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Protein
Submitted name:

Putative uncharacterized protein At2g18900

Gene

At2g18900

Organism
Arabidopsis thaliana (Mouse-ear cress)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Names & Taxonomyi

Protein namesi
Submitted name:
Putative uncharacterized protein At2g18900Imported
Gene namesi
Ordered Locus Names:At2g18900Imported
OrganismiArabidopsis thaliana (Mouse-ear cress)
Taxonomic identifieri3702 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaeudicotyledonsGunneridaePentapetalaerosidsmalvidsBrassicalesBrassicaceaeCamelineaeArabidopsis

PTM / Processingi

Proteomic databases

PaxDbiO64620.

Interactioni

Protein-protein interaction databases

STRINGi3702.AT2G18900.1.

Structurei

3D structure databases

ProteinModelPortaliO64620.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini279 – 320WD_REPEATS_REGIONInterPro annotationAdd BLAST42

Phylogenomic databases

eggNOGiKOG1963. Eukaryota.
ENOG410YY9G. LUCA.
HOGENOMiHOG000030672.

Family and domain databases

Gene3Di2.130.10.10. 3 hits.
InterProiIPR015943. WD40/YVTN_repeat-like_dom.
IPR001680. WD40_repeat.
IPR017986. WD40_repeat_dom.
[Graphical view]
PfamiPF00400. WD40. 2 hits.
[Graphical view]
SMARTiSM00320. WD40. 5 hits.
[Graphical view]
SUPFAMiSSF50978. SSF50978. 4 hits.
PROSITEiPS50082. WD_REPEATS_2. 2 hits.
PS50294. WD_REPEATS_REGION. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

O64620-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MKRGGRSYVT SPPSFSNDAK KLLVCTGNTV SVFSAATGLQ ITSLEGHTAP
60 70 80 90 100
VTTLIVVPAS SPAQKILCYC WTASLDGTIR HWDFSGPELL KTIDAQLPIY
110 120 130 140 150
SMVIPSLLSE PQQIDKRREL SGKLVAYVSV EDISVVNQGS KELRGHIRRF
160 170 180 190 200
NLAKSRIPRG DTLKETAEPE SIVISPSGEF FGIRHKCKIH IWDVPSGGSR
210 220 230 240 250
HAVSRKMTLH HTKVINAFAF HPTERVIAAG DVTGRVLIWR GFGNRKLALG
260 270 280 290 300
NQKKKVRAMV DLDNAGVRGE DDAESCTTWH WHSAEVNVLN FSSDGAYLYS
310 320 330 340 350
GGREGVLVVW QLDTGKKKFL PRIGSPLLYF MWSPDPTLSS VVCADNQIHL
360 370 380 390 400
LKMPSMEILR TISGIKPPPS LPRMYEGLAS TVAFDRSSGI AALCTENYCV
410 420 430 440 450
QLYNLLNDRG ISEIQVCERN HQPGDEITVV VTAVALSLDG SVMSTTEVKL
460 470 480 490 500
PEDGIGGLVS LKFWASEPDS KTFTLSTIVY EPHRDAGVSA IVFHPTRSMA
510 520 530 540 550
VSTSFGGDFK IWVCNSDKNQ TDKDSSWICH AVGSYKKKPM TAAAFSGDGT
560 570 580 590 600
VMAVAAENVI TLWNPDKNIL LSVLGSTLTP ITKLCFAGKS EFLVAASHIP
610 620 630 640 650
RPELSVWNTS KLSLSWSYGL RIEENACSRS IAVTSAVDSS AFAVLAVIPK
660 670 680 690 700
TFKTDESKEN IFRGRDGAIL LFNGSDPKPV SIWTVMKARG GSISFLEGDK
710 720 730 740 750
SQLRLAYVNG SHEYVVFDPN SDESHERSAV DYDGLAGLEE TGDAGYTSLY
760 770 780 790 800
GQLPDYDKKR MEDVESLGTP FVSSERPWET IFSGSTLNFP PLQKLCAEFF
810
ESLMEKRTAV VE
Length:812
Mass (Da):88,873
Last modified:August 1, 1998 - v1
Checksum:i2AFA0C6C84AD453F
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AC003673 Genomic DNA. Translation: AAC09025.1.
PIRiT01618.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AC003673 Genomic DNA. Translation: AAC09025.1.
PIRiT01618.

3D structure databases

ProteinModelPortaliO64620.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi3702.AT2G18900.1.

Proteomic databases

PaxDbiO64620.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Phylogenomic databases

eggNOGiKOG1963. Eukaryota.
ENOG410YY9G. LUCA.
HOGENOMiHOG000030672.

Family and domain databases

Gene3Di2.130.10.10. 3 hits.
InterProiIPR015943. WD40/YVTN_repeat-like_dom.
IPR001680. WD40_repeat.
IPR017986. WD40_repeat_dom.
[Graphical view]
PfamiPF00400. WD40. 2 hits.
[Graphical view]
SMARTiSM00320. WD40. 5 hits.
[Graphical view]
SUPFAMiSSF50978. SSF50978. 4 hits.
PROSITEiPS50082. WD_REPEATS_2. 2 hits.
PS50294. WD_REPEATS_REGION. 1 hit.
[Graphical view]
ProtoNetiSearch...

Entry informationi

Entry nameiO64620_ARATH
AccessioniPrimary (citable) accession number: O64620
Entry historyi
Integrated into UniProtKB/TrEMBL: August 1, 1998
Last sequence update: August 1, 1998
Last modified: October 5, 2016
This is version 103 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.