Skip Header

You are using a version of browser that may not display all the features of this website. Please consider upgrading your browser.
Protein

Probable germin-like protein subfamily 2 member 5

Gene

At5g26700

Organism
Arabidopsis thaliana (Mouse-ear cress)
Status
Reviewed-Annotation score: -Experimental evidence at transcript leveli

Functioni

May play a role in plant defense. Probably has no oxalate oxidase activity even if the active site is conserved.

Sites

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Metal bindingi106ManganeseBy similarity1
Metal bindingi108ManganeseBy similarity1
Metal bindingi113ManganeseBy similarity1
Metal bindingi152ManganeseBy similarity1

GO - Molecular functioni

GO - Biological processi

Keywordsi

LigandManganese, Metal-binding

Names & Taxonomyi

Protein namesi
Recommended name:
Probable germin-like protein subfamily 2 member 5
Gene namesi
Ordered Locus Names:At5g26700
ORF Names:F21E10.2
OrganismiArabidopsis thaliana (Mouse-ear cress)
Taxonomic identifieri3702 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaeudicotyledonsGunneridaePentapetalaerosidsmalvidsBrassicalesBrassicaceaeCamelineaeArabidopsis
Proteomesi
  • UP000006548 Componenti: Chromosome 5

Organism-specific databases

AraportiAT5G26700
TAIRilocus:2146759 AT5G26700

Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cell wall Cytoskeleton Vacuole Chloroplast Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertion Graphics by Christian Stolte; Source: COMPARTMENTS

Keywords - Cellular componenti

Apoplast, Secreted

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Signal peptidei1 – 22Sequence analysisAdd BLAST22
ChainiPRO_000001082523 – 213Probable germin-like protein subfamily 2 member 5Add BLAST191

Amino acid modifications

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Disulfide bondi29 ↔ 44By similarity
Glycosylationi67N-linked (GlcNAc...) asparagineSequence analysis1

Keywords - PTMi

Disulfide bond, Glycoprotein

Proteomic databases

PaxDbiO65252

Expressioni

Gene expression databases

ExpressionAtlasiO65252 baseline and differential
GenevisibleiO65252 AT

Interactioni

Subunit structurei

Oligomer (believed to be a pentamer but probably hexamer).By similarity

Protein-protein interaction databases

STRINGi3702.AT5G26700.1

Structurei

3D structure databases

ProteinModelPortaliO65252
SMRiO65252
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the germin family.Curated

Keywords - Domaini

Signal

Phylogenomic databases

eggNOGiENOG410J8F7 Eukaryota
ENOG410Y41R LUCA
InParanoidiO65252
OMAiCKDSTQI
OrthoDBiEOG09360LVG
PhylomeDBiO65252

Family and domain databases

Gene3Di2.60.120.10, 1 hit
InterProiView protein in InterPro
IPR006045 Cupin_1
IPR001929 Germin
IPR019780 Germin_Mn-BS
IPR014710 RmlC-like_jellyroll
IPR011051 RmlC_Cupin_sf
PfamiView protein in Pfam
PF00190 Cupin_1, 1 hit
PRINTSiPR00325 GERMIN
SMARTiView protein in SMART
SM00835 Cupin_1, 1 hit
SUPFAMiSSF51182 SSF51182, 1 hit
PROSITEiView protein in PROSITE
PS00725 GERMIN, 1 hit

Sequencei

Sequence statusi: Complete.

Sequence processingi: The displayed sequence is further processed into a mature form.

O65252-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MASFATHLVV VVTMLFVAMA SAEMLQDVCV ADLSNAVKVN GYTCKDSTQI
60 70 80 90 100
TPEDFYFKGL ANIAATNTST GSVVTGANVE KLPGLNTLGL SMSRIDYAPN
110 120 130 140 150
GLNPPHVHPR ASEIIFVLEG QLYVGFVTTA GKLIAKNLNK GDVFTFPKGL
160 170 180 190 200
IHFQKNIANS PASVLAAFDS QLPGTQSLVA SLFGALPDDI LAKSFQLKHK
210
QVKKIKLRYA PKK
Length:213
Mass (Da):22,812
Last modified:August 29, 2001 - v2
Checksum:i87A690E437705EC1
GO

Sequence cautioni

The sequence AAC13591 differs from that shown. Reason: Erroneous gene model prediction.Curated

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AF058914 Genomic DNA Translation: AAC13591.1 Sequence problems.
CP002688 Genomic DNA Translation: AED93574.1
BT005231 mRNA Translation: AAO63295.1
PIRiT01199
RefSeqiNP_850875.1, NM_180544.2
UniGeneiAt.49067
At.71213

Genome annotation databases

EnsemblPlantsiAT5G26700.1; AT5G26700.1; AT5G26700
GeneIDi832719
GrameneiAT5G26700.1; AT5G26700.1; AT5G26700
KEGGiath:AT5G26700

Similar proteinsi

Entry informationi

Entry nameiGL25_ARATH
AccessioniPrimary (citable) accession number: O65252
Entry historyiIntegrated into UniProtKB/Swiss-Prot: August 29, 2001
Last sequence update: August 29, 2001
Last modified: April 25, 2018
This is version 127 of the entry and version 2 of the sequence. See complete history.
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programPlant Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Arabidopsis thaliana
    Arabidopsis thaliana: entries and gene names
  2. SIMILARITY comments
    Index of protein domains and families

Cookie policy

We would like to use anonymized google analytics cookies to gather statistics on how uniprot.org is used in aggregate. Learn more

UniProt is an ELIXIR core data resource
Main funding by: National Institutes of Health