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Protein

Agamous-like MADS-box protein AGL29

Gene

AGL29

Organism
Arabidopsis thaliana (Mouse-ear cress)
Status
Reviewed-Annotation score: -Experimental evidence at transcript leveli

Functioni

Probable transcription factor.

GO - Molecular functioni

  • DNA binding Source: UniProtKB-KW
  • DNA binding transcription factor activity Source: TAIR
  • protein dimerization activity Source: InterPro

GO - Biological processi

Keywordsi

Molecular functionDNA-binding
Biological processTranscription, Transcription regulation

Names & Taxonomyi

Protein namesi
Recommended name:
Agamous-like MADS-box protein AGL29Curated
Gene namesi
Name:AGL291 Publication
Ordered Locus Names:At2g34440Imported
OrganismiArabidopsis thaliana (Mouse-ear cress)
Taxonomic identifieri3702 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaeudicotyledonsGunneridaePentapetalaerosidsmalvidsBrassicalesBrassicaceaeCamelineaeArabidopsis
Proteomesi
  • UP000006548 Componenti: Chromosome 2

Organism-specific databases

AraportiAT2G34440
TAIRilocus:2040819 AT2G34440

Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cell wall Cytoskeleton Vacuole Chloroplast Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertion Graphics by Christian Stolte; Source: COMPARTMENTS

Keywords - Cellular componenti

Nucleus

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_00004339651 – 172Agamous-like MADS-box protein AGL29Add BLAST172

Proteomic databases

PaxDbiO64703

Expressioni

Tissue specificityi

Expressed in pollen.1 Publication

Developmental stagei

During embryogenesis, expressed in the chalazal endosperm.1 Publication

Gene expression databases

ExpressionAtlasiO64703 baseline and differential
GenevisibleiO64703 AT

Interactioni

GO - Molecular functioni

Protein-protein interaction databases

IntActiO64703, 4 interactors
STRINGi3702.AT2G34440.1

Structurei

3D structure databases

ProteinModelPortaliO64703
SMRiO64703
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini1 – 61MADS-boxPROSITE-ProRule annotationAdd BLAST61

Coiled coil

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Coiled coili86 – 123Sequence analysisAdd BLAST38

Keywords - Domaini

Coiled coil

Phylogenomic databases

eggNOGiKOG0014 Eukaryota
COG5068 LUCA
InParanoidiO64703
OMAiCNAELGI
OrthoDBiEOG09360QRV
PhylomeDBiO64703

Family and domain databases

Gene3Di3.40.1810.10, 1 hit
InterProiView protein in InterPro
IPR002100 TF_MADSbox
IPR036879 TF_MADSbox_sf
PfamiView protein in Pfam
PF00319 SRF-TF, 1 hit
PRINTSiPR00404 MADSDOMAIN
SMARTiView protein in SMART
SM00432 MADS, 1 hit
SUPFAMiSSF55455 SSF55455, 1 hit
PROSITEiView protein in PROSITE
PS50066 MADS_BOX_2, 1 hit

Sequencei

Sequence statusi: Complete.

O64703-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MGRRKIKMEM VQDMNTRQVT FSKRRTGLFK KASELATLCN AELGIVVFSP
60 70 80 90 100
GGKPFSYGKP NLDSVAERFM REYDDSDSGD EEKSGNYRPK LKRLSERLDL
110 120 130 140 150
LNQEVEAEKE RGEKSQEKLE SAGDERFKES IETLTLDELN EYKDRLQTVH
160 170
GRIEGQVNHL QASSCLMLLS RK
Length:172
Mass (Da):19,753
Last modified:August 1, 1998 - v1
Checksum:i3244A1A986F5C5EF
GO

Sequence cautioni

The sequence ABK28522 differs from that shown. Reason: Erroneous termination at position 173. Translated as stop.Curated

Experimental Info

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Sequence conflicti42E → K in ABK28522 (PubMed:17147637).Curated1

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AC004077 Genomic DNA Translation: AAC26702.1
AC004481 Genomic DNA Translation: AAM14943.1
CP002685 Genomic DNA Translation: AEC08974.1
DQ446598 mRNA Translation: ABE65885.1
DQ653040 mRNA Translation: ABK28522.1 Sequence problems.
AB094117 mRNA Translation: BAC99092.1
PIRiT02331
RefSeqiNP_180991.1, NM_128996.3
UniGeneiAt.37804

Genome annotation databases

EnsemblPlantsiAT2G34440.1; AT2G34440.1; AT2G34440
GeneIDi818007
GrameneiAT2G34440.1; AT2G34440.1; AT2G34440
KEGGiath:AT2G34440

Similar proteinsi

Entry informationi

Entry nameiAGL29_ARATH
AccessioniPrimary (citable) accession number: O64703
Secondary accession number(s): A0MER8, Q76K79
Entry historyiIntegrated into UniProtKB/Swiss-Prot: October 14, 2015
Last sequence update: August 1, 1998
Last modified: April 25, 2018
This is version 128 of the entry and version 1 of the sequence. See complete history.
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programPlant Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome
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Main funding by: National Institutes of Health