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Protein

Putative F-box/kelch-repeat protein At4g19330

Gene

At4g19330

Organism
Arabidopsis thaliana (Mouse-ear cress)
Status
Reviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

GO - Biological processi

  • response to cold Source: UniProtKB

Names & Taxonomyi

Protein namesi
Recommended name:
Putative F-box/kelch-repeat protein At4g19330
Gene namesi
Ordered Locus Names:At4g19330
ORF Names:T5K18.110
OrganismiArabidopsis thaliana (Mouse-ear cress)
Taxonomic identifieri3702 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaeudicotyledonsGunneridaePentapetalaerosidsmalvidsBrassicalesBrassicaceaeCamelineaeArabidopsis
Proteomesi
  • UP000006548 Componenti: Chromosome 4

Organism-specific databases

AraportiAT4G19330.
TAIRilocus:2140336. AT4G19330.

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_00002832431 – 537Putative F-box/kelch-repeat protein At4g19330Add BLAST537

Proteomic databases

PaxDbiO65704.

Expressioni

Gene expression databases

GenevisibleiO65704. AT.

Interactioni

Protein-protein interaction databases

STRINGi3702.AT4G19330.1.

Structurei

3D structure databases

ProteinModelPortaliO65704.
SMRiO65704.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini174 – 221F-boxAdd BLAST48
Repeati292 – 337Kelch 1Add BLAST46
Repeati338 – 384Kelch 2Add BLAST47
Repeati424 – 470Kelch 3Add BLAST47

Keywords - Domaini

Kelch repeat, Repeat

Phylogenomic databases

eggNOGiKOG1072. Eukaryota.
KOG1073. Eukaryota.
ENOG4110X8D. LUCA.
HOGENOMiHOG000242515.
InParanoidiO65704.
OMAiRISTSHY.
OrthoDBiEOG09360GEW.
PhylomeDBiO65704.

Family and domain databases

Gene3Di2.120.10.80. 1 hit.
InterProiView protein in InterPro
IPR001810. F-box_dom.
IPR015915. Kelch-typ_b-propeller.
IPR006652. Kelch_1.
IPR025609. Lsm14-like_N.
IPR010920. LSM_dom_sf.
PfamiView protein in Pfam
PF00646. F-box. 1 hit.
PF01344. Kelch_1. 2 hits.
PF12701. LSM14. 2 hits.
SMARTiView protein in SMART
SM00612. Kelch. 2 hits.
SM01271. LSM14. 2 hits.
SUPFAMiSSF117281. SSF117281. 1 hit.
SSF50182. SSF50182. 2 hits.

Sequencei

Sequence statusi: Complete.

O65704-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MERETSSSST PPEDLVTSMI GKFVAVMSNN DIRYEGVISL LNLQDSKLGL
60 70 80 90 100
QNGNNSIPNP LQDLLFMIFF FSIVRVYGRE VENDNEQRVF QVLKEVHSHM
110 120 130 140 150
VFRGSDIKSV EVLSLPPPAR HNSAIGHVGS LITTEDVRIE GVISHVKFHD
160 170 180 190 200
SMIFMKNCMC YGTEGRTKRR RSIVACNQLA DDIVLNILAR ISTSYYQTLS
210 220 230 240 250
LVSKTFRLLI LSKELDMERS YLGTRKPCVY VCLQSPTHPF DRRWFGLWIK
260 270 280 290 300
PYDHQPLTHW TIDIKCTGHW LLPMPSPYSR CLQIVHETVG SETYEIGGQN
310 320 330 340 350
MTPSTDVWVY DKLIGKQRKA PSMMVARKNA FTCVLDGKLY VMGGCEADES
360 370 380 390 400
THWAEVFDPK TQTWEALPDP GVELRYSSVK NIQTKQGKVY VRSNKKNFVY
410 420 430 440 450
LIKECMWEVA EENLGESTCE IENVCYCYSN KRYWWYDAKC EEWRLVKGNY
460 470 480 490 500
GGKLVVFWDR AVSRLTATKE IWCAMISLEK GHDGEIWGHI EWLDAVLIAP
510 520 530
RSLKLIIQLV LIRTIYIIDI YSFLFSVMFF ILYFIYI
Length:537
Mass (Da):61,998
Last modified:August 1, 1998 - v1
Checksum:iC8BB7506A4DBF37D
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AL022580 Genomic DNA. Translation: CAA18620.1.
AL161550 Genomic DNA. Translation: CAB78935.1.
CP002687 Genomic DNA. Translation: AEE84168.1.
PIRiT05816.
RefSeqiNP_001319995.1. NM_001341333.1.

Genome annotation databases

GeneIDi28720147.
KEGGiath:AT4G19330.

Similar proteinsi

Entry informationi

Entry nameiFBK83_ARATH
AccessioniPrimary (citable) accession number: O65704
Entry historyiIntegrated into UniProtKB/Swiss-Prot: April 3, 2007
Last sequence update: August 1, 1998
Last modified: November 22, 2017
This is version 101 of the entry and version 1 of the sequence. See complete history.
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programPlant Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Arabidopsis thaliana
    Arabidopsis thaliana: entries and gene names