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Protein

Zinc finger protein ZAT3

Gene

ZAT3

Organism
Arabidopsis thaliana (Mouse-ear cress)
Status
Reviewed-Annotation score: -Experimental evidence at protein leveli

Functioni

Mediates the regulation of male germ cell division by DUO1.1 Publication

Regions

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Zinc fingeri77 – 99C2H2-type 1PROSITE-ProRule annotationAdd BLAST23
Zinc fingeri162 – 184C2H2-type 2PROSITE-ProRule annotationAdd BLAST23
Zinc fingeri222 – 244C2H2-type 3PROSITE-ProRule annotationAdd BLAST23

GO - Molecular functioni

  • DNA binding transcription factor activity Source: TAIR
  • metal ion binding Source: UniProtKB-KW
  • nucleic acid binding Source: InterPro

GO - Biological processi

  • pollen sperm cell differentiation Source: TAIR
  • regulation of transcription, DNA-templated Source: TAIR
  • transcription, DNA-templated Source: UniProtKB-KW

Keywordsi

Biological processTranscription, Transcription regulation
LigandMetal-binding, Zinc

Names & Taxonomyi

Protein namesi
Recommended name:
Zinc finger protein ZAT3Curated
Alternative name(s):
Protein DUO1-ACTIVATED ZINC FINGER 21 Publication
Gene namesi
Name:ZAT3Curated
Synonyms:DAZ21 Publication
Ordered Locus Names:At4g35280Imported
ORF Names:F23E12.160Imported
OrganismiArabidopsis thaliana (Mouse-ear cress)
Taxonomic identifieri3702 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaeudicotyledonsGunneridaePentapetalaerosidsmalvidsBrassicalesBrassicaceaeCamelineaeArabidopsis
Proteomesi
  • UP000006548 Componenti: Chromosome 4

Organism-specific databases

AraportiAT4G35280
TAIRilocus:2122118 AT4G35280

Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cell wall Cytoskeleton Vacuole Chloroplast Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertion Graphics by Christian Stolte; Source: COMPARTMENTS

Keywords - Cellular componenti

Nucleus

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_00004097121 – 284Zinc finger protein ZAT3Add BLAST284

Proteomic databases

PaxDbiO65499

Expressioni

Tissue specificityi

Expressed exclusively in pollen.1 Publication

Developmental stagei

Expressed in the germ cells following microspore division, increases during development and persists into mature pollen.1 Publication

Inductioni

Activated by the transcription factor DUO1.1 Publication

Gene expression databases

ExpressionAtlasiO65499 baseline and differential
GenevisibleiO65499 AT

Interactioni

Subunit structurei

Interacts (via the EAR motif) with TPL.1 Publication

Protein-protein interaction databases

BioGridi14963, 1 interactor
IntActiO65499, 2 interactors
STRINGi3702.AT4G35280.1

Structurei

3D structure databases

ProteinModelPortaliO65499
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Zinc finger

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Zinc fingeri77 – 99C2H2-type 1PROSITE-ProRule annotationAdd BLAST23
Zinc fingeri162 – 184C2H2-type 2PROSITE-ProRule annotationAdd BLAST23
Zinc fingeri222 – 244C2H2-type 3PROSITE-ProRule annotationAdd BLAST23

Keywords - Domaini

Repeat, Zinc-finger

Phylogenomic databases

eggNOGiKOG1721 Eukaryota
COG5048 LUCA
HOGENOMiHOG000090842
InParanoidiO65499
OMAiTRPCSEC
OrthoDBiEOG09360KDA
PhylomeDBiO65499

Family and domain databases

InterProiView protein in InterPro
IPR036236 Znf_C2H2_sf
IPR013087 Znf_C2H2_type
SMARTiView protein in SMART
SM00355 ZnF_C2H2, 3 hits
SUPFAMiSSF57667 SSF57667, 3 hits
PROSITEiView protein in PROSITE
PS00028 ZINC_FINGER_C2H2_1, 3 hits
PS50157 ZINC_FINGER_C2H2_2, 3 hits

Sequencei

Sequence statusi: Complete.

O65499-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MNNNHSYDDR SFHIPLHPSN TSNPNPNLQF ALSSSYDHSP KKKRTKTVAS
60 70 80 90 100
SSSSSPKSAS KPKYTKKPDP NAPKITRPCT ECGRKFWSWK ALFGHMRCHP
110 120 130 140 150
ERQWRGINPP PNYRVPTAAS SKQLNQILPN WVSFMSEEDH EVASCLLMLS
160 170 180 190 200
NGTPSSSSIE RFECGGCKKV FGSHQALGGH RASHKNVKGC FAITNVTDDP
210 220 230 240 250
MTVSTSSGHD HQGKILTFSG HHKCNICFRV FSSGQALGGH MRCHWEKEEE
260 270 280
PMISGALDLN VPPTIQDLST SDTSGCCLDL RLGL
Length:284
Mass (Da):31,362
Last modified:August 1, 1998 - v1
Checksum:i9E9DAAA4DC7EE89A
GO

Sequence cautioni

The sequence ABK28666 differs from that shown. Reason: Erroneous termination at position 285. Translated as stop.Curated

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AL022604 Genomic DNA Translation: CAA18741.1
AL161587 Genomic DNA Translation: CAB80245.1
CP002687 Genomic DNA Translation: AEE86489.1
DQ446896 mRNA Translation: ABE66112.1
DQ653246 mRNA Translation: ABK28666.1 Sequence problems.
AB493719 mRNA Translation: BAH30557.1
PIRiT06129
RefSeqiNP_195254.1, NM_119694.2
UniGeneiAt.64211
At.77

Genome annotation databases

EnsemblPlantsiAT4G35280.1; AT4G35280.1; AT4G35280
GeneIDi829681
GrameneiAT4G35280.1; AT4G35280.1; AT4G35280
KEGGiath:AT4G35280

Similar proteinsi

Entry informationi

Entry nameiZAT3_ARATH
AccessioniPrimary (citable) accession number: O65499
Secondary accession number(s): A0MFC0
Entry historyiIntegrated into UniProtKB/Swiss-Prot: June 28, 2011
Last sequence update: August 1, 1998
Last modified: April 25, 2018
This is version 131 of the entry and version 1 of the sequence. See complete history.
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programPlant Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Arabidopsis thaliana
    Arabidopsis thaliana: entries and gene names

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