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O65469

- CRK9_ARATH

UniProt

O65469 - CRK9_ARATH

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Protein
Putative cysteine-rich receptor-like protein kinase 9
Gene
CRK9, EP1, At4g23170, F21P8.60
Organism
Arabidopsis thaliana (Mouse-ear cress)
Status
Reviewed - Annotation score: 3 out of 5 - Protein uncertaini

Functioni

GO - Biological processi

  1. programmed cell death Source: TAIR
  2. response to salicylic acid Source: TAIR
Complete GO annotation...

Keywords - Molecular functioni

Receptor

Names & Taxonomyi

Protein namesi
Recommended name:
Putative cysteine-rich receptor-like protein kinase 9
Short name:
Cysteine-rich RLK9
Gene namesi
Name:CRK9
Synonyms:EP1
Ordered Locus Names:At4g23170
ORF Names:F21P8.60
OrganismiArabidopsis thaliana (Mouse-ear cress)
Taxonomic identifieri3702 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaeudicotyledonsGunneridaePentapetalaerosidsmalvidsBrassicalesBrassicaceaeCamelineaeArabidopsis
ProteomesiUP000006548: Chromosome 4

Organism-specific databases

TAIRiAT4G23170.

Subcellular locationi

Secreted Reviewed prediction

GO - Cellular componenti

  1. apoplast Source: TAIR
Complete GO annotation...

Keywords - Cellular componenti

Secreted

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Signal peptidei1 – 2323 Reviewed prediction
Add
BLAST
Chaini24 – 265242Putative cysteine-rich receptor-like protein kinase 9
PRO_0000295056Add
BLAST

Amino acid modifications

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Glycosylationi35 – 351N-linked (GlcNAc...) Reviewed prediction
Glycosylationi60 – 601N-linked (GlcNAc...) Reviewed prediction
Glycosylationi69 – 691N-linked (GlcNAc...) Reviewed prediction
Glycosylationi153 – 1531N-linked (GlcNAc...) Reviewed prediction
Glycosylationi177 – 1771N-linked (GlcNAc...) Reviewed prediction
Glycosylationi246 – 2461N-linked (GlcNAc...) Reviewed prediction

Keywords - PTMi

Glycoprotein

Proteomic databases

PaxDbiO65469.
PRIDEiO65469.

Expressioni

Inductioni

By salicylic acid (SA).1 Publication

Gene expression databases

GenevestigatoriO65469.

Interactioni

Protein-protein interaction databases

IntActiO65469. 8 interactions.
STRINGi3702.AT4G23170.1-P.

Structurei

3D structure databases

ProteinModelPortaliO65469.
SMRiO65469. Positions 158-244.

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Domaini27 – 131105Gnk2-homologous 1
Add
BLAST
Domaini142 – 244103Gnk2-homologous 2
Add
BLAST

Compositional bias

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Compositional biasi253 – 2619Poly-Pro

Sequence similaritiesi

Keywords - Domaini

Repeat, Signal

Phylogenomic databases

eggNOGiNOG306321.
HOGENOMiHOG000116552.
InParanoidiO65469.
OMAiFKASAQD.
PhylomeDBiO65469.

Family and domain databases

InterProiIPR002902. GNK2.
[Graphical view]
PfamiPF01657. Stress-antifung. 2 hits.
[Graphical view]
PROSITEiPS51473. GNK2. 2 hits.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Sequence processingi: The displayed sequence is further processed into a mature form.

O65469-1 [UniParc]FASTAAdd to Basket

« Hide

MSSLISFIFL FLFSFLTSFK ASAQDPFYLN HYCPNTTTYS RFSTYSTNLR    50
TLLSSFASRN ASYSTGFQNV TVGQTPDLVT GLFLCRGDLS PEVCSNCVAF 100
SVDEALTRCP SQREAVFYYE ECILRYSDKN ILSTAITNEG EFILSNTNTI 150
SPNQSQINQF IVLVQSNMNQ AAMEAANSSR KFSTIKTELT ELQTLYGLVQ 200
CTPDLTSQDC LRCLTRSINR MPLSRIGARQ FWPSCNSRYE LYSFYNETTI 250
GTPSPPPPPS PSRAN 265
Length:265
Mass (Da):29,722
Last modified:August 1, 1998 - v1
Checksum:i0404A61E511031F4
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
AL022347 Genomic DNA. Translation: CAA18464.1.
AL161558 Genomic DNA. Translation: CAB79272.1.
CP002687 Genomic DNA. Translation: AEE84718.1.
BT002377 mRNA. Translation: AAO00737.1.
BT006299 mRNA. Translation: AAP13407.1.
PIRiT04834.
RefSeqiNP_194048.1. NM_118446.2.
UniGeneiAt.2195.

