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Protein
Submitted name:

MADS box protein

Gene

EGM3

Organism
Eucalyptus grandis (Flooded gum)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Experimental evidence at transcript leveli

Functioni

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Biological processi

Transcription, Transcription regulationUniRule annotationSAAS annotation

Keywords - Ligandi

DNA-bindingUniRule annotationSAAS annotation

Names & Taxonomyi

Protein namesi
Submitted name:
MADS box proteinImported
Gene namesi
Name:EGM3Imported
OrganismiEucalyptus grandis (Flooded gum)Imported
Taxonomic identifieri71139 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaeudicotyledonsGunneridaePentapetalaerosidsmalvidsMyrtalesMyrtaceaeMyrtoideaeEucalypteaeEucalyptus

Subcellular locationi

  • Nucleus UniRule annotationSAAS annotation

GO - Cellular componenti

Complete GO annotation...

Keywords - Cellular componenti

NucleusUniRule annotationSAAS annotation

Structurei

3D structure databases

ProteinModelPortaliO64935.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Domaini1 – 6161MADS-boxInterPro annotationAdd
BLAST
Domaini87 – 17791K-boxInterPro annotationAdd
BLAST

Coiled coil

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Coiled coili121 – 14424Sequence analysisAdd
BLAST

Sequence similaritiesi

Contains 1 MADS-box domain.UniRule annotation
Contains K-box domain.SAAS annotation

Keywords - Domaini

Coiled coilSequence analysis

Family and domain databases

InterProiIPR002487. TF_Kbox.
IPR002100. TF_MADSbox.
[Graphical view]
PfamiPF01486. K-box. 1 hit.
PF00319. SRF-TF. 1 hit.
[Graphical view]
PRINTSiPR00404. MADSDOMAIN.
SMARTiSM00432. MADS. 1 hit.
[Graphical view]
SUPFAMiSSF55455. SSF55455. 1 hit.
PROSITEiPS51297. K_BOX. 1 hit.
PS00350. MADS_BOX_1. 1 hit.
PS50066. MADS_BOX_2. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

O64935-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MGRGKVELKR IENKINRQVT FAKRRNGLLK KAYELSVLCD AEVALIIFSN
60 70 80 90 100
RGKLYEFCSS SSMMKTIEKY QKCSYGSLET NCSINEMQNS YQDYLKLKAR
110 120 130 140 150
VEVLQRSQRN PPWEELGPLN SKELEQLEHQ LENSLKQIRS AKTQFMFDQL
160 170 180 190 200
XHLQHKEQML VEANRELWKK LEESNTRIPL RLGWEAEDHN NISYSRLPTQ
210 220 230 240
SQGLIFQPLG GNPTLQIGYN PAGSNELNVS AADQHPNGFI PGWML
Length:245
Mass (Da):28,286
Last modified:August 1, 1998 - v1
Checksum:iF6EAA5FD40C90162
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AF029977 mRNA. Translation: AAC78284.1.
RefSeqiNP_001289642.1. NM_001302713.1.

Genome annotation databases

GeneIDi104426035.
KEGGiegr:104426035.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AF029977 mRNA. Translation: AAC78284.1.
RefSeqiNP_001289642.1. NM_001302713.1.

3D structure databases

ProteinModelPortaliO64935.
ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

GeneIDi104426035.
KEGGiegr:104426035.

Family and domain databases

InterProiIPR002487. TF_Kbox.
IPR002100. TF_MADSbox.
[Graphical view]
PfamiPF01486. K-box. 1 hit.
PF00319. SRF-TF. 1 hit.
[Graphical view]
PRINTSiPR00404. MADSDOMAIN.
SMARTiSM00432. MADS. 1 hit.
[Graphical view]
SUPFAMiSSF55455. SSF55455. 1 hit.
PROSITEiPS51297. K_BOX. 1 hit.
PS00350. MADS_BOX_1. 1 hit.
PS50066. MADS_BOX_2. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. "Eucalypt MADS-box genes expressed in developing flowers."
    Southerton S.G., Marshall H., Mouradov A., Teasdale R.D.
    Plant Physiol. 118:365-372(1998) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE.
    Tissue: Young flowersImported.

Entry informationi

Entry nameiO64935_EUCGR
AccessioniPrimary (citable) accession number: O64935
Entry historyi
Integrated into UniProtKB/TrEMBL: August 1, 1998
Last sequence update: August 1, 1998
Last modified: May 11, 2016
This is version 71 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.