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Reviewed, UniProtKB/Swiss-Prot O62431 (SYQ_CAEEL)

Last modified February 9, 2010. Version 70. Feed History...

Clusters with 100%, 90%, 50% identity | Documents (3) | Third-party data | Customize display text xml rdf/xml gff fasta
Names and origin · Protein attributes · General annotation (Comments) · Ontologies · Sequence annotation (Features) · Sequences · References · Cross-references · Entry information · Relevant documents

Names and origin

Protein namesRecommended name:
    Probable glutaminyl-tRNA synthetase
    EC=6.1.1.18
Alternative name(s):
    Glutamine--tRNA ligase
      Short name=GlnRS
Gene names
Name: ers-1
Synonyms: qrs-5
ORF Names: Y41E3.4
OrganismCaenorhabditis elegans [Complete proteome]
Taxonomic identifier6239 [NCBI]
Taxonomic lineageEukaryotaMetazoaNematodaChromadoreaRhabditidaRhabditoideaRhabditidaePeloderinaeCaenorhabditis

Protein attributes

Sequence length786 AA.
Sequence statusComplete.
Protein existenceInferred from homology.

General annotation (Comments)

Catalytic activity

ATP + L-glutamine + tRNA(Gln) = AMP + diphosphate + L-glutaminyl-tRNA(Gln).

Sequence similarities

Belongs to the class-I aminoacyl-tRNA synthetase family.

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Chain1 – 786786Probable glutaminyl-tRNA synthetase
PRO_0000195861

Regions

Motif276 – 28611"HIGH" region
Motif499 – 5035"KMSKS" region

Sites

Binding site5021ATP By similarity

Sequences

Sequence LengthMass (Da)Tools
O62431-1 [UniParc].

Last modified August 1, 1998. Version 1.
Checksum: D00F343D845F4B47

FASTA78688,262
        10         20         30         40         50         60 
MATKEELLSL GLSDSKVAET LKNVKLTETI GSIVKLASES GEISKQKGTL LYQLATKLKP 

        70         80         90        100        110        120 
QVAAHTPLVV KYIMNDGIKT EPQLSAAIEY LLSHTVKGIQ VPDFEKSCGV GVVVTIDDIE 

       130        140        150        160        170        180 
AAVTKVIGQH REKIVAERYS FPAGKLLGEL RALLPWADGA ITKKEVDLRF LELLGPKTAE 

       190        200        210        220        230        240 
DLAPKKKEKK PEGPKPSKDA AAAATAPGTK NQKEASPEEF ADGAETMDEL LRTRAHFHKV 

       250        260        270        280        290        300 
GENFKQDGYV TTPKTAELLK AHVAAVGGKV VTRFPPEPNG VLHIGHAKAI NINFGYAKAM 

       310        320        330        340        350        360 
GGVCNLRFDD TNPEKEEEKF FSAIEDIVHW LGYDPARVTH SSDNFQQLYL WAVKLIQKGL 

       370        380        390        400        410        420 
AFVCHQKVEE MRGFEVQLSP WRERPIEENI QLFEDMKNGK FDEGEATLRL KLTLEEGKVD 

       430        440        450        460        470        480 
PVAYRIKYVP HHRTGNQWCI YPTYDYTHCL CDSIENITHS LCTKEFQSRR SSYYWLCNAL 

       490        500        510        520        530        540 
DIYCPVQWEY GRLNVNYTVV SKRKILKLIT TKTVNDWDDP RLFTLTALRR RGIPSEAINR 

       550        560        570        580        590        600 
FVAKLGLTMS QMVIDPHVLD ATVRDYLNIH APRTMAVLEG LKLTIENFSE LNLPSSVDVP 

       610        620        630        640        650        660 
DFPSDPTDPR KHSVSVDREI FIEKSDYKPD DSDKSFRRLT PKQAVGLKHI GLVLRFVKEV 

       670        680        690        700        710        720 
KDAEGHVTEV VVKAEKLSEK DKPKAFIHWV AKPVSCEVRL YDRLFKSKNP EDAQLVPGGF 

