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Protein

RNA polymerase II transcriptional coactivator KELP

Gene

KELP

Organism
Arabidopsis thaliana (Mouse-ear cress)
Status
Reviewed-Annotation score: -Experimental evidence at protein leveli

Functioni

General coactivator that functions cooperatively with TAFs and mediates functional interactions between upstream activators and the general transcriptional machinery. Binds single-stranded DNA (By similarity).By similarity

GO - Molecular functioni

GO - Biological processi

Keywordsi

Molecular functionActivator, DNA-binding
Biological processTranscription, Transcription regulation

Names & Taxonomyi

Protein namesi
Recommended name:
RNA polymerase II transcriptional coactivator KELP
Gene namesi
Name:KELP
Ordered Locus Names:At4g10920
ORF Names:F25I24.130, F8M12.6
OrganismiArabidopsis thaliana (Mouse-ear cress)
Taxonomic identifieri3702 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaeudicotyledonsGunneridaePentapetalaerosidsmalvidsBrassicalesBrassicaceaeCamelineaeArabidopsis
Proteomesi
  • UP000006548 Componenti: Chromosome 4

Organism-specific databases

AraportiAT4G10920
TAIRilocus:2123416 AT4G10920

Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cell wall Cytoskeleton Vacuole Chloroplast Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertion Graphics by Christian Stolte; Source: COMPARTMENTS

Keywords - Cellular componenti

Nucleus

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_00002159481 – 165RNA polymerase II transcriptional coactivator KELPAdd BLAST165

Proteomic databases

PaxDbiO65155

PTM databases

iPTMnetiO65155

Expressioni

Gene expression databases

ExpressionAtlasiO65155 baseline and differential
GenevisibleiO65155 AT

Interactioni

Binary interactionsi

WithEntry#Exp.IntActNotes
KIWIO651549EBI-2112322,EBI-2112286

Protein-protein interaction databases

BioGridi119891 interactor.
IntActiO65155 5 interactors.
STRINGi3702.AT4G10920.1

Structurei

3D structure databases

ProteinModelPortaliO65155
SMRiO65155
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Phylogenomic databases

eggNOGiKOG2712 Eukaryota
ENOG410XUB8 LUCA
HOGENOMiHOG000238208
InParanoidiO65155
OMAiWSALKKN
OrthoDBiEOG09360S54
PhylomeDBiO65155

Family and domain databases

Gene3Di2.30.31.101 hit
InterProiView protein in InterPro
IPR014876 DEK_C
IPR017415 KELP
IPR003173 PC4
IPR009044 ssDNA-bd_transcriptional_reg
PfamiView protein in Pfam
PF08766 DEK_C, 1 hit
PF02229 PC4, 1 hit
PIRSFiPIRSF038156 RNA_pol_II_KELP, 1 hit
SUPFAMiSSF54447 SSF54447, 1 hit

Sequencei

Sequence statusi: Complete.

O65155-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MEKETKEKIE KTVIEILSES DMKEITEFKV RKLASEKLAI DLSEKSHKAF
60 70 80 90 100
VRSVVEKFLD EERAREYENS QVNKEEEDGD KDCGKGNKEF DDDGDLIICR
110 120 130 140 150
LSDKRRVTIQ EFKGKSLVSI REYYKKDGKE LPTSKGISLT DEQWSTFKKN
160
MPAIENAVKK MESRV
Length:165
Mass (Da):19,177
Last modified:August 1, 1998 - v1
Checksum:i6620F1693D40D3D1
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AF053303 mRNA Translation: AAC08575.1
AF080118 Genomic DNA Translation: AAC33951.1
AL049525 Genomic DNA Translation: CAB40060.1
AL161518 Genomic DNA Translation: CAB81193.1
CP002687 Genomic DNA Translation: AEE82943.1
CP002687 Genomic DNA Translation: AEE82944.1
AY085896 mRNA Translation: AAM63108.1
BT005847 mRNA Translation: AAO64782.1
PIRiT52114
RefSeqiNP_001078372.1, NM_001084903.1
NP_192830.1, NM_117160.4
UniGeneiAt.21693

Genome annotation databases

EnsemblPlantsiAT4G10920.1; AT4G10920.1; AT4G10920
AT4G10920.2; AT4G10920.2; AT4G10920
GeneIDi826690
GrameneiAT4G10920.1; AT4G10920.1; AT4G10920
AT4G10920.2; AT4G10920.2; AT4G10920
KEGGiath:AT4G10920

Similar proteinsi

Entry informationi

Entry nameiKELP_ARATH
AccessioniPrimary (citable) accession number: O65155
Entry historyiIntegrated into UniProtKB/Swiss-Prot: September 26, 2003
Last sequence update: August 1, 1998
Last modified: April 25, 2018
This is version 120 of the entry and version 1 of the sequence. See complete history.
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programPlant Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome