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Protein

Probable disease resistance protein At1g61300

Gene

At1g61300

Organism
Arabidopsis thaliana (Mouse-ear cress)
Status
Reviewed-Annotation score: Annotation score: 3 out of 5-Experimental evidence at transcript leveli

Functioni

Probable disease resistance protein.By similarity

Regions

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Nucleotide bindingi68 – 758ATPSequence analysis

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Biological processi

Plant defense

Keywords - Ligandi

ATP-binding, Nucleotide-binding

Names & Taxonomyi

Protein namesi
Recommended name:
Probable disease resistance protein At1g61300
Gene namesi
Ordered Locus Names:At1g61300
ORF Names:T1F9.21
OrganismiArabidopsis thaliana (Mouse-ear cress)
Taxonomic identifieri3702 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaeudicotyledonsGunneridaePentapetalaerosidsmalvidsBrassicalesBrassicaceaeCamelineaeArabidopsis
Proteomesi
  • UP000006548 Componenti: Chromosome 1

Organism-specific databases

TAIRiAT1G61300.

Subcellular locationi

GO - Cellular componenti

  • cytosol Source: TAIR
  • plasma membrane Source: UniProtKB-SubCell
Complete GO annotation...

Keywords - Cellular componenti

Cell membrane, Membrane

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Initiator methionineiRemovedSequence analysis
Chaini2 – 762761Probable disease resistance protein At1g61300PRO_0000212749Add
BLAST

Amino acid modifications

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Lipidationi2 – 21N-myristoyl glycineSequence analysis
Lipidationi3 – 31S-palmitoyl cysteineSequence analysis
Lipidationi4 – 41S-palmitoyl cysteineSequence analysis

Keywords - PTMi

Lipoprotein, Myristate, Palmitate

Proteomic databases

PaxDbiO64790.
PRIDEiO64790.

Expressioni

Gene expression databases

GenevisibleiO64790. AT.

Interactioni

Protein-protein interaction databases

STRINGi3702.AT1G61300.1.

Structurei

3D structure databases

ProteinModelPortaliO64790.
SMRiO64790. Positions 33-244, 402-697.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Domaini26 – 329304NB-ARCAdd
BLAST
Repeati401 – 42222LRR 1Add
BLAST
Repeati423 – 44422LRR 2Add
BLAST
Repeati447 – 47024LRR 3Add
BLAST
Repeati471 – 49323LRR 4Add
BLAST
Repeati494 – 51623LRR 5Add
BLAST

Domaini

The LRR repeats probably act as specificity determinant of pathogen recognition.By similarity

Sequence similaritiesi

Belongs to the disease resistance NB-LRR family.Curated
Contains 5 LRR (leucine-rich) repeats.Curated
Contains 1 NB-ARC domain.Curated

Keywords - Domaini

Leucine-rich repeat, Repeat

Phylogenomic databases

eggNOGiKOG4658. Eukaryota.
COG4886. LUCA.
HOGENOMiHOG000238348.
InParanoidiO64790.
OMAiCRESETA.
PhylomeDBiO64790.

Family and domain databases

Gene3Di3.40.50.300. 1 hit.
3.80.10.10. 1 hit.
InterProiIPR032675. L_dom-like.
IPR001611. Leu-rich_rpt.
IPR002182. NB-ARC.
IPR027417. P-loop_NTPase.
[Graphical view]
PfamiPF13855. LRR_8. 1 hit.
PF00931. NB-ARC. 1 hit.
[Graphical view]
SUPFAMiSSF52058. SSF52058. 1 hit.
SSF52540. SSF52540. 1 hit.

Sequencei

Sequence statusi: Complete.

Sequence processingi: The displayed sequence is further processed into a mature form.

