Skip Header

You are using a version of browser that may not display all the features of this website. Please consider upgrading your browser.
Protein

Putative cysteine-rich receptor-like protein kinase 9

Gene

CRK9

Organism
Arabidopsis thaliana (Mouse-ear cress)
Status
Reviewed-Annotation score: Annotation score: 3 out of 5-Protein uncertaini

Functioni

GO - Biological processi

  1. programmed cell death Source: TAIR
  2. response to salicylic acid Source: TAIR
  3. systemic acquired resistance Source: TAIR
Complete GO annotation...

Keywords - Molecular functioni

Receptor

Names & Taxonomyi

Protein namesi
Recommended name:
Putative cysteine-rich receptor-like protein kinase 9
Short name:
Cysteine-rich RLK9
Gene namesi
Name:CRK9
Synonyms:EP1
Ordered Locus Names:At4g23170
ORF Names:F21P8.60
OrganismiArabidopsis thaliana (Mouse-ear cress)
Taxonomic identifieri3702 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaeudicotyledonsGunneridaePentapetalaerosidsmalvidsBrassicalesBrassicaceaeCamelineaeArabidopsis
ProteomesiUP000006548 Componenti: Chromosome 4

Organism-specific databases

TAIRiAT4G23170.

Subcellular locationi

Secreted Curated

GO - Cellular componenti

  1. apoplast Source: TAIR
Complete GO annotation...

Keywords - Cellular componenti

Secreted

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Signal peptidei1 – 2323Sequence AnalysisAdd
BLAST
Chaini24 – 265242Putative cysteine-rich receptor-like protein kinase 9PRO_0000295056Add
BLAST

Amino acid modifications

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Glycosylationi35 – 351N-linked (GlcNAc...)Sequence Analysis
Glycosylationi60 – 601N-linked (GlcNAc...)Sequence Analysis
Glycosylationi69 – 691N-linked (GlcNAc...)Sequence Analysis
Glycosylationi153 – 1531N-linked (GlcNAc...)Sequence Analysis
Glycosylationi177 – 1771N-linked (GlcNAc...)Sequence Analysis
Glycosylationi246 – 2461N-linked (GlcNAc...)Sequence Analysis

Keywords - PTMi

Glycoprotein

Proteomic databases

PaxDbiO65469.
PRIDEiO65469.

Expressioni

Inductioni

By salicylic acid (SA).1 Publication

Gene expression databases

GenevestigatoriO65469.

Interactioni

Protein-protein interaction databases

IntActiO65469. 8 interactions.
STRINGi3702.AT4G23170.1-P.

Structurei

3D structure databases

ProteinModelPortaliO65469.
SMRiO65469. Positions 158-244.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Domaini27 – 131105Gnk2-homologous 1PROSITE-ProRule annotationAdd
BLAST
Domaini142 – 244103Gnk2-homologous 2PROSITE-ProRule annotationAdd
BLAST

Compositional bias

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Compositional biasi253 – 2619Poly-Pro

Sequence similaritiesi

Contains 2 Gnk2-homologous domains.PROSITE-ProRule annotation

Keywords - Domaini

Repeat, Signal

Phylogenomic databases

eggNOGiNOG306321.
HOGENOMiHOG000116552.
InParanoidiO65469.
OMAiHESCHLS.
PhylomeDBiO65469.

Family and domain databases

InterProiIPR002902. GNK2.
[Graphical view]
PfamiPF01657. Stress-antifung. 2 hits.
[Graphical view]
PROSITEiPS51473. GNK2. 2 hits.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Sequence processingi: The displayed sequence is further processed into a mature form.

O65469-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MSSLISFIFL FLFSFLTSFK ASAQDPFYLN HYCPNTTTYS RFSTYSTNLR
60 70 80 90 100
TLLSSFASRN ASYSTGFQNV TVGQTPDLVT GLFLCRGDLS PEVCSNCVAF
110 120 130 140 150
SVDEALTRCP SQREAVFYYE ECILRYSDKN ILSTAITNEG EFILSNTNTI
160 170 180 190 200
SPNQSQINQF IVLVQSNMNQ AAMEAANSSR KFSTIKTELT ELQTLYGLVQ
210 220 230 240 250
CTPDLTSQDC LRCLTRSINR MPLSRIGARQ FWPSCNSRYE LYSFYNETTI
260
GTPSPPPPPS PSRAN
Length:265
Mass (Da):29,722
Last modified:August 1, 1998 - v1
Checksum:i0404A61E511031F4
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AL022347 Genomic DNA. Translation: CAA18464.1.
AL161558 Genomic DNA. Translation: CAB79272.1.
CP002687 Genomic DNA. Translation: AEE84718.1.
BT002377 mRNA. Translation: AAO00737.1.
BT006299 mRNA. Translation: AAP13407.1.
PIRiT04834.
RefSeqiNP_194048.1. NM_118446.2.
UniGeneiAt.2195.

