O66439 (RS17_AQUAE) Reviewed, UniProtKB/Swiss-Prot

Names and origin

Protein names

Recommended name:
30S ribosomal protein S17

Gene names

Name:	rpsQ
Ordered Locus Names:	aq_020

Organism

Aquifex aeolicus (strain VF5)

Taxonomic identifier

224324 [NCBI]

Taxonomic lineage

Bacteria › Aquificae › Aquificales › Aquificaceae › Aquifex

Protein attributes

Sequence length	107 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Function	One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA By similarity. HAMAP MF_01345_B
Subunit structure	Part of the 30S ribosomal subunit.
Sequence similarities	Belongs to the ribosomal protein S17P family.

Ontologies

Keywords
Ligand	RNA-binding rRNA-binding
Molecular function	Ribonucleoprotein Ribosomal protein
Technical term	Complete proteome Reference proteome
Gene Ontology (GO)
Biological process	translation Inferred from electronic annotation. Source: InterPro
Cellular component	ribosome Inferred from electronic annotation. Source: UniProtKB-KW
Molecular function	rRNA binding Inferred from electronic annotation. Source: UniProtKB-KW structural constituent of ribosome Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequence annotation (Features)

	Feature key	Position(s)	Length	Description	Graphical view	Feature identifier
Molecule processing
	Chain	1 – 107	107	30S ribosomal protein S17 HAMAP MF_01345_B		PRO_0000128444

Sequences

	Sequence		Length	Mass (Da)
	O66439 [UniParc]. Last modified August 1, 1998. Version 1. Checksum: 1F60C146F74A58B5	FASTA	107	12,836
	10 20 30 40 50 60 MTEQKQQKKW HEKRKHLVGV VVSDKMDKTV VVKVDRKVPH PIYGKHIIKS KKYHAHDEHN 70 80 90 100 ECRVGDIVMI RETRPLSKTK RWVVVKILQR ARRPEEEIQK QQEGQEQ

References

[1]	"The complete genome of the hyperthermophilic bacterium Aquifex aeolicus." Deckert G., Warren P.V., Gaasterland T., Young W.G., Lenox A.L., Graham D.E., Overbeek R., Snead M.A., Keller M., Aujay M., Huber R., Feldman R.A., Short J.M., Olsen G.J., Swanson R.V. Nature 392:353-358(1998) [PubMed: 9537320] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: VF5.
+	Additional computationally mapped references.

Cross-references

Sequence databases
EMBL GenBank DDBJ	AE000657 Genomic DNA. Translation: AAC06400.1.
PIR	D70301.
RefSeq	NP_212998.1. NC_000918.1.
3D structure databases
ProteinModelPortal	O66439.
SMR	O66439. Positions 13-93.
ModBase	Search...
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	1192636.
GenomeReviews	Gene locus aq_020 in contig AE000657_GR.
KEGG	aae:aq_020.
NMPDR	fig|224324.1.peg.13.
PATRIC	20957745. VBIAquAeo85532_0013.
Phylogenomic databases
HOGENOM	HBG750455.
OMA	TIRECRP.
PhylomeDB	O66439.
ProtClustDB	PRK05610.
Enzyme and pathway databases
BioCyc	AAEO224324:AQ_020-MONOMER.
Family and domain databases
HAMAP	MF_01345_B. Ribosomal_S17_B. [Tree]
InterPro	IPR012340. NA-bd_OB-fold. IPR016027. NA-bd_OB-fold-like. IPR000266. Ribosomal_S17. IPR019984. Ribosomal_S17_bac-type. IPR019979. Ribosomal_S17_CS. [Graphical view]
Gene3D	G3DSA:2.40.50.140. OB_NA_bd_sub. 1 hit.
KO	K02961.
PANTHER	PTHR10744. Ribosomal_S17. 1 hit.
Pfam	PF00366. Ribosomal_S17. 1 hit. [Graphical view]
PRINTS	PR00973. RIBOSOMALS17.
ProDom	PD001295. Ribosomal_S17. 1 hit. [Graphical view] [Entries sharing at least one domain]
SUPFAM	SSF50249. Nucleic_acid_OB. 1 hit.
TIGRFAMs	TIGR03635. S17_bact. 1 hit.
PROSITE	PS00056. RIBOSOMAL_S17. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

RS17_AQUAE

Accession

Primary (citable) accession number: O66439

Entry history

Integrated into UniProtKB/Swiss-Prot:	December 15, 1998
Last sequence update:	August 1, 1998
Last modified:	January 25, 2012
This is version 60 of the entry and version 1 of the sequence. [Complete history]

Entry status

Reviewed (UniProtKB/Swiss-Prot)

Annotation program

Prokaryotic Protein Annotation Program