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Protein

G-type lectin S-receptor-like serine/threonine-protein kinase SD1-29

Gene

SD129

Organism
Arabidopsis thaliana (Mouse-ear cress)
Status
Reviewed-Annotation score: Annotation score: 5 out of 5-Experimental evidence at protein leveli

Functioni

Catalytic activityi

ATP + a protein = ADP + a phosphoprotein.

Sites

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Binding sitei516ATPPROSITE-ProRule annotation1
Active sitei613Proton acceptorPROSITE-ProRule annotation1

Regions

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Nucleotide bindingi494 – 502ATPPROSITE-ProRule annotation9

GO - Molecular functioni

  • ATP binding Source: UniProtKB-KW
  • calmodulin binding Source: UniProtKB
  • carbohydrate binding Source: UniProtKB-KW
  • protein kinase activity Source: TAIR
  • protein serine/threonine kinase activity Source: UniProtKB
  • ubiquitin protein ligase binding Source: UniProtKB

GO - Biological processi

  • detection of lipopolysaccharide Source: TAIR
  • innate immune response Source: TAIR
  • pathogen-associated molecular pattern dependent induction by symbiont of host innate immune response Source: TAIR
  • protein autophosphorylation Source: TAIR
  • recognition of pollen Source: InterPro

Keywordsi

Molecular functionKinase, Receptor, Serine/threonine-protein kinase, Transferase
LigandATP-binding, Lectin, Nucleotide-binding

Names & Taxonomyi

Protein namesi
Recommended name:
G-type lectin S-receptor-like serine/threonine-protein kinase SD1-29 (EC:2.7.11.1)
Alternative name(s):
S-domain-1 (SD1) receptor kinase 29
Short name:
SD1-29
Gene namesi
Name:SD129
Ordered Locus Names:At1g61380
ORF Names:T1F9.13
OrganismiArabidopsis thaliana (Mouse-ear cress)
Taxonomic identifieri3702 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaeudicotyledonsGunneridaePentapetalaerosidsmalvidsBrassicalesBrassicaceaeCamelineaeArabidopsis
Proteomesi
  • UP000006548 Componenti: Chromosome 1

Organism-specific databases

AraportiAT1G61380.
TAIRilocus:2197729. AT1G61380.

Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cell wall Cytoskeleton Vacuole Chloroplast Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertion Graphics by Christian Stolte; Source: COMPARTMENTS

Topology

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Topological domaini22 – 428ExtracellularSequence analysisAdd BLAST407
Transmembranei429 – 449HelicalSequence analysisAdd BLAST21
Topological domaini450 – 805CytoplasmicSequence analysisAdd BLAST356

Keywords - Cellular componenti

Cell membrane, Membrane

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Signal peptidei1 – 21Sequence analysisAdd BLAST21
ChainiPRO_000040130222 – 805G-type lectin S-receptor-like serine/threonine-protein kinase SD1-29Add BLAST784

Amino acid modifications

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Glycosylationi24N-linked (GlcNAc...) asparagineSequence analysis1
Glycosylationi50N-linked (GlcNAc...) asparagineSequence analysis1
Glycosylationi85N-linked (GlcNAc...) asparagineSequence analysis1
Glycosylationi91N-linked (GlcNAc...) asparagineSequence analysis1
Glycosylationi248N-linked (GlcNAc...) asparagineSequence analysis1
Disulfide bondi281 ↔ 293By similarity
Disulfide bondi287 ↔ 301By similarity
Glycosylationi319N-linked (GlcNAc...) asparagineSequence analysis1
Disulfide bondi371 ↔ 392By similarity
Disulfide bondi375 ↔ 381By similarity
Glycosylationi378N-linked (GlcNAc...) asparagineSequence analysis1
Modified residuei617PhosphoserineBy similarity1
Modified residuei630PhosphoserineBy similarity1
Modified residuei647PhosphothreonineBy similarity1

Keywords - PTMi

Disulfide bond, Glycoprotein, Phosphoprotein

Proteomic databases

PaxDbiO64782.

Expressioni

Gene expression databases

ExpressionAtlasiO64782. baseline and differential.
GenevisibleiO64782. AT.

Interactioni

Subunit structurei

Interacts with PUB9, PUB13, PUB14, PUB29, PUB38, PUB44 and PUB45.1 Publication

GO - Molecular functioni

  • calmodulin binding Source: UniProtKB
  • ubiquitin protein ligase binding Source: UniProtKB

Protein-protein interaction databases

STRINGi3702.AT1G61380.1.

Structurei

3D structure databases

ProteinModelPortaliO64782.
SMRiO64782.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini22 – 141Bulb-type lectinPROSITE-ProRule annotationAdd BLAST120
Domaini277 – 313EGF-likeAdd BLAST37
Domaini332 – 418PANPROSITE-ProRule annotationAdd BLAST87
Domaini488 – 773Protein kinasePROSITE-ProRule annotationAdd BLAST286

Region

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Regioni577 – 594CaM-bindingBy similarityAdd BLAST18

Sequence similaritiesi

Belongs to the protein kinase superfamily. Ser/Thr protein kinase family.PROSITE-ProRule annotation

Keywords - Domaini

EGF-like domain, Signal, Transmembrane, Transmembrane helix

Phylogenomic databases

eggNOGiENOG410IH0T. Eukaryota.
COG0515. LUCA.
HOGENOMiHOG000116559.
InParanoidiO64782.
OMAiRISRFIY.
OrthoDBiEOG093602BY.
PhylomeDBiO64782.