Genome annotation databases

EnsemblPlantsiAT4G23170.1; AT4G23170.1; AT4G23170.
GeneIDi828416.
KEGGiath:AT4G23170.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
AL022347 Genomic DNA. Translation: CAA18464.1 .
AL161558 Genomic DNA. Translation: CAB79272.1 .
CP002687 Genomic DNA. Translation: AEE84718.1 .
BT002377 mRNA. Translation: AAO00737.1 .
BT006299 mRNA. Translation: AAP13407.1 .
PIRi T04834.
RefSeqi NP_194048.1. NM_118446.2.
UniGenei At.2195.

3D structure databases

ProteinModelPortali O65469.
SMRi O65469. Positions 158-244.
ModBasei Search...
MobiDBi Search...

Protein-protein interaction databases

IntActi O65469. 8 interactions.
STRINGi 3702.AT4G23170.1-P.

Proteomic databases

PaxDbi O65469.
PRIDEi O65469.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblPlantsi AT4G23170.1 ; AT4G23170.1 ; AT4G23170 .
GeneIDi 828416.
KEGGi ath:AT4G23170.

Organism-specific databases

GeneFarmi 577. 92.
TAIRi AT4G23170.

Phylogenomic databases

eggNOGi NOG306321.
HOGENOMi HOG000116552.
InParanoidi O65469.
OMAi FKASAQD.
PhylomeDBi O65469.

Gene expression databases

Genevestigatori O65469.

Family and domain databases

InterProi IPR002902. GNK2.
[Graphical view ]
Pfami PF01657. Stress-antifung. 2 hits.
[Graphical view ]
PROSITEi PS51473. GNK2. 2 hits.
[Graphical view ]
ProtoNeti Search...

