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O64890 (GUN13_ARATH) Reviewed, UniProtKB/Swiss-Prot

Last modified February 19, 2014. Version 89. Feed History...

Clusters with 100%, 90%, 50% identity | Documents (3) | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info·DocumentsCustomize order

Names and origin

Protein namesRecommended name:
Endoglucanase 13

EC=3.2.1.4
Alternative name(s):
Endo-1,4-beta glucanase 13
Gene names
Ordered Locus Names:At2g44550
ORF Names:F4I1.55
OrganismArabidopsis thaliana (Mouse-ear cress) [Reference proteome]
Taxonomic identifier3702 [NCBI]
Taxonomic lineageEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaeudicotyledonsGunneridaePentapetalaerosidsmalvidsBrassicalesBrassicaceaeCamelineaeArabidopsis

Protein attributes

Sequence length490 AA.
Sequence statusComplete.
Sequence processingThe displayed sequence is further processed into a mature form.
Protein existenceEvidence at transcript level

General annotation (Comments)

Catalytic activity

Endohydrolysis of (1->4)-beta-D-glucosidic linkages in cellulose, lichenin and cereal beta-D-glucans.

Subcellular location

Secreted By similarity.

Sequence similarities

Belongs to the glycosyl hydrolase 9 (cellulase E) family.

Ontologies

Keywords
   Biological processCarbohydrate metabolism
Cell wall biogenesis/degradation
Cellulose degradation
Polysaccharide degradation
   Cellular componentSecreted
   DomainSignal
   Molecular functionGlycosidase
Hydrolase
   PTMGlycoprotein
   Technical termComplete proteome
Reference proteome
Gene Ontology (GO)
   Biological_processcellulose catabolic process

Inferred from electronic annotation. Source: UniProtKB-KW

   Cellular_componentextracellular region

Inferred from electronic annotation. Source: UniProtKB-SubCell

   Molecular_functioncellulase activity

Inferred from electronic annotation. Source: UniProtKB-EC

Complete GO annotation...

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Signal peptide1 – 2626 Potential
Chain27 – 490464Endoglucanase 13
PRO_0000249265

Sites

Active site4121 By similarity
Active site4641 By similarity
Active site4731 By similarity

Amino acid modifications

Glycosylation61N-linked (GlcNAc...) Potential

Sequences

Sequence LengthMass (Da)Tools
O64890 [UniParc].

Last modified August 1, 1998. Version 1.
Checksum: 70A6A9155FAFFC08

FASTA49053,448
        10         20         30         40         50         60 
MSQLKNGSSQ CLWTSICIVL IVMSMAREAV STNYAEALKN SLLYFEAQRS GKLPPNQRVT 

        70         80         90        100        110        120 
WRGDSALRDG SDAHIDLTGG YYDAGDNMKF GFPLAFTTTM LAWSNIEMAS QLRAHHEKGN 

       130        140        150        160        170        180 
ALRALKWATD YLIKAHPQPN VLYGQVGEGN SDHKCWMRPE DMTTPRTSYR IDAQHPGSDL 

       190        200        210        220        230        240 
AGETAAAMAA ASIAFAPSDK AYANILIGHA KDLFAFAKAH RGLYQNSIPN AGGFYASSGY 

       250        260        270        280        290        300 
EDELLWAAAW LHRATNDQIY LDYLTEAETG GPRTVFAWDD KFVGAQVLVA KLALEGKVES 

       310        320        330        340        350        360 
SEQIVEYKSM AEQFICNCAQ KGDNNVKKTP GGLLYFLPWN NLQYTTAATF VLSAYSKYLE 

       370        380        390        400        410        420 
AAKASIDCPD GALQASDLLQ VARSQVDYIL GSNPQKMSYM VGVGTNYPKK PHHRAASIVS 

       430        440        450        460        470        480 
IRQDKTPVTC SGGYDKWYNN PAPNPNVLAG AVVGGPDDND VYGDERSNFQ QAEPATVTTA 

       490 
PLVGVLALVF 

« Hide

References

« Hide 'large scale' references
[1]"Sequence and analysis of chromosome 2 of the plant Arabidopsis thaliana."
Lin X., Kaul S., Rounsley S.D., Shea T.P., Benito M.-I., Town C.D., Fujii C.Y., Mason T.M., Bowman C.L., Barnstead M.E., Feldblyum T.V., Buell C.R., Ketchum K.A., Lee J.J., Ronning C.M., Koo H.L., Moffat K.S., Cronin L.A. expand/collapse author list , Shen M., Pai G., Van Aken S., Umayam L., Tallon L.J., Gill J.E., Adams M.D., Carrera A.J., Creasy T.H., Goodman H.M., Somerville C.R., Copenhaver G.P., Preuss D., Nierman W.C., White O., Eisen J.A., Salzberg S.L., Fraser C.M., Venter J.C.
Nature 402:761-768(1999) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: cv. Columbia.
[2]The Arabidopsis Information Resource (TAIR)
Submitted (APR-2011) to the EMBL/GenBank/DDBJ databases
Cited for: GENOME REANNOTATION.
Strain: cv. Columbia.
[3]"Phylogenetic analysis of the plant endo-beta-1,4-glucanase gene family."
Libertini E., Li Y., McQueen-Mason S.J.
J. Mol. Evol. 58:506-515(2004) [PubMed] [Europe PMC] [Abstract]
Cited for: GENE FAMILY.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
AC003672 Genomic DNA. Translation: AAC27457.1.
AC004521 Genomic DNA. Translation: AAM14964.1.
CP002685 Genomic DNA. Translation: AEC10437.1.
PIRT02411.
RefSeqNP_181983.1. NM_130019.1.
UniGeneAt.53122.

3D structure databases

ProteinModelPortalO64890.
SMRO64890. Positions 30-487.
ModBaseSearch...
MobiDBSearch...

Protein family/group databases

CAZyGH9. Glycoside Hydrolase Family 9.

Proteomic databases

PaxDbO64890.
PRIDEO64890.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblPlantsAT2G44550.1; AT2G44550.1; AT2G44550.
GeneID819063.
KEGGath:AT2G44550.

Organism-specific databases

TAIRAT2G44550.

Phylogenomic databases

eggNOGNOG05134.
HOGENOMHOG000021033.
InParanoidO64890.
OMAVMSMARE.
PhylomeDBO64890.
ProtClustDBPLN00119.

Enzyme and pathway databases

BioCycARA:AT2G44550-MONOMER.

Gene expression databases

GenevestigatorO64890.

Family and domain databases

Gene3D1.50.10.10. 1 hit.
InterProIPR008928. 6-hairpin_glycosidase-like.
IPR012341. 6hp_glycosidase.
IPR001701. Glyco_hydro_9.
IPR018221. Glyco_hydro_9_AS.
[Graphical view]
PfamPF00759. Glyco_hydro_9. 1 hit.
[Graphical view]
SUPFAMSSF48208. SSF48208. 1 hit.
PROSITEPS00592. GLYCOSYL_HYDROL_F9_1. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameGUN13_ARATH
AccessionPrimary (citable) accession number: O64890
Entry history
Integrated into UniProtKB/Swiss-Prot: September 5, 2006
Last sequence update: August 1, 1998
Last modified: February 19, 2014
This is version 89 of the entry and version 1 of the sequence. [Complete history]
Entry statusReviewed (UniProtKB/Swiss-Prot)
Annotation programPlant Protein Annotation Program

Relevant documents

SIMILARITY comments

Index of protein domains and families

Glycosyl hydrolases

Classification of glycosyl hydrolase families and list of entries

Arabidopsis thaliana

Arabidopsis thaliana: entries and gene names