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O65469 (CRK9_ARATH) Reviewed, UniProtKB/Swiss-Prot

Last modified May 14, 2014. Version 77. Feed History...

Clusters with 100%, 90%, 50% identity | Documents (2) | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info·DocumentsCustomize order

Names and origin

Protein namesRecommended name:
Putative cysteine-rich receptor-like protein kinase 9

Short name=Cysteine-rich RLK9
Gene names
Name:CRK9
Synonyms:EP1
Ordered Locus Names:At4g23170
ORF Names:F21P8.60
OrganismArabidopsis thaliana (Mouse-ear cress) [Reference proteome]
Taxonomic identifier3702 [NCBI]
Taxonomic lineageEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaeudicotyledonsGunneridaePentapetalaerosidsmalvidsBrassicalesBrassicaceaeCamelineaeArabidopsis

Protein attributes

Sequence length265 AA.
Sequence statusComplete.
Sequence processingThe displayed sequence is further processed into a mature form.
Protein existenceUncertain

General annotation (Comments)

Subcellular location

Secreted Potential.

Induction

By salicylic acid (SA). Ref.5

Sequence similarities

Belongs to the protein kinase superfamily. Ser/Thr protein kinase family. CRK subfamily.

Contains 2 Gnk2-homologous domains.

Caution

Lacks the transmembrane and the protein kinase domains, which are conserved features of the CRK subfamily.

Could be the product of a pseudogene.

Ontologies

Keywords
   Cellular componentSecreted
   DomainRepeat
Signal
   Molecular functionReceptor
   PTMGlycoprotein
   Technical termComplete proteome
Reference proteome
Gene Ontology (GO)
   Biological_processprogrammed cell death

Inferred from mutant phenotype PubMed 15604743. Source: TAIR

response to salicylic acid

Inferred from expression pattern Ref.5. Source: TAIR

   Cellular_componentapoplast

Inferred from direct assay PubMed 18538804. Source: TAIR

Complete GO annotation...

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Signal peptide1 – 2323 Potential
Chain24 – 265242Putative cysteine-rich receptor-like protein kinase 9
PRO_0000295056

Regions

Domain27 – 131105Gnk2-homologous 1
Domain142 – 244103Gnk2-homologous 2
Compositional bias253 – 2619Poly-Pro

Amino acid modifications

Glycosylation351N-linked (GlcNAc...) Potential
Glycosylation601N-linked (GlcNAc...) Potential
Glycosylation691N-linked (GlcNAc...) Potential
Glycosylation1531N-linked (GlcNAc...) Potential
Glycosylation1771N-linked (GlcNAc...) Potential
Glycosylation2461N-linked (GlcNAc...) Potential

Sequences

Sequence LengthMass (Da)Tools
O65469 [UniParc].

Last modified August 1, 1998. Version 1.
Checksum: 0404A61E511031F4

FASTA26529,722
        10         20         30         40         50         60 
MSSLISFIFL FLFSFLTSFK ASAQDPFYLN HYCPNTTTYS RFSTYSTNLR TLLSSFASRN 

        70         80         90        100        110        120 
ASYSTGFQNV TVGQTPDLVT GLFLCRGDLS PEVCSNCVAF SVDEALTRCP SQREAVFYYE 

       130        140        150        160        170        180 
ECILRYSDKN ILSTAITNEG EFILSNTNTI SPNQSQINQF IVLVQSNMNQ AAMEAANSSR 

       190        200        210        220        230        240 
KFSTIKTELT ELQTLYGLVQ CTPDLTSQDC LRCLTRSINR MPLSRIGARQ FWPSCNSRYE 