Family and domain databases

Gene3Di2.90.10.10. 1 hit.
InterProiView protein in InterPro
IPR001480. Bulb-type_lectin_dom.
IPR011009. Kinase-like_dom.
IPR003609. Pan_app.
IPR000719. Prot_kinase_dom.
IPR021820. S-locus_recpt_kinase_C.
IPR000858. S_locus_glycoprot_dom.
IPR001245. Ser-Thr/Tyr_kinase_cat_dom.
IPR008271. Ser/Thr_kinase_AS.
IPR024171. SRK-like_kinase.
PfamiView protein in Pfam
PF01453. B_lectin. 1 hit.
PF11883. DUF3403. 1 hit.
PF08276. PAN_2. 1 hit.
PF07714. Pkinase_Tyr. 1 hit.
PF00954. S_locus_glycop. 1 hit.
PIRSFiPIRSF000641. SRK. 1 hit.
SMARTiView protein in SMART
SM00108. B_lectin. 1 hit.
SM00473. PAN_AP. 1 hit.
SM00220. S_TKc. 1 hit.
SUPFAMiSSF51110. SSF51110. 2 hits.
SSF56112. SSF56112. 1 hit.
PROSITEiView protein in PROSITE
PS50927. BULB_LECTIN. 1 hit.
PS50948. PAN. 1 hit.
PS50011. PROTEIN_KINASE_DOM. 1 hit.
PS00108. PROTEIN_KINASE_ST. 1 hit.

Sequencei

Sequence statusi: Complete.

Sequence processingi: The displayed sequence is further processed into a mature form.

O64782-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MGMVLFACLL LLIIFPTCGY AAINTSSPLS IRQTLSSPGG FYELGFFSPN
60 70 80 90 100
NTQNQYVGIW FKKIVPRVVV WVANRDTPVT SSAANLTISS NGSLILLDGK
110 120 130 140 150
QDVIWSTGKA FTSNKCHAEL LDTGNFVVID DVSGNKLWQS FEHLGNTMLP
160 170 180 190 200
QSSLMYDTSN GKKRVLTTWK SNSDPSPGEF SLEITPQIPT QGLIRRGSVP
210 220 230 240 250
YWRCGPWAKT RFSGISGIDA SYVSPFSVVQ DTAAGTGSFS YSTLRNYNLS
260 270 280 290 300
YVTLTPEGKM KILWDDGNNW KLHLSLPENP CDLYGRCGPY GLCVRSDPPK
310 320 330 340 350
CECLKGFVPK SDEEWGKGNW TSGCVRRTKL SCQAKSSMKT QGKDTDIFYR
360 370 380 390 400
MTDVKTPDLH QFASFLNAEQ CYQGCLGNCS CTAFAYISGI GCLVWNGELA
410 420 430 440 450
DTVQFLSSGE FLFIRLASSE LAGSSRRKII VGTTVSLSIF LILVFAAIML
460 470 480 490 500
WRYRAKQNDA WKNGFERQDV SGVNFFEMHT IRTATNNFSP SNKLGQGGFG
510 520 530 540 550
PVYKGKLVDG KEIGVKRLAS SSGQGTEEFM NEITLISKLQ HRNLVRLLGY
560 570 580 590 600
CIDGEEKLLI YEFMVNKSLD IFIFDPCLKF ELDWPKRFNI IQGIARGLLY
610 620 630 640 650
LHRDSRLRVI HRDLKVSNIL LDDRMNPKIS DFGLARMFQG TQYQDNTRRV
660 670 680 690 700
VGTLGYMSPE YAWAGLFSEK SDIYSFGVLM LEIISGKRIS RFIYGDESKG
710 720 730 740 750
LLAYTWDSWC ETGGSNLLDR DLTDTCQAFE VARCVQIGLL CVQHEAVDRP
760 770 780 790 800
NTLQVLSMLT SATDLPVPKQ PIFAVHTLND MPMLQANSQD FLSVNEMTES

MIQGR
Length:805
Mass (Da):89,897
Last modified:August 1, 1998 - v1
Checksum:i52CDD70D3B575B78
GO

Experimental Info

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Sequence conflicti53Q → R in AAM61715 (Ref. 4) Curated1
Sequence conflicti101Q → E in AAM61715 (Ref. 4) Curated1
Sequence conflicti112T → S in AAM61715 (Ref. 4) Curated1
Sequence conflicti119E → Q in AAM61715 (Ref. 4) Curated1
Sequence conflicti259K → Q in AAM61715 (Ref. 4) Curated1
Sequence conflicti269N → D in AAM61715 (Ref. 4) Curated1
Sequence conflicti411F → I in AAM61715 (Ref. 4) Curated1
Sequence conflicti613D → N in AAM61715 (Ref. 4) Curated1

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AC004255 Genomic DNA. Translation: AAC13903.1.
CP002684 Genomic DNA. Translation: AEE33829.1.
AY090241 mRNA. Translation: AAL90905.1.
BT000638 mRNA. Translation: AAN18204.1.
AY085162 mRNA. Translation: AAM61715.1.
RefSeqiNP_564775.1. NM_104819.2.
UniGeneiAt.36467.

Genome annotation databases

EnsemblPlantsiAT1G61380.1; AT1G61380.1; AT1G61380.
GeneIDi842432.
GrameneiAT1G61380.1; AT1G61380.1; AT1G61380.
KEGGiath:AT1G61380.

Similar proteinsi

Entry informationi

Entry nameiSD129_ARATH
AccessioniPrimary (citable) accession number: O64782
Secondary accession number(s): Q8LEY0
Entry historyiIntegrated into UniProtKB/Swiss-Prot: November 30, 2010
Last sequence update: August 1, 1998
Last modified: June 7, 2017
This is version 130 of the entry and version 1 of the sequence. See complete history.
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programPlant Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Arabidopsis thaliana
    Arabidopsis thaliana: entries and gene names
  2. SIMILARITY comments
    Index of protein domains and families