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Protein
Submitted name:

Prdl-a protein

Gene

prdl-a

Organism
Hydra vulgaris (Hydra) (Hydra attenuata)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

Regions

Feature keyPosition(s)DescriptionActionsGraphical viewLength
DNA bindingi40 – 99HomeoboxPROSITE-ProRule annotationAdd BLAST60

GO - Molecular functioni

GO - Biological processi

Keywordsi

Molecular functionDNA-bindingPROSITE-ProRule annotation

Names & Taxonomyi

Protein namesi
Submitted name:
Prdl-a proteinImported
Gene namesi
Name:prdl-aImported
OrganismiHydra vulgaris (Hydra) (Hydra attenuata)Imported
Taxonomic identifieri6087 [NCBI]
Taxonomic lineageiEukaryotaMetazoaCnidariaHydrozoaHydroidolinaAnthoathecataAplanulataHydridaeHydra

Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertionGraphics by Christian Stolte; Source: COMPARTMENTS

Keywords - Cellular componenti

NucleusPROSITE-ProRule annotation

Structurei

3D structure databases

ProteinModelPortaliO62545.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini38 – 98HomeoboxInterPro annotationAdd BLAST61

Keywords - Domaini

HomeoboxPROSITE-ProRule annotation

Family and domain databases

CDDicd00086. homeodomain. 1 hit.
InterProiView protein in InterPro
IPR009057. Homeobox-like.
IPR017970. Homeobox_CS.
IPR001356. Homeobox_dom.
PfamiView protein in Pfam
PF00046. Homeobox. 1 hit.
SMARTiView protein in SMART
SM00389. HOX. 1 hit.
SUPFAMiSSF46689. SSF46689. 1 hit.
PROSITEiView protein in PROSITE
PS00027. HOMEOBOX_1. 1 hit.
PS50071. HOMEOBOX_2. 1 hit.

Sequencei

Sequence statusi: Complete.

O62545-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MTLLGMLPSS QEENSNFSDF KEIKGEEYQN QRFSNGKRNE RRYRTTFTQF
60 70 80 90 100
QLDELERAFD KTHYPDVFMR EELAVRVHLT EARVQVWFQN RRAKWRKREK
110 120 130 140 150
LSYNVHQQQH GSNGEVSSPY HISTSPKIQS QQRPVSSQMP TPLSHHTAFQ
160 170 180 190 200
PWAQSPYCPQ STSPYPQYPH YQQSSMIGNY ARPSSYQYMS HHTGSVISST
210 220
PENLSPQDSQ FTGHSSFNNL KGQNQLIFA
Length:229
Mass (Da):26,758
Last modified:August 1, 1998 - v1
Checksum:iDEEF1037100FE4E7
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
Y15515 Genomic DNA. Translation: CAA75668.1.

Similar proteinsi

Entry informationi

Entry nameiO62545_HYDVU
AccessioniPrimary (citable) accession number: O62545
Entry historyiIntegrated into UniProtKB/TrEMBL: August 1, 1998
Last sequence update: August 1, 1998
Last modified: September 27, 2017
This is version 86 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)