       250        260 
LYSFYNETTI GTPSPPPPPS PSRAN 

« Hide

References

« Hide 'large scale' references
[1]"Sequence and analysis of chromosome 4 of the plant Arabidopsis thaliana."
Mayer K.F.X., Schueller C., Wambutt R., Murphy G., Volckaert G., Pohl T., Duesterhoeft A., Stiekema W., Entian K.-D., Terryn N., Harris B., Ansorge W., Brandt P., Grivell L.A., Rieger M., Weichselgartner M., de Simone V., Obermaier B. expand/collapse author list , Mache R., Mueller M., Kreis M., Delseny M., Puigdomenech P., Watson M., Schmidtheini T., Reichert B., Portetelle D., Perez-Alonso M., Boutry M., Bancroft I., Vos P., Hoheisel J., Zimmermann W., Wedler H., Ridley P., Langham S.-A., McCullagh B., Bilham L., Robben J., van der Schueren J., Grymonprez B., Chuang Y.-J., Vandenbussche F., Braeken M., Weltjens I., Voet M., Bastiaens I., Aert R., Defoor E., Weitzenegger T., Bothe G., Ramsperger U., Hilbert H., Braun M., Holzer E., Brandt A., Peters S., van Staveren M., Dirkse W., Mooijman P., Klein Lankhorst R., Rose M., Hauf J., Koetter P., Berneiser S., Hempel S., Feldpausch M., Lamberth S., Van den Daele H., De Keyser A., Buysshaert C., Gielen J., Villarroel R., De Clercq R., van Montagu M., Rogers J., Cronin A., Quail M.A., Bray-Allen S., Clark L., Doggett J., Hall S., Kay M., Lennard N., McLay K., Mayes R., Pettett A., Rajandream M.A., Lyne M., Benes V., Rechmann S., Borkova D., Bloecker H., Scharfe M., Grimm M., Loehnert T.-H., Dose S., de Haan M., Maarse A.C., Schaefer M., Mueller-Auer S., Gabel C., Fuchs M., Fartmann B., Granderath K., Dauner D., Herzl A., Neumann S., Argiriou A., Vitale D., Liguori R., Piravandi E., Massenet O., Quigley F., Clabauld G., Muendlein A., Felber R., Schnabl S., Hiller R., Schmidt W., Lecharny A., Aubourg S., Chefdor F., Cooke R., Berger C., Monfort A., Casacuberta E., Gibbons T., Weber N., Vandenbol M., Bargues M., Terol J., Torres A., Perez-Perez A., Purnelle B., Bent E., Johnson S., Tacon D., Jesse T., Heijnen L., Schwarz S., Scholler P., Heber S., Francs P., Bielke C., Frishman D., Haase D., Lemcke K., Mewes H.-W., Stocker S., Zaccaria P., Bevan M., Wilson R.K., de la Bastide M., Habermann K., Parnell L., Dedhia N., Gnoj L., Schutz K., Huang E., Spiegel L., Sekhon M., Murray J., Sheet P., Cordes M., Abu-Threideh J., Stoneking T., Kalicki J., Graves T., Harmon G., Edwards J., Latreille P., Courtney L., Cloud J., Abbott A., Scott K., Johnson D., Minx P., Bentley D., Fulton B., Miller N., Greco T., Kemp K., Kramer J., Fulton L., Mardis E., Dante M., Pepin K., Hillier L.W., Nelson J., Spieth J., Ryan E., Andrews S., Geisel C., Layman D., Du H., Ali J., Berghoff A., Jones K., Drone K., Cotton M., Joshu C., Antonoiu B., Zidanic M., Strong C., Sun H., Lamar B., Yordan C., Ma P., Zhong J., Preston R., Vil D., Shekher M., Matero A., Shah R., Swaby I.K., O'Shaughnessy A., Rodriguez M., Hoffman J., Till S., Granat S., Shohdy N., Hasegawa A., Hameed A., Lodhi M., Johnson A., Chen E., Marra M.A., Martienssen R., McCombie W.R.
Nature 402:769-777(1999) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: cv. Columbia.
[2]The Arabidopsis Information Resource (TAIR)
Submitted (APR-2011) to the EMBL/GenBank/DDBJ databases
Cited for: GENOME REANNOTATION.
Strain: cv. Columbia.
[3]"Empirical analysis of transcriptional activity in the Arabidopsis genome."
Yamada K., Lim J., Dale J.M., Chen H., Shinn P., Palm C.J., Southwick A.M., Wu H.C., Kim C.J., Nguyen M., Pham P.K., Cheuk R.F., Karlin-Newmann G., Liu S.X., Lam B., Sakano H., Wu T., Yu G. expand/collapse author list , Miranda M., Quach H.L., Tripp M., Chang C.H., Lee J.M., Toriumi M.J., Chan M.M., Tang C.C., Onodera C.S., Deng J.M., Akiyama K., Ansari Y., Arakawa T., Banh J., Banno F., Bowser L., Brooks S.Y., Carninci P., Chao Q., Choy N., Enju A., Goldsmith A.D., Gurjal M., Hansen N.F., Hayashizaki Y., Johnson-Hopson C., Hsuan V.W., Iida K., Karnes M., Khan S., Koesema E., Ishida J., Jiang P.X., Jones T., Kawai J., Kamiya A., Meyers C., Nakajima M., Narusaka M., Seki M., Sakurai T., Satou M., Tamse R., Vaysberg M., Wallender E.K., Wong C., Yamamura Y., Yuan S., Shinozaki K., Davis R.W., Theologis A., Ecker J.R.
Science 302:842-846(2003) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
Strain: cv. Columbia.
[4]"A superfamily of proteins with novel cysteine-rich repeats."
Chen Z.
Plant Physiol. 126:473-476(2001) [PubMed] [Europe PMC] [Abstract]
Cited for: GENE FAMILY ORGANIZATION, NOMENCLATURE.
[5]"Identification of NPR1-dependent and independent genes early induced by salicylic acid treatment in Arabidopsis."
Blanco F., Garreton V., Frey N., Dominguez C., Perez-Acle T., van der Straeten D., Jordana X., Holuigue L.
Plant Mol. Biol. 59:927-944(2005) [PubMed] [Europe PMC] [Abstract]
Cited for: INDUCTION.
+Additional computationally mapped references.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
AL022347 Genomic DNA. Translation: CAA18464.1.
AL161558 Genomic DNA. Translation: CAB79272.1.
CP002687 Genomic DNA. Translation: AEE84718.1.
BT002377 mRNA. Translation: AAO00737.1.
BT006299 mRNA. Translation: AAP13407.1.
PIRT04834.
RefSeqNP_194048.1. NM_118446.2.
UniGeneAt.2195.

