048Add
BLAST

Interactioni

Protein-protein interaction databases

STRINGi224324.aq_1961.

Family & Domainsi

Sequence similaritiesi

Belongs to the FliR/MopE/SpaR family.Curated

Keywords - Domaini

Transmembrane, Transmembrane helix

Phylogenomic databases

eggNOGiENOG4105D19. Bacteria.
COG1684. LUCA.
HOGENOMiHOG000112609.
InParanoidiO67773.
KOiK02421.
OMAiNLAFGVM.
OrthoDBiPOG091H062O.

Family and domain databases

InterProiIPR006303. FliR.
IPR002010. T3SS_IM_R.
[Graphical view]
PfamiPF01311. Bac_export_1. 1 hit.
[Graphical view]
PRINTSiPR00953. TYPE3IMRPROT.
TIGRFAMsiTIGR01400. fliR. 1 hit.

Sequencei

Sequence statusi: Complete.

O67773-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MDKVTSEEFL ITLLLSYFRI VSFLFTFPFY GSFLIPNTIR LYLAFALSFA
60 70 80 90 100
VLSFINITPV KVNTFVEFLV YALNELLFGF SAGLILRLLF DALIIAGELI
110 120 130 140 150
ALHTGLGFLQ MFIPGMTQMS LFSGFFTLYG TLIFLSLGGG EFIILGLAES
160 170 180 190 200
FKRLPVGSFN IFYLNPEVFL NFFYESFRLG VKIAMPLILT ALILNLVLAV
210 220 230 240 250
VNRFIPQMNV FMVGLPLQVS IGLIILLLSL PLITITMSNH FQDFFKVFEY

FIQSFKSP
Length:258
Mass (Da):29,178
Last modified:August 1, 1998 - v1
Checksum:iF17CE7B57D639F3B
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AE000657 Genomic DNA. Translation: AAC07732.1.
PIRiA70468.
RefSeqiNP_214342.1. NC_000918.1.
WP_010881278.1. NC_000918.1.

Genome annotation databases

EnsemblBacteriaiAAC07732; AAC07732; aq_1961.
GeneIDi1193670.
KEGGiaae:aq_1961.
PATRICi20960834. VBIAquAeo85532_1512.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AE000657 Genomic DNA. Translation: AAC07732.1.
PIRiA70468.
RefSeqiNP_214342.1. NC_000918.1.
WP_010881278.1. NC_000918.1.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi224324.aq_1961.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiAAC07732; AAC07732; aq_1961.
GeneIDi1193670.
KEGGiaae:aq_1961.
PATRICi20960834. VBIAquAeo85532_1512.

Phylogenomic databases

eggNOGiENOG4105D19. Bacteria.
COG1684. LUCA.
HOGENOMiHOG000112609.
InParanoidiO67773.
KOiK02421.
OMAiNLAFGVM.
OrthoDBiPOG091H062O.

Enzyme and pathway databases

BioCyciAAEO224324:GJBH-1403-MONOMER.

Family and domain databases

InterProiIPR006303. FliR.
IPR002010. T3SS_IM_R.
[Graphical view]
PfamiPF01311. Bac_export_1. 1 hit.
[Graphical view]
PRINTSiPR00953. TYPE3IMRPROT.
TIGRFAMsiTIGR01400. fliR. 1 hit.
ProtoNetiSearch...

Entry informationi

Entry nameiFLIR_AQUAE
AccessioniPrimary (citable) accession number: O67773
Entry historyi
Integrated into UniProtKB/Swiss-Prot: May 30, 2000
Last sequence update: August 1, 1998
Last modified: September 7, 2016
This is version 92 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. SIMILARITY comments
    Index of protein domains and families

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.