O64790-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MGCCFSVQFS FDDQTLVRIF NFLCGNINRN SFGVEERPTQ PTIGQEEMLE
60 70 80 90 100
KAWNRLMEDR VGIMGLHGMG GVGKTTLFKK IHNKFAKMSS RFDIVIWIVV
110 120 130 140 150
SKGAKLSKLQ EDIAEKLHLC DDLWKNKNES DKATDIHRVL KGKRFVLMLD
160 170 180 190 200
DIWEKVDLEA IGVPYPSEVN KCKVAFTTRD QKVCGEMGDH KPMQVKCLEP
210 220 230 240 250
EDAWELFKNK VGDNTLRSDP VIVELAREVA QKCRGLPLAL SVIGETMASK
260 270 280 290 300
TMVQEWEHAI DVLTRSAAEF SNMGNKILPI LKYSYDSLGD EHIKSCFLYC
310 320 330 340 350
ALFPEDDEIY NEKLIDYWIC EGFIGEDQVI KRARNKGYEM LGTLTLANLL
360 370 380 390 400
TKVGTEHVVM HDVVREMALW IASDFGKQKE NFVVRARVGL HERPEAKDWG
410 420 430 440 450
AVRRMSLMDN HIEEITCESK CSELTTLFLQ SNQLKNLSGE FIRYMQKLVV
460 470 480 490 500
LDLSYNRDFN KLPEQISGLV SLQFLDLSNT SIKQLPVGLK KLKKLTFLNL
510 520 530 540 550
AYTVRLCSIS GISRLLSLRL LRLLGSKVHG DASVLKELQK LQNLQHLAIT
560 570 580 590 600
LSAELSLNQR LANLISILGI EGFLQKPFDL SFLASMENLS SLWVKNSYFS
610 620 630 640 650
EIKCRESETA SSYLRINPKI PCFTNLSRLG LSKCHSIKDL TWILFAPNLV
660 670 680 690 700
YLYIEDSREV GEIINKEKAT NLTSITPFLK LERLILYNLP KLESIYWSPL
710 720 730 740 750
HFPRLLIIHV LDCPKLRKLP LNATSVPLVE EFQIRMYPPG LGNELEWEDE
760
DTKNRFVLSI KK
Length:762
Mass (Da):87,132
Last modified:October 14, 2008 - v2
Checksum:i601993112A3BFF91
GO

Sequence cautioni

The sequence AAC13911 differs from that shown. Reason: Erroneous gene model prediction. Curated
The sequence AAM20459 differs from that shown. Reason: Erroneous translation. Wrong choice of frame.Curated
The sequence AAM91258 differs from that shown. Reason: Erroneous translation. Wrong choice of frame.Curated

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AC004255 Genomic DNA. Translation: AAC13911.1. Sequence problems.
CP002684 Genomic DNA. Translation: AEE33818.1.
AK226587 mRNA. No translation available.
AY099608 mRNA. Translation: AAM20459.1. Sequence problems.
AY128858 mRNA. Translation: AAM91258.1. Sequence problems.
RefSeqiNP_176325.2. NM_104811.3.
UniGeneiAt.36488.
At.74126.

Genome annotation databases

EnsemblPlantsiAT1G61300.1; AT1G61300.1; AT1G61300.
GeneIDi842424.
GrameneiAT1G61300.1; AT1G61300.1; AT1G61300.
KEGGiath:AT1G61300.

Cross-referencesi

Web resourcesi

NIB-LRRS

Functional and comparative genomics of disease resistance gene homologs

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AC004255 Genomic DNA. Translation: AAC13911.1. Sequence problems.
CP002684 Genomic DNA. Translation: AEE33818.1.
AK226587 mRNA. No translation available.
AY099608 mRNA. Translation: AAM20459.1. Sequence problems.
AY128858 mRNA. Translation: AAM91258.1. Sequence problems.
RefSeqiNP_176325.2. NM_104811.3.
UniGeneiAt.36488.
At.74126.

3D structure databases

ProteinModelPortaliO64790.
SMRiO64790. Positions 33-244, 402-697.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi3702.AT1G61300.1.

Proteomic databases

PaxDbiO64790.
PRIDEiO64790.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblPlantsiAT1G61300.1; AT1G61300.1; AT1G61300.
GeneIDi842424.
GrameneiAT1G61300.1; AT1G61300.1; AT1G61300.
KEGGiath:AT1G61300.

Organism-specific databases

TAIRiAT1G61300.

Phylogenomic databases

eggNOGiKOG4658. Eukaryota.
COG4886. LUCA.
HOGENOMiHOG000238348.
InParanoidiO64790.
OMAiCRESETA.
PhylomeDBiO64790.

Miscellaneous databases

PROiO64790.

Gene expression databases

GenevisibleiO64790. AT.

Family and domain databases

Gene3Di3.40.50.300. 1 hit.
3.80.10.10. 1 hit.
InterProiIPR032675. L_dom-like.
IPR001611. Leu-rich_rpt.
IPR002182. NB-ARC.
IPR027417. P-loop_NTPase.
[Graphical view]
PfamiPF13855. LRR_8. 1 hit.
PF00931. NB-ARC. 1 hit.
[Graphical view]
SUPFAMiSSF52058. SSF52058. 1 hit.
SSF52540. SSF52540. 1 hit.
ProtoNetiSearch...

Entry informationi

Entry nameiDRL17_ARATH
AccessioniPrimary (citable) accession number: O64790
Secondary accession number(s): Q8L4D2
Entry historyi
Integrated into UniProtKB/Swiss-Prot: April 13, 2004
Last sequence update: October 14, 2008
Last modified: February 17, 2016
This is version 105 of the entry and version 2 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programPlant Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Arabidopsis thaliana
    Arabidopsis thaliana: entries and gene names
  2. SIMILARITY comments
    Index of protein domains and families

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.