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Protein

RNA-splicing ligase RtcB

Gene

rtcB

Organism
Aquifex aeolicus (strain VF5)
Status
Unreviewed-Annotation score: -Protein inferred from homologyi

Functioni

Cofactori

Mn2+UniRule annotationNote: Binds 2 manganese ions per subunit.UniRule annotation

GO - Molecular functioni

GO - Biological processi

Keywordsi

Molecular functionLigaseUniRule annotation
LigandManganeseUniRule annotation, Metal-bindingUniRule annotation

Enzyme and pathway databases

BioCyciAAEO224324:G1G15-25-MONOMER

Names & Taxonomyi

Protein namesi
Recommended name:
RNA-splicing ligase RtcBUniRule annotation (EC:6.5.1.-UniRule annotation)
Gene namesi
Name:rtcBUniRule annotation
Ordered Locus Names:aq_032Imported
OrganismiAquifex aeolicus (strain VF5)Imported
Taxonomic identifieri224324 [NCBI]
Taxonomic lineageiBacteriaAquificaeAquificalesAquificaceaeAquifex
Proteomesi
  • UP000000798 Componenti: Chromosome

Interactioni

Subunit structurei

Monomer.UniRule annotation

Protein-protein interaction databases

STRINGi224324.aq_032

Structurei

3D structure databases

ProteinModelPortaliO66450
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the RtcB family.UniRule annotation

Phylogenomic databases

eggNOGiENOG4105E0Y Bacteria
COG1690 LUCA
HOGENOMiHOG000220065
InParanoidiO66450
KOiK14415
OMAiYDVAHNV
OrthoDBiPOG091H08J9

Family and domain databases

Gene3Di3.90.1860.10, 1 hit
InterProiView protein in InterPro
IPR001233 RtcB
IPR036025 RtcB-like_sf
PANTHERiPTHR11118 PTHR11118, 1 hit
PfamiView protein in Pfam
PF01139 RtcB, 1 hit
SUPFAMiSSF103365 SSF103365, 1 hit

Sequencei

Sequence statusi: Complete.

O66450-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MGLKEKLIRK GKYIWELPKE TIEGQRVPVI LYLSDALFEL LEEDALRQAA
60 70 80 90 100
NAATLPGVEK AIYVMPDVHV GYGFPVGGVM ATNTETGIIS PGSIGYDINC
110 120 130 140 150
GVRLIATNLK AVDVAPRIKE IMNNMLKNVP AGVGSTSEIK LSKSQMKEVL
160 170 180 190 200
VKGAGWAVEH GFGFPEDLQH IEGFGALPNA DPEKASHEAY ERGSDELGTV
210 220 230 240 250
GSGNHFVEVQ AVEQIYEPEI AEKLGIWEGQ VMVMVHSGSR GFGHQVCTDY
260 270 280 290 300
LRVALKVRDK YKIKLPDPQL ACMPFNSPEG QAYFKAMNAA ANYAFANRQI
310 320 330 340 350
LGFKAANTVR KTLGISWEEF GYRLIYDHAH NIGKVEKHEV DGKKVEVIVH
360 370 380 390 400
RKGATRAFPP YNPEVPPAYR EVGQPVIIPG DMGRASFLLV GQTNSMKMSF
410 420 430 440 450
GTACHGAGRV MSRRQAKKYV KEVGLEKVIG NLVVVARGKG TIMEEIPQAY
460 470 480
KDVTEVVRVI DELGIAKAVA RLKPLGTLKG
Length:480
Mass (Da):52,497
Last modified:August 1, 1998 - v1
Checksum:i63E697BBAAF645C4
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AE000657 Genomic DNA Translation: AAC06415.1
PIRiG70302
RefSeqiNP_213010.1, NC_000918.1
WP_010879948.1, NC_000918.1

Genome annotation databases

EnsemblBacteriaiAAC06415; AAC06415; aq_032
GeneIDi1192647
KEGGiaae:aq_032
PATRICifig|224324.8.peg.26

Similar proteinsi

Entry informationi

Entry nameiO66450_AQUAE
AccessioniPrimary (citable) accession number: O66450
Entry historyiIntegrated into UniProtKB/TrEMBL: August 1, 1998
Last sequence update: August 1, 1998
Last modified: March 28, 2018
This is version 91 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

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