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Protein
Submitted name:

SORBin homolog

Gene

sorb-1

Organism
Caenorhabditis elegans
Status
Unreviewed-Annotation score: -Experimental evidence at protein leveli

Functioni

GO - Biological processi

Enzyme and pathway databases

SignaLinkiO62482

Names & Taxonomyi

Protein namesi
Submitted name:
SORBin homologImported
Gene namesi
Name:sorb-1Imported
ORF Names:CELE_Y45F10D.13Imported, Y45F10D.13Imported
OrganismiCaenorhabditis elegansImported
Taxonomic identifieri6239 [NCBI]
Taxonomic lineageiEukaryotaMetazoaEcdysozoaNematodaChromadoreaRhabditidaRhabditoideaRhabditidaePeloderinaeCaenorhabditis
Proteomesi
  • UP000001940 Componenti: Chromosome IV

Organism-specific databases

WormBaseiY45F10D.13c ; CE39436 ; WBGene00012891 ; sorb-1

PTM / Processingi

Proteomic databases

EPDiO62482
PeptideAtlasiO62482

Expressioni

Gene expression databases

BgeeiWBGene00012891
ExpressionAtlasiO62482 baseline and differential

Interactioni

Binary interactionsi

Show more details

Protein-protein interaction databases

DIPiDIP-24971N
IntActiO62482 54 interactors.
MINTiO62482

Structurei

3D structure databases

ProteinModelPortaliO62482
SMRiO62482
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini151 – 210SH3InterPro annotationAdd BLAST60
Domaini213 – 273SH3InterPro annotationAdd BLAST61
Domaini414 – 473SH3InterPro annotationAdd BLAST60

Coiled coil

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Coiled coili78 – 110Sequence analysisAdd BLAST33

Keywords - Domaini

Coiled coilSequence analysis, SH3 domainPROSITE-ProRule annotation

Phylogenomic databases

GeneTreeiENSGT00760000119190
OMAiTISINFR
PhylomeDBiO62482

Family and domain databases

InterProiView protein in InterPro
IPR036028 SH3-like_dom_sf
IPR001452 SH3_domain
IPR028506 Sorbin_SH3
PANTHERiPTHR45043 PTHR45043, 3 hits
PfamiView protein in Pfam
PF14604 SH3_9, 3 hits
PRINTSiPR00452 SH3DOMAIN
SMARTiView protein in SMART
SM00326 SH3, 3 hits
SUPFAMiSSF50044 SSF50044, 3 hits
PROSITEiView protein in PROSITE
PS50002 SH3, 3 hits

Sequencei

Sequence statusi: Complete.

O62482-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MCDLPKKDVE FKEIDAIYEN MKIKNSQRQR SQNSLDLIRI TNNLDETTKS
60 70 80 90 100
LNLYLQQIDA TWKRSKSQPI MKGPNDQYNN QERVKQSNEE ELLRLKAEKL
110 120 130 140 150
AEELRKEKER KHSFIPSSAP SLQNNMDRLN SLLYDFSSDI QEPAHRDYTP
160 170 180 190 200
QPVMTATAVY KFEPRSAREL PLNRGDIIRI IREVDGYWME GERNGRSGIF
210 220 230 240 250
PTSYVQINTG NQGDSQKMRA IYPFTARSDT ELSLKRGEII TRRRQIDSNW
260 270 280 290 300
LEGSNQIGIV GIFPASYVEP IEQVEQHIPT IVPNRPKTPK IEDQVYNQVY
310 320 330 340 350
KPNETVIMQS NQGYYDKAAV VPNNKVRFDL PSGSDSNLQM SLNPHQNQFP
360 370 380 390 400
PTHTQTSTQQ PSNYGMKKIE YEREKVVEEV PPMHMDQYRK LNDEPKNPKK
410 420 430 440 450
DTNILMNAAS LIPKGSEMYR AVYPYQPQKE DELQLYTNDI IFVVEKCDDG
460 470
WFIGTSLRTG DFGIFPGNYV KRH
Length:473
Mass (Da):54,867
Last modified:December 20, 2005 - v2
Checksum:iD20A611556410173
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BX284604 Genomic DNA Translation: CAA16388.2
PIRiT26940
RefSeqiNP_001255756.1, NM_001268827.1
UniGeneiCel.24633

Genome annotation databases

EnsemblMetazoaiY45F10D.13c; Y45F10D.13c; WBGene00012891
GeneIDi3565590
UCSCiY45F10D.13b c. elegans

Similar proteinsi

Entry informationi

Entry nameiO62482_CAEEL
AccessioniPrimary (citable) accession number: O62482
Entry historyiIntegrated into UniProtKB/TrEMBL: August 1, 1998
Last sequence update: December 20, 2005
Last modified: February 28, 2018
This is version 154 of the entry and version 2 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Proteomics identificationCombined sources, Reference proteomeImported