Skip Header

You are using a version of browser that may not display all the features of this website. Please consider upgrading your browser.
Protein

30S ribosomal protein S18

Gene

rpsR

Organism
Aquifex aeolicus (strain VF5)
Status
Reviewed-Annotation score: Annotation score: 2 out of 5-Protein inferred from homologyi

Functioni

Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit.UniRule annotation

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Molecular functioni

Ribonucleoprotein, Ribosomal protein

Keywords - Ligandi

RNA-binding, rRNA-binding

Enzyme and pathway databases

BioCyciAAEO224324:GJBH-51-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
30S ribosomal protein S18UniRule annotation
Gene namesi
Name:rpsRUniRule annotation
Ordered Locus Names:aq_064.1
ORF Names:aq_064A
OrganismiAquifex aeolicus (strain VF5)
Taxonomic identifieri224324 [NCBI]
Taxonomic lineageiBacteriaAquificaeAquificalesAquificaceaeAquifex
Proteomesi
  • UP000000798 Componenti: Chromosome

Subcellular locationi

GO - Cellular componenti

Complete GO annotation...

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 727230S ribosomal protein S18PRO_0000111107Add
BLAST

Interactioni

Subunit structurei

Part of the 30S ribosomal subunit. Forms a tight heterodimer with protein S6.UniRule annotation

Protein-protein interaction databases

STRINGi224324.aq_064a.

Structurei

3D structure databases

ProteinModelPortaliO66476.
SMRiO66476. Positions 21-69.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the ribosomal protein S18P family.UniRule annotation

Phylogenomic databases

eggNOGiENOG4105VH8. Bacteria.
COG0238. LUCA.
HOGENOMiHOG000218466.
InParanoidiO66476.
KOiK02963.
OMAiFCVERIY.
OrthoDBiPOG091H02JS.

Family and domain databases

Gene3Di4.10.640.10. 1 hit.
HAMAPiMF_00270. Ribosomal_S18. 1 hit.
InterProiIPR001648. Ribosomal_S18.
[Graphical view]
PfamiPF01084. Ribosomal_S18. 1 hit.
[Graphical view]
PRINTSiPR00974. RIBOSOMALS18.
ProDomiPD002239. Ribosomal_S18. 1 hit.
[Graphical view] [Entries sharing at least one domain]
SUPFAMiSSF46911. SSF46911. 1 hit.
TIGRFAMsiTIGR00165. S18. 1 hit.

Sequencei

Sequence statusi: Complete.

O66476-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MVVRAPKKKV CMYCEQKREP DYKNYEELRN FLTERGRIKD RKQTGLCAKH
60 70
QRRLAVQIKR ARQLGLLPYV VY
Length:72
Mass (Da):8,712
Last modified:August 1, 1998 - v1
Checksum:iFFA1A5DB02E09F35
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AE000657 Genomic DNA. Translation: AAC06446.1.
PIRiA70306.
RefSeqiNP_213036.1. NC_000918.1.
WP_010879974.1. NC_000918.1.

Genome annotation databases

EnsemblBacteriaiAAC06446; AAC06446; aq_064a.
GeneIDi1192489.
KEGGiaae:aq_064a.
PATRICi20957825. VBIAquAeo85532_0053.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AE000657 Genomic DNA. Translation: AAC06446.1.
PIRiA70306.
RefSeqiNP_213036.1. NC_000918.1.
WP_010879974.1. NC_000918.1.

3D structure databases

ProteinModelPortaliO66476.
SMRiO66476. Positions 21-69.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi224324.aq_064a.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiAAC06446; AAC06446; aq_064a.
GeneIDi1192489.
KEGGiaae:aq_064a.
PATRICi20957825. VBIAquAeo85532_0053.

Phylogenomic databases

eggNOGiENOG4105VH8. Bacteria.
COG0238. LUCA.
HOGENOMiHOG000218466.
InParanoidiO66476.
KOiK02963.
OMAiFCVERIY.
OrthoDBiPOG091H02JS.

Enzyme and pathway databases

BioCyciAAEO224324:GJBH-51-MONOMER.

Family and domain databases

Gene3Di4.10.640.10. 1 hit.
HAMAPiMF_00270. Ribosomal_S18. 1 hit.
InterProiIPR001648. Ribosomal_S18.
[Graphical view]
PfamiPF01084. Ribosomal_S18. 1 hit.
[Graphical view]
PRINTSiPR00974. RIBOSOMALS18.
ProDomiPD002239. Ribosomal_S18. 1 hit.
[Graphical view] [Entries sharing at least one domain]
SUPFAMiSSF46911. SSF46911. 1 hit.
TIGRFAMsiTIGR00165. S18. 1 hit.
ProtoNetiSearch...

Entry informationi

Entry nameiRS18_AQUAE
AccessioniPrimary (citable) accession number: O66476
Entry historyi
Integrated into UniProtKB/Swiss-Prot: May 30, 2000
Last sequence update: August 1, 1998
Last modified: September 7, 2016
This is version 90 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Ribosomal proteins
    Ribosomal proteins families and list of entries
  2. SIMILARITY comments
    Index of protein domains and families

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.