3D structure databases

ProteinModelPortalO65469.
SMRO65469. Positions 158-244.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

IntActO65469. 8 interactions.
STRING3702.AT4G23170.1-P.

Proteomic databases

PaxDbO65469.
PRIDEO65469.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblPlantsAT4G23170.1; AT4G23170.1; AT4G23170.
GeneID828416.
KEGGath:AT4G23170.

Organism-specific databases

GeneFarm577. 92.
TAIRAT4G23170.

Phylogenomic databases

eggNOGNOG306321.
HOGENOMHOG000116552.
InParanoidO65469.
OMAFKASAQD.
PhylomeDBO65469.

Gene expression databases

GenevestigatorO65469.

Family and domain databases

InterProIPR002902. GNK2.
[Graphical view]
PfamPF01657. Stress-antifung. 2 hits.
[Graphical view]
PROSITEPS51473. GNK2. 2 hits.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameCRK9_ARATH
AccessionPrimary (citable) accession number: O65469
Entry history
Integrated into UniProtKB/Swiss-Prot: July 10, 2007
Last sequence update: August 1, 1998
Last modified: May 14, 2014
This is version 77 of the entry and version 1 of the sequence. [Complete history]
Entry statusReviewed (UniProtKB/Swiss-Prot)
Annotation programPlant Protein Annotation Program

Relevant documents

SIMILARITY comments

Index of protein domains and families

Arabidopsis thaliana

Arabidopsis thaliana: entries and gene names