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Protein

High mobility group B protein 14

Gene

HMGB14

Organism
Arabidopsis thaliana (Mouse-ear cress)
Status
Reviewed-Annotation score: -Experimental evidence at transcript leveli

Functioni

Regions

Feature keyPosition(s)DescriptionActionsGraphical viewLength
DNA bindingi63 – 132HMG boxPROSITE-ProRule annotationAdd BLAST70

GO - Molecular functioni

  • DNA binding Source: UniProtKB-KW
  • DNA binding transcription factor activity Source: TAIR

Keywordsi

Molecular functionDNA-binding

Names & Taxonomyi

Protein namesi
Recommended name:
High mobility group B protein 14
Alternative name(s):
Nucleosome/chromatin assembly factor group D 14
Gene namesi
Name:HMGB14
Synonyms:NFD14
Ordered Locus Names:At2g34450
ORF Names:F13P17.25
OrganismiArabidopsis thaliana (Mouse-ear cress)
Taxonomic identifieri3702 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaeudicotyledonsGunneridaePentapetalaerosidsmalvidsBrassicalesBrassicaceaeCamelineaeArabidopsis
Proteomesi
  • UP000006548 Componenti: Chromosome 2

Organism-specific databases

AraportiAT2G34450
TAIRilocus:2040834 AT2G34450

Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cell wall Cytoskeleton Vacuole Chloroplast Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertion Graphics by Christian Stolte; Source: COMPARTMENTS

Keywords - Cellular componenti

Nucleus

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_00003999391 – 151High mobility group B protein 14Add BLAST151

Amino acid modifications

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Modified residuei150PhosphoserineBy similarity1

Keywords - PTMi

Phosphoprotein

Proteomic databases

PaxDbiO64702
PRIDEiO64702

Expressioni

Gene expression databases

ExpressionAtlasiO64702 baseline and differential
GenevisibleiO64702 AT

Interactioni

Protein-protein interaction databases

IntActiO64702, 9 interactors
STRINGi3702.AT2G34450.2

Structurei

3D structure databases

ProteinModelPortaliO64702
SMRiO64702
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the HMGB family.Curated

Phylogenomic databases

eggNOGiKOG0381 Eukaryota
COG5648 LUCA
HOGENOMiHOG000197860
InParanoidiO64702
OMAiEKREEFH
PhylomeDBiO64702

Family and domain databases

Gene3Di1.10.30.10, 1 hit
InterProiView protein in InterPro
IPR009071 HMG_box_dom
IPR036910 HMG_box_dom_sf
PfamiView protein in Pfam
PF00505 HMG_box, 1 hit
SMARTiView protein in SMART
SM00398 HMG, 1 hit
SUPFAMiSSF47095 SSF47095, 1 hit
PROSITEiView protein in PROSITE
PS50118 HMG_BOX_2, 1 hit

Sequences (2)i

Sequence statusi: Complete.

This entry describes 2 isoformsi produced by alternative splicing. AlignAdd to basket

Isoform 1 (identifier: O64702-1) [UniParc]FASTAAdd to basket

This isoform has been chosen as the 'canonical' sequence. All positional information in this entry refers to it. This is also the sequence that appears in the downloadable versions of the entry.

« Hide

        10         20         30         40         50
MTKRAPKSGP LSPSCSGGSS RNLELAVKSS EGARRSTRLR LQPLRKPKTS
60 70 80 90 100
PKKKPVKLQT KMPKKPATAF FFFLDDFRKQ YQEENPDVKS MREIGKTCGE
110 120 130 140 150
KWKTMTYEEK VKYYDIATEK REEFHRAMTE YTKRMESGAH DESETDSDYS

E
Length:151
Mass (Da):17,499
Last modified:June 1, 2002 - v2
Checksum:i1BDCB99C1ED68327
GO
Isoform 2 (identifier: O64702-2) [UniParc]FASTAAdd to basket

The sequence of this isoform differs from the canonical sequence as follows:
     93-93: E → EV

Note: Derived from EST data. No experimental confirmation available.
Show »
Length:152
Mass (Da):17,598
Checksum:iA6C8D43EC12B9D45
GO

Alternative sequence

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Alternative sequenceiVSP_03994693E → EV in isoform 2. Curated1

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AC004077 Genomic DNA Translation: AAC26692.2
AC004481 Genomic DNA Translation: AAM14948.1
CP002685 Genomic DNA Translation: AEC08975.1
CP002685 Genomic DNA Translation: AEC08976.1
CP002685 Genomic DNA Translation: ANM62822.1
CP002685 Genomic DNA Translation: ANM62823.1
AK118955 mRNA Translation: BAC43535.1
BT005660 mRNA Translation: AAO64080.1
AY084626 mRNA Translation: AAM61189.1
PIRiT02332
RefSeqiNP_001031480.1, NM_001036403.1 [O64702-2]
NP_001318353.1, NM_001336514.1 [O64702-1]
NP_001324951.1, NM_001336515.1 [O64702-1]
NP_565788.1, NM_128997.3 [O64702-1]
UniGeneiAt.37803

Genome annotation databases

EnsemblPlantsiAT2G34450.1; AT2G34450.1; AT2G34450 [O64702-1]
AT2G34450.2; AT2G34450.2; AT2G34450 [O64702-2]
AT2G34450.3; AT2G34450.3; AT2G34450 [O64702-1]
AT2G34450.4; AT2G34450.4; AT2G34450 [O64702-1]
GeneIDi818008
GrameneiAT2G34450.1; AT2G34450.1; AT2G34450 [O64702-1]
AT2G34450.2; AT2G34450.2; AT2G34450 [O64702-2]
AT2G34450.3; AT2G34450.3; AT2G34450 [O64702-1]
AT2G34450.4; AT2G34450.4; AT2G34450 [O64702-1]
KEGGiath:AT2G34450

Keywords - Coding sequence diversityi

Alternative splicing

Similar proteinsi

Entry informationi

Entry nameiHMG14_ARATH
AccessioniPrimary (citable) accession number: O64702
Secondary accession number(s): Q2V430
Entry historyiIntegrated into UniProtKB/Swiss-Prot: November 2, 2010
Last sequence update: June 1, 2002
Last modified: April 25, 2018
This is version 116 of the entry and version 2 of the sequence. See complete history.
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programPlant Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome
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Main funding by: National Institutes of Health