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Protein

RNA polymerase II transcriptional coactivator KELP

Gene

KELP

Organism
Arabidopsis thaliana (Mouse-ear cress)
Status
Reviewed-Annotation score: Annotation score: 2 out of 5-Experimental evidence at protein leveli

Functioni

General coactivator that functions cooperatively with TAFs and mediates functional interactions between upstream activators and the general transcriptional machinery. Binds single-stranded DNA (By similarity).By similarity

GO - Molecular functioni

GO - Biological processi

Keywordsi

Molecular functionActivator, DNA-binding
Biological processTranscription, Transcription regulation

Names & Taxonomyi

Protein namesi
Recommended name:
RNA polymerase II transcriptional coactivator KELP
Gene namesi
Name:KELP
Ordered Locus Names:At4g10920
ORF Names:F25I24.130, F8M12.6
OrganismiArabidopsis thaliana (Mouse-ear cress)
Taxonomic identifieri3702 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaeudicotyledonsGunneridaePentapetalaerosidsmalvidsBrassicalesBrassicaceaeCamelineaeArabidopsis
Proteomesi
  • UP000006548 Componenti: Chromosome 4

Organism-specific databases

AraportiAT4G10920.
TAIRilocus:2123416. AT4G10920.

Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cell wall Cytoskeleton Vacuole Chloroplast Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertion Graphics by Christian Stolte; Source: COMPARTMENTS

Keywords - Cellular componenti

Nucleus

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_00002159481 – 165RNA polymerase II transcriptional coactivator KELPAdd BLAST165

Proteomic databases

PaxDbiO65155.

PTM databases

iPTMnetiO65155.

Expressioni

Gene expression databases

ExpressionAtlasiO65155. baseline and differential.
GenevisibleiO65155. AT.

Interactioni

Binary interactionsi

WithEntry#Exp.IntActNotes
KIWIO651549EBI-2112322,EBI-2112286

Protein-protein interaction databases

BioGridi11989. 1 interactor.
IntActiO65155. 5 interactors.
STRINGi3702.AT4G10920.1.

Structurei

3D structure databases

ProteinModelPortaliO65155.
SMRiO65155.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Phylogenomic databases

eggNOGiKOG2712. Eukaryota.
ENOG410XUB8. LUCA.
HOGENOMiHOG000238208.
InParanoidiO65155.
OMAiWSALKKN.
OrthoDBiEOG09360S54.
PhylomeDBiO65155.

Family and domain databases

Gene3Di2.30.31.10. 1 hit.
InterProiView protein in InterPro
IPR014876. DEK_C.
IPR017415. KELP.
IPR003173. PC4.
IPR009044. ssDNA-bd_transcriptional_reg.
PfamiView protein in Pfam
PF08766. DEK_C. 1 hit.
PF02229. PC4. 1 hit.
PIRSFiPIRSF038156. RNA_pol_II_KELP. 1 hit.
SUPFAMiSSF54447. SSF54447. 1 hit.

Sequencei

Sequence statusi: Complete.

O65155-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MEKETKEKIE KTVIEILSES DMKEITEFKV RKLASEKLAI DLSEKSHKAF
60 70 80 90 100
VRSVVEKFLD EERAREYENS QVNKEEEDGD KDCGKGNKEF DDDGDLIICR
110 120 130 140 150
LSDKRRVTIQ EFKGKSLVSI REYYKKDGKE LPTSKGISLT DEQWSTFKKN
160
MPAIENAVKK MESRV
Length:165
Mass (Da):19,177
Last modified:August 1, 1998 - v1
Checksum:i6620F1693D40D3D1
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AF053303 mRNA. Translation: AAC08575.1.
AF080118 Genomic DNA. Translation: AAC33951.1.
AL049525 Genomic DNA. Translation: CAB40060.1.
AL161518 Genomic DNA. Translation: CAB81193.1.
CP002687 Genomic DNA. Translation: AEE82943.1.
CP002687 Genomic DNA. Translation: AEE82944.1.
AY085896 mRNA. Translation: AAM63108.1.
BT005847 mRNA. Translation: AAO64782.1.
PIRiT52114.
RefSeqiNP_001078372.1. NM_001084903.1.
NP_192830.1. NM_117160.4.
UniGeneiAt.21693.

Genome annotation databases

EnsemblPlantsiAT4G10920.1; AT4G10920.1; AT4G10920.
AT4G10920.2; AT4G10920.2; AT4G10920.
GeneIDi826690.
GrameneiAT4G10920.1; AT4G10920.1; AT4G10920.
AT4G10920.2; AT4G10920.2; AT4G10920.
KEGGiath:AT4G10920.

Similar proteinsi

Entry informationi

Entry nameiKELP_ARATH
AccessioniPrimary (citable) accession number: O65155
Entry historyiIntegrated into UniProtKB/Swiss-Prot: September 26, 2003
Last sequence update: August 1, 1998
Last modified: September 27, 2017
This is version 119 of the entry and version 1 of the sequence. See complete history.
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programPlant Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Arabidopsis thaliana
    Arabidopsis thaliana: entries and gene names
  2. SIMILARITY comments
    Index of protein domains and families