Genome annotation databases

EnsemblPlantsiAT4G23170.1; AT4G23170.1; AT4G23170.
GeneIDi828416.
KEGGiath:AT4G23170.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AL022347 Genomic DNA. Translation: CAA18464.1.
AL161558 Genomic DNA. Translation: CAB79272.1.
CP002687 Genomic DNA. Translation: AEE84718.1.
BT002377 mRNA. Translation: AAO00737.1.
BT006299 mRNA. Translation: AAP13407.1.
PIRiT04834.
RefSeqiNP_194048.1. NM_118446.2.
UniGeneiAt.2195.

3D structure databases

ProteinModelPortaliO65469.
SMRiO65469. Positions 158-244.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

IntActiO65469. 8 interactions.
STRINGi3702.AT4G23170.1-P.

Proteomic databases

PaxDbiO65469.
PRIDEiO65469.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblPlantsiAT4G23170.1; AT4G23170.1; AT4G23170.
GeneIDi828416.
KEGGiath:AT4G23170.

Organism-specific databases

GeneFarmi577. 92.
TAIRiAT4G23170.

Phylogenomic databases

eggNOGiNOG306321.
HOGENOMiHOG000116552.
InParanoidiO65469.
OMAiHESCHLS.
PhylomeDBiO65469.

Gene expression databases

GenevestigatoriO65469.

Family and domain databases

InterProiIPR002902. GNK2.
[Graphical view]
PfamiPF01657. Stress-antifung. 2 hits.
[Graphical view]
PROSITEiPS51473. GNK2. 2 hits.
[Graphical view]
ProtoNetiSearch...