Publicationsi

« Hide 'large scale' publications
  1. "Sequence and analysis of chromosome 4 of the plant Arabidopsis thaliana."
    Mayer K.F.X., Schueller C., Wambutt R., Murphy G., Volckaert G., Pohl T., Duesterhoeft A., Stiekema W., Entian K.-D., Terryn N., Harris B., Ansorge W., Brandt P., Grivell L.A., Rieger M., Weichselgartner M., de Simone V., Obermaier B.
    , Mache R., Mueller M., Kreis M., Delseny M., Puigdomenech P., Watson M., Schmidtheini T., Reichert B., Portetelle D., Perez-Alonso M., Boutry M., Bancroft I., Vos P., Hoheisel J., Zimmermann W., Wedler H., Ridley P., Langham S.-A., McCullagh B., Bilham L., Robben J., van der Schueren J., Grymonprez B., Chuang Y.-J., Vandenbussche F., Braeken M., Weltjens I., Voet M., Bastiaens I., Aert R., Defoor E., Weitzenegger T., Bothe G., Ramsperger U., Hilbert H., Braun M., Holzer E., Brandt A., Peters S., van Staveren M., Dirkse W., Mooijman P., Klein Lankhorst R., Rose M., Hauf J., Koetter P., Berneiser S., Hempel S., Feldpausch M., Lamberth S., Van den Daele H., De Keyser A., Buysshaert C., Gielen J., Villarroel R., De Clercq R., van Montagu M., Rogers J., Cronin A., Quail M.A., Bray-Allen S., Clark L., Doggett J., Hall S., Kay M., Lennard N., McLay K., Mayes R., Pettett A., Rajandream M.A., Lyne M., Benes V., Rechmann S., Borkova D., Bloecker H., Scharfe M., Grimm M., Loehnert T.-H., Dose S., de Haan M., Maarse A.C., Schaefer M., Mueller-Auer S., Gabel C., Fuchs M., Fartmann B., Granderath K., Dauner D., Herzl A., Neumann S., Argiriou A., Vitale D., Liguori R., Piravandi E., Massenet O., Quigley F., Clabauld G., Muendlein A., Felber R., Schnabl S., Hiller R., Schmidt W., Lecharny A., Aubourg S., Chefdor F., Cooke R., Berger C., Monfort A., Casacuberta E., Gibbons T., Weber N., Vandenbol M., Bargues M., Terol J., Torres A., Perez-Perez A., Purnelle B., Bent E., Johnson S., Tacon D., Jesse T., Heijnen L., Schwarz S., Scholler P., Heber S., Francs P., Bielke C., Frishman D., Haase D., Lemcke K., Mewes H.-W., Stocker S., Zaccaria P., Bevan M., Wilson R.K., de la Bastide M., Habermann K., Parnell L., Dedhia N., Gnoj L., Schutz K., Huang E., Spiegel L., Sekhon M., Murray J., Sheet P., Cordes M., Abu-Threideh J., Stoneking T., Kalicki J., Graves T., Harmon G., Edwards J., Latreille P., Courtney L., Cloud J., Abbott A., Scott K., Johnson D., Minx P., Bentley D., Fulton B., Miller N., Greco T., Kemp K., Kramer J., Fulton L., Mardis E., Dante M., Pepin K., Hillier L.W., Nelson J., Spieth J., Ryan E., Andrews S., Geisel C., Layman D., Du H., Ali J., Berghoff A., Jones K., Drone K., Cotton M., Joshu C., Antonoiu B., Zidanic M., Strong C., Sun H., Lamar B., Yordan C., Ma P., Zhong J., Preston R., Vil D., Shekher M., Matero A., Shah R., Swaby I.K., O'Shaughnessy A., Rodriguez M., Hoffman J., Till S., Granat S., Shohdy N., Hasegawa A., Hameed A., Lodhi M., Johnson A., Chen E., Marra M.A., Martienssen R., McCombie W.R.
    Nature 402:769-777(1999) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: cv. Columbia.
  2. The Arabidopsis Information Resource (TAIR)
    Submitted (APR-2011) to the EMBL/GenBank/DDBJ databases
    Cited for: GENOME REANNOTATION.
    Strain: cv. Columbia.
  3. "Empirical analysis of transcriptional activity in the Arabidopsis genome."
    Yamada K., Lim J., Dale J.M., Chen H., Shinn P., Palm C.J., Southwick A.M., Wu H.C., Kim C.J., Nguyen M., Pham P.K., Cheuk R.F., Karlin-Newmann G., Liu S.X., Lam B., Sakano H., Wu T., Yu G.
    , Miranda M., Quach H.L., Tripp M., Chang C.H., Lee J.M., Toriumi M.J., Chan M.M., Tang C.C., Onodera C.S., Deng J.M., Akiyama K., Ansari Y., Arakawa T., Banh J., Banno F., Bowser L., Brooks S.Y., Carninci P., Chao Q., Choy N., Enju A., Goldsmith A.D., Gurjal M., Hansen N.F., Hayashizaki Y., Johnson-Hopson C., Hsuan V.W., Iida K., Karnes M., Khan S., Koesema E., Ishida J., Jiang P.X., Jones T., Kawai J., Kamiya A., Meyers C., Nakajima M., Narusaka M., Seki M., Sakurai T., Satou M., Tamse R., Vaysberg M., Wallender E.K., Wong C., Yamamura Y., Yuan S., Shinozaki K., Davis R.W., Theologis A., Ecker J.R.
    Science 302:842-846(2003) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
    Strain: cv. Columbia.
  4. "A superfamily of proteins with novel cysteine-rich repeats."
    Chen Z.
    Plant Physiol. 126:473-476(2001) [PubMed] [Europe PMC] [Abstract]
    Cited for: GENE FAMILY ORGANIZATION, NOMENCLATURE.
  5. "Identification of NPR1-dependent and independent genes early induced by salicylic acid treatment in Arabidopsis."
    Blanco F., Garreton V., Frey N., Dominguez C., Perez-Acle T., van der Straeten D., Jordana X., Holuigue L.
    Plant Mol. Biol. 59:927-944(2005) [PubMed] [Europe PMC] [Abstract]
    Cited for: INDUCTION.

Entry informationi

Entry nameiCRK9_ARATH
AccessioniPrimary (citable) accession number: O65469
Entry historyi
Integrated into UniProtKB/Swiss-Prot: July 10, 2007
Last sequence update: August 1, 1998
Last modified: May 14, 2014
This is version 77 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programPlant Protein Annotation Program

Miscellaneousi

Caution

Lacks the transmembrane and the protein kinase domains, which are conserved features of the CRK subfamily.
Could be the product of a pseudogene.

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Arabidopsis thaliana
    Arabidopsis thaliana: entries and gene names
  2. SIMILARITY comments
    Index of protein domains and families

External Data

Dasty 3

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