       730        740        750        760        770        780 
LSDINPDSLT VVYNALIDQS IAKSKVYDRF QFERIGFFCV DRDSTSSTLV FNRTVMLKDG 


GASGKN 

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References

[1]"Genome sequence of the nematode C. elegans: a platform for investigating biology."
The C. elegans sequencing consortium
Science 282:2012-2018(1998) [PubMed: 9851916] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: Bristol N2.
+Additional computationally mapped references.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
Z95559 Genomic DNA. Translation: CAB08998.1.
PIRT26811.
RefSeqNP_502812.1.
UniGeneCel.7782

3D structure databases

SMRO62431. Positions 258-780.
ModBaseSearch...

Protein-protein interaction databases

STRINGO62431.

Genome annotation databases

EnsemblY41E3.4; Y41E3.4; Y41E3.4; Caenorhabditis elegans. [Genome view]
GeneID178415.
KEGGcel:Y41E3.4.
UCSCY41E3.4. c. elegans.

Organism-specific databases

CTD178415.
WormBaseWBGene00001336. ers-1.
WormPepY41E3.4. CE18372. [WorfDB]

Phylogenomic databases

eggNOGmeNOG05516.
HOGENOMHBG334108.
InParanoidO62431.
OMARMPTIAG.
PhylomeDBO62431.

Enzyme and pathway databases

BRENDA6.1.1.18. 672.

Family and domain databases

InterProIPR001412. aa-tRNA-synth_I_CS.
IPR004514. Gln-tRNA-synth_Ic.
IPR007639. Gln-tRNA-synth_Ic_RNA-bd_1.
IPR007638. Gln-tRNA-synth_Ic_RNA-bd_2.
IPR000924. Glu/Gln-tRNA-synth_Ic.
IPR020058. Glu/Gln-tRNA-synth_Ic_cat-dom.
IPR020059. Glu/Gln-tRNA-synth_Ic_codon-bd.
IPR020060. Glu/Gln-tRNA-synth_Ic_N.
IPR020056. Rbsml_L25/Gln-tRNA_synth_b-brl.
IPR011035. Ribosomal_L25/Gln-tRNA_synth.
IPR014729. Rossmann-like_a/b/a_fold.
[Graphical view]
Gene3DG3DSA:2.40.240.10. Rbsml_L25/Gln-tRNA_synth_b-brl. 1 hit.
G3DSA:3.40.50.620. Rossmann-like_a/b/a_fold. 1 hit.
PANTHERPTHR10119:SF3. GlnS. 1 hit.
PTHR10119. Glu_tRNA-synt_1c. 1 hit.
PfamPF00749. tRNA-synt_1c. 1 hit.
PF03950. tRNA-synt_1c_C. 1 hit.
PF04558. tRNA_synt_1c_R1. 1 hit.
PF04557. tRNA_synt_1c_R2. 1 hit.
[Graphical view]
PRINTSPR00987. TRNASYNTHGLU.
TIGRFAMsTIGR00440. glnS. 1 hit.
PROSITEPS00178. AA_TRNA_LIGASE_I. 1 hit.
[Graphical view]
ProtoNetSearch...

Other Resources

NextBio901048.

Entry information

Entry nameSYQ_CAEEL
AccessionPrimary (citable) accession number: O62431
Entry history
Integrated into UniProtKB/Swiss-Prot: December 1, 2000
Last sequence update: August 1, 1998
Last modified: February 9, 2010
This is version 70 of the entry and version 1 of the sequence. [Complete history]
Entry statusReviewed (UniProtKB/Swiss-Prot)
Annotation projectCaenorhabditis annotation project

Relevant documents

Aminoacyl-tRNA synthetases

List of aminoacyl-tRNA synthetase entries

Caenorhabditis elegans

Caenorhabditis elegans: entries, gene names and cross-references to WormPep

SIMILARITY comments

Index of protein domains and families

Names and origin · Protein attributes · General annotation (Comments) · Ontologies · Sequence annotation (Features) · Sequences · References · Cross-references · Entry information · Relevant documents