Publicationsi

« Hide 'large scale' publications
  1. "Sequence and analysis of chromosome 4 of the plant Arabidopsis thaliana."
    Mayer K.F.X., Schueller C., Wambutt R., Murphy G., Volckaert G., Pohl T., Duesterhoeft A., Stiekema W., Entian K.-D., Terryn N., Harris B., Ansorge W., Brandt P., Grivell L.A., Rieger M., Weichselgartner M., de Simone V., Obermaier B.
    , Mache R., Mueller M., Kreis M., Delseny M., Puigdomenech P., Watson M., Schmidtheini T., Reichert B., Portetelle D., Perez-Alonso M., Boutry M., Bancroft I., Vos P., Hoheisel J., Zimmermann W., Wedler H., Ridley P., Langham S.-A., McCullagh B., Bilham L., Robben J., van der Schueren J., Grymonprez B., Chuang Y.-J., Vandenbussche F., Braeken M., Weltjens I., Voet M., Bastiaens I., Aert R., Defoor E., Weitzenegger T., Bothe G., Ramsperger U., Hilbert H., Braun M., Holzer E., Brandt A., Peters S., van Staveren M., Dirkse W., Mooijman P., Klein Lankhorst R., Rose M., Hauf J., Koetter P., Berneiser S., Hempel S., Feldpausch M., Lamberth S., Van den Daele H., De Keyser A., Buysshaert C., Gielen J., Villarroel R., De Clercq R., van Montagu M., Rogers J., Cronin A., Quail M.A., Bray-Allen S., Clark L., Doggett J., Hall S., Kay M., Lennard N., McLay K., Mayes R., Pettett A., Rajandream M.A., Lyne M., Benes V., Rechmann S., Borkova D., Bloecker H., Scharfe M., Grimm M., Loehnert T.-H., Dose S., de Haan M., Maarse A.C., Schaefer M., Mueller-Auer S., Gabel C., Fuchs M., Fartmann B., Granderath K., Dauner D., Herzl A., Neumann S., Argiriou A., Vitale D., Liguori R., Piravandi E., Massenet O., Quigley F., Clabauld G., Muendlein A., Felber R., Schnabl S., Hiller R., Schmidt W., Lecharny A., Aubourg S., Chefdor F., Cooke R., Berger C., Monfort A., Casacuberta E., Gibbons T., Weber N., Vandenbol M., Bargues M., Terol J., Torres A., Perez-Perez A., Purnelle B., Bent E., Johnson S., Tacon D., Jesse T., Heijnen L., Schwarz S., Scholler P., Heber S., Francs P., Bielke C., Frishman D., Haase D., Lemcke K., Mewes H.-W., Stocker S., Zaccaria P., Bevan M., Wilson R.K., de la Bastide M., Habermann K., Parnell L., Dedhia N., Gnoj L., Schutz K., Huang E., Spiegel L., Sekhon M., Murray J., Sheet P., Cordes M., Abu-Threideh J., Stoneking T., Kalicki J., Graves T., Harmon G., Edwards J., Latreille P., Courtney L., Cloud J., Abbott A., Scott K., Johnson D., Minx P., Bentley D., Fulton B., Miller N., Greco T., Kemp K., Kramer J., Fulton L., Mardis E., Dante M., Pepin K., Hillier L.W., Nelson J., Spieth J., Ryan E., Andrews S., Geisel C., Layman D., Du H., Ali J., Berghoff A., Jones K., Drone K., Cotton M., Joshu C., Antonoiu B., Zidanic M., Strong C., Sun H., Lamar B., Yordan C., Ma P., Zhong J., Preston R., Vil D., Shekher M., Matero A., Shah R., Swaby I.K., O'Shaughnessy A., Rodriguez M., Hoffman J., Till S., Granat S., Shohdy N., Hasegawa A., Hameed A., Lodhi M., Johnson A., Chen E., Marra M.A., Martienssen R., McCombie W.R.
    Nature 402:769-777(1998) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: cv. Columbia.
  2. The Arabidopsis Information Resource (TAIR)
    Submitted (MAR-2011) to the EMBL/GenBank/DDBJ databases
    Cited for: GENOME REANNOTATION.
    Strain: cv. Columbia.
  3. "Empirical analysis of transcriptional activity in the Arabidopsis genome."
    Yamada K., Lim J., Dale J.M., Chen H., Shinn P., Palm C.J., Southwick A.M., Wu H.C., Kim C.J., Nguyen M., Pham P.K., Cheuk R.F., Karlin-Newmann G., Liu S.X., Lam B., Sakano H., Wu T., Yu G.
    , Miranda M., Quach H.L., Tripp M., Chang C.H., Lee J.M., Toriumi M.J., Chan M.M., Tang C.C., Onodera C.S., Deng J.M., Akiyama K., Ansari Y., Arakawa T., Banh J., Banno F., Bowser L., Brooks S.Y., Carninci P., Chao Q., Choy N., Enju A., Goldsmith A.D., Gurjal M., Hansen N.F., Hayashizaki Y., Johnson-Hopson C., Hsuan V.W., Iida K., Karnes M., Khan S., Koesema E., Ishida J., Jiang P.X., Jones T., Kawai J., Kamiya A., Meyers C., Nakajima M., Narusaka M., Seki M., Sakurai T., Satou M., Tamse R., Vaysberg M., Wallender E.K., Wong C., Yamamura Y., Yuan S., Shinozaki K., Davis R.W., Theologis A., Ecker J.R.
    Science 302:842-846(2002) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
    Strain: cv. Columbia.
  4. "A superfamily of proteins with novel cysteine-rich repeats."
    Chen Z.
    Plant Physiol. 126:473-476(2000) [PubMed] [Europe PMC] [Abstract]
    Cited for: GENE FAMILY ORGANIZATION, NOMENCLATURE.
  5. "Identification of NPR1-dependent and independent genes early induced by salicylic acid treatment in Arabidopsis."
    Blanco F., Garreton V., Frey N., Dominguez C., Perez-Acle T., van der Straeten D., Jordana X., Holuigue L.
    Plant Mol. Biol. 59:927-944(2004) [PubMed] [Europe PMC] [Abstract]
    Cited for: INDUCTION.

Entry informationi

Entry nameiCRK9_ARATH
AccessioniPrimary (citable) accession number: O65469
Entry historyi
Integrated into UniProtKB/Swiss-Prot: July 10, 2007
Last sequence update: August 1, 1998
Last modified: February 4, 2015
This is version 80 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programPlant Protein Annotation Program

Miscellaneousi

Caution

Lacks the transmembrane and the protein kinase domains, which are conserved features of the CRK subfamily.Curated
Could be the product of a pseudogene.Curated

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Arabidopsis thaliana
    Arabidopsis thaliana: entries and gene names
  2. SIMILARITY comments
    Index of protein domains and families

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.