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Protein
Submitted name:

Transcriptional regulator (H-T-H)

Gene

hth

Organism
Aquifex aeolicus (strain VF5)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Biological processi

Transcription, Transcription regulationSAAS annotation

Keywords - Ligandi

ATP-bindingSAAS annotation, Nucleotide-binding

Enzyme and pathway databases

BioCyciAAEO224324:GJBH-76-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
Transcriptional regulator (H-T-H)Imported
Gene namesi
Name:hthImported
Ordered Locus Names:aq_093Imported
OrganismiAquifex aeolicus (strain VF5)Imported
Taxonomic identifieri224324 [NCBI]
Taxonomic lineageiBacteriaAquificaeAquificalesAquificaceaeAquifex
Proteomesi
  • UP000000798 Componenti: Chromosome

Interactioni

Protein-protein interaction databases

STRINGi224324.aq_091m.

Structurei

3D structure databases

ProteinModelPortaliO66502.
SMRiO66502. Positions 1-206.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Domaini1 – 140140Sigma-54 factor interactionInterPro annotationAdd
BLAST

Sequence similaritiesi

Contains sigma-54 factor interaction domain.SAAS annotation

Phylogenomic databases

eggNOGiENOG4108JUB. Bacteria.
COG3829. LUCA.
InParanoidiO66502.
OMAiRALEMSH.
OrthoDBiEOG6WHNMG.

Family and domain databases

Gene3Di1.10.10.60. 1 hit.
3.40.50.300. 1 hit.
InterProiIPR009057. Homeodomain-like.
IPR002197. HTH_Fis.
IPR027417. P-loop_NTPase.
IPR002078. Sigma_54_int.
IPR025944. Sigma_54_int_dom_CS.
[Graphical view]
PfamiPF02954. HTH_8. 1 hit.
PF00158. Sigma54_activat. 1 hit.
[Graphical view]
PRINTSiPR01590. HTHFIS.
SUPFAMiSSF46689. SSF46689. 1 hit.
SSF52540. SSF52540. 1 hit.
PROSITEiPS00688. SIGMA54_INTERACT_3. 1 hit.
PS50045. SIGMA54_INTERACT_4. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

O66502-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MANGGTLFLD EIGELPLHLQ VKLLGLIQDK EFERIGDLKP RKADVRIIAA
60 70 80 90 100
TNKNLKKLVE EGKFREDLYY RLNVVNVELP PLRERKEDIP HLVSYFLEKF
110 120 130 140 150
SKIHGKKVKG VSPEAMKLLL EYDYPGNVRE LENAIEHAVV VSSTSLIGPD
160 170 180 190 200
DLPEEIRIGS KVKKKFRENE ELEKIKEALE RAGGNKSLAA KLLGIHRTTL
210
WRKLKEYGLA
Length:210
Mass (Da):23,948
Last modified:August 1, 1998 - v1
Checksum:i29E0F23B11FD1A77
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AE000657 Genomic DNA. Translation: AAC06459.1.
PIRiC70309.
RefSeqiNP_213061.1. NC_000918.1.

Genome annotation databases

EnsemblBacteriaiAAC06459; AAC06459; aq_093.
GeneIDi1193997.
KEGGiaae:aq_091m.
PATRICi20957882. VBIAquAeo85532_0081.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AE000657 Genomic DNA. Translation: AAC06459.1.
PIRiC70309.
RefSeqiNP_213061.1. NC_000918.1.

3D structure databases

ProteinModelPortaliO66502.
SMRiO66502. Positions 1-206.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi224324.aq_091m.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiAAC06459; AAC06459; aq_093.
GeneIDi1193997.
KEGGiaae:aq_091m.
PATRICi20957882. VBIAquAeo85532_0081.

Phylogenomic databases

eggNOGiENOG4108JUB. Bacteria.
COG3829. LUCA.
InParanoidiO66502.
OMAiRALEMSH.
OrthoDBiEOG6WHNMG.

Enzyme and pathway databases

BioCyciAAEO224324:GJBH-76-MONOMER.

Family and domain databases

Gene3Di1.10.10.60. 1 hit.
3.40.50.300. 1 hit.
InterProiIPR009057. Homeodomain-like.
IPR002197. HTH_Fis.
IPR027417. P-loop_NTPase.
IPR002078. Sigma_54_int.
IPR025944. Sigma_54_int_dom_CS.
[Graphical view]
PfamiPF02954. HTH_8. 1 hit.
PF00158. Sigma54_activat. 1 hit.
[Graphical view]
PRINTSiPR01590. HTHFIS.
SUPFAMiSSF46689. SSF46689. 1 hit.
SSF52540. SSF52540. 1 hit.
PROSITEiPS00688. SIGMA54_INTERACT_3. 1 hit.
PS50045. SIGMA54_INTERACT_4. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: VF5Imported.

Entry informationi

Entry nameiO66502_AQUAE
AccessioniPrimary (citable) accession number: O66502
Entry historyi
Integrated into UniProtKB/TrEMBL: August 1, 1998
Last sequence update: August 1, 1998
Last modified: March 16, 2016
This is version 108 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.