Skip Header

You are using a version of browser that may not display all the features of this website. Please consider upgrading your browser.
Protein

Syntaxin-124

Gene

SYP124

Organism
Arabidopsis thaliana (Mouse-ear cress)
Status
Reviewed-Annotation score: Annotation score: 4 out of 5-Experimental evidence at transcript leveli

Functioni

Vesicle trafficking protein that functions in the secretory pathway.By similarity

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Biological processi

Protein transport, Transport

Enzyme and pathway databases

ReactomeiR-ATH-449147. Signaling by Interleukins.

Names & Taxonomyi

Protein namesi
Recommended name:
Syntaxin-124
Short name:
AtSYP124
Gene namesi
Name:SYP124
Ordered Locus Names:At1g61290
ORF Names:T1F9.22
OrganismiArabidopsis thaliana (Mouse-ear cress)
Taxonomic identifieri3702 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaeudicotyledonsGunneridaePentapetalaerosidsmalvidsBrassicalesBrassicaceaeCamelineaeArabidopsis
Proteomesi
  • UP000006548 Componenti: Chromosome 1

Organism-specific databases

TAIRiAT1G61290.

Subcellular locationi

Topology

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Topological domaini1 – 279279CytoplasmicSequence analysisAdd
BLAST
Transmembranei280 – 30021Helical; Anchor for type IV membrane proteinSequence analysisAdd
BLAST
Topological domaini301 – 3033VesicularSequence analysis

GO - Cellular componenti

  • integral component of membrane Source: GO_Central
  • plasma membrane Source: TAIR
  • SNARE complex Source: GO_Central
  • transport vesicle Source: TAIR
Complete GO annotation...

Keywords - Cellular componenti

Membrane

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 303303Syntaxin-124PRO_0000210249Add
BLAST

Amino acid modifications

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Modified residuei1 – 11N-acetylmethionineBy similarity

Keywords - PTMi

Acetylation

Proteomic databases

PaxDbiO64791.
PRIDEiO64791.

Expressioni

Gene expression databases

GenevisibleiO64791. AT.

Interactioni

Subunit structurei

Part of the t-SNARE complex.By similarity

GO - Molecular functioni

Protein-protein interaction databases

STRINGi3702.AT1G61290.1.

Structurei

3D structure databases

ProteinModelPortaliO64791.
SMRiO64791. Positions 33-286.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Domaini203 – 26563t-SNARE coiled-coil homologyPROSITE-ProRule annotationAdd
BLAST

Coiled coil

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Coiled coili31 – 11282Sequence analysisAdd
BLAST

Sequence similaritiesi

Belongs to the syntaxin family.Curated
Contains 1 t-SNARE coiled-coil homology domain.PROSITE-ProRule annotation

Keywords - Domaini

Coiled coil, Transmembrane, Transmembrane helix

Phylogenomic databases

eggNOGiKOG0810. Eukaryota.
COG5074. LUCA.
InParanoidiO64791.
KOiK08486.
OMAiCYAILLF.
OrthoDBiEOG09360O8W.
PhylomeDBiO64791.

Family and domain databases

InterProiIPR006012. Syntaxin/epimorphin_CS.
IPR006011. Syntaxin_N.
IPR010989. t-SNARE.
IPR000727. T_SNARE_dom.
[Graphical view]
PfamiPF05739. SNARE. 1 hit.
PF00804. Syntaxin. 1 hit.
[Graphical view]
SMARTiSM00503. SynN. 1 hit.
SM00397. t_SNARE. 1 hit.
[Graphical view]
SUPFAMiSSF47661. SSF47661. 1 hit.
PROSITEiPS00914. SYNTAXIN. 1 hit.
PS50192. T_SNARE. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

O64791-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MNDLFSSSFK KYTDLKQQAQ MDDIESGKET MNLDKFFEDV ENVKDNMKGV
60 70 80 90 100
ETLYKSLQDS NEECKTVHNA KKVKELRAKM DGDVAQVLKR VKMIKQKLEA
110 120 130 140 150
LEKANANSRN VSGCGPGSST DRTRTSVVSG LGKKLKDLMD SFQGLRARMN
160 170 180 190 200
AEYKETVERR YFTITGEQAD EQTIENLISS GESENFLQKA IQEQGRGQIL
210 220 230 240 250
DTISEIQERH DAVKEIEKNL IELHQVFLDM AALVESQGQQ LNDIESHVSK
260 270 280 290 300
ASSFVRRGTD QLQDAREYQK SSRKWTCYAI LLFIVVFALL LIPALPHIML

MLK
Length:303
Mass (Da):34,468
Last modified:August 1, 1998 - v1
Checksum:iB02A2592CA145210
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AC004255 Genomic DNA. Translation: AAC13912.1.
CP002684 Genomic DNA. Translation: AEE33817.1.
DQ446382 mRNA. Translation: ABE65730.1.
PIRiG96638.
RefSeqiNP_176324.1. NM_104810.2.
UniGeneiAt.50658.

Genome annotation databases

EnsemblPlantsiAT1G61290.1; AT1G61290.1; AT1G61290.
GeneIDi842423.
GrameneiAT1G61290.1; AT1G61290.1; AT1G61290.
KEGGiath:AT1G61290.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AC004255 Genomic DNA. Translation: AAC13912.1.
CP002684 Genomic DNA. Translation: AEE33817.1.
DQ446382 mRNA. Translation: ABE65730.1.
PIRiG96638.
RefSeqiNP_176324.1. NM_104810.2.
UniGeneiAt.50658.

3D structure databases

ProteinModelPortaliO64791.
SMRiO64791. Positions 33-286.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi3702.AT1G61290.1.

Proteomic databases

PaxDbiO64791.
PRIDEiO64791.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblPlantsiAT1G61290.1; AT1G61290.1; AT1G61290.
GeneIDi842423.
GrameneiAT1G61290.1; AT1G61290.1; AT1G61290.
KEGGiath:AT1G61290.

Organism-specific databases

TAIRiAT1G61290.

Phylogenomic databases

eggNOGiKOG0810. Eukaryota.
COG5074. LUCA.
InParanoidiO64791.
KOiK08486.
OMAiCYAILLF.
OrthoDBiEOG09360O8W.
PhylomeDBiO64791.

Enzyme and pathway databases

ReactomeiR-ATH-449147. Signaling by Interleukins.

Miscellaneous databases

PROiO64791.

Gene expression databases

GenevisibleiO64791. AT.

Family and domain databases

InterProiIPR006012. Syntaxin/epimorphin_CS.
IPR006011. Syntaxin_N.
IPR010989. t-SNARE.
IPR000727. T_SNARE_dom.
[Graphical view]
PfamiPF05739. SNARE. 1 hit.
PF00804. Syntaxin. 1 hit.
[Graphical view]
SMARTiSM00503. SynN. 1 hit.
SM00397. t_SNARE. 1 hit.
[Graphical view]
SUPFAMiSSF47661. SSF47661. 1 hit.
PROSITEiPS00914. SYNTAXIN. 1 hit.
PS50192. T_SNARE. 1 hit.
[Graphical view]
ProtoNetiSearch...

Entry informationi

Entry nameiSY124_ARATH
AccessioniPrimary (citable) accession number: O64791
Secondary accession number(s): Q1PFI1
Entry historyi
Integrated into UniProtKB/Swiss-Prot: February 12, 2003
Last sequence update: August 1, 1998
Last modified: September 7, 2016
This is version 112 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programPlant Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Arabidopsis thaliana
    Arabidopsis thaliana: entries and gene names
  2. SIMILARITY comments
    Index of protein domains and families

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.