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Protein
Submitted name:

FEZ Family zinc finger protein

Gene

fezf-1

Organism
Caenorhabditis elegans
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

GO - Molecular functioni

Complete GO annotation...

Names & Taxonomyi

Protein namesi
Submitted name:
FEZ Family zinc finger proteinImported
Gene namesi
Name:fezf-1Imported
ORF Names:CELE_Y38H8A.5Imported, Y38H8A.5Imported
OrganismiCaenorhabditis elegansImported
Taxonomic identifieri6239 [NCBI]
Taxonomic lineageiEukaryotaMetazoaEcdysozoaNematodaChromadoreaRhabditidaRhabditoideaRhabditidaePeloderinaeCaenorhabditis
Proteomesi
  • UP000001940 Componenti: Chromosome IV

Organism-specific databases

WormBaseiY38H8A.5; CE40825; WBGene00012639; fezf-1.

PTM / Processingi

Proteomic databases

PaxDbiO62425.

Interactioni

Protein-protein interaction databases

STRINGi6239.Y38H8A.5.

Structurei

3D structure databases

ProteinModelPortaliO62425.
SMRiO62425. Positions 4-31, 50-212.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Domaini52 – 7928C2H2-typeInterPro annotationAdd
BLAST
Domaini80 – 10728C2H2-typeInterPro annotationAdd
BLAST
Domaini108 – 13528C2H2-typeInterPro annotationAdd
BLAST
Domaini136 – 16328C2H2-typeInterPro annotationAdd
BLAST
Domaini164 – 19128C2H2-typeInterPro annotationAdd
BLAST
Domaini192 – 21827C2H2-typeInterPro annotationAdd
BLAST

Phylogenomic databases

eggNOGiKOG1721. Eukaryota.
COG5048. LUCA.
GeneTreeiENSGT00740000115096.
HOGENOMiHOG000234617.
InParanoidiO62425.
OMAiICNRAFH.
OrthoDBiEOG7Z0JW5.
PhylomeDBiO62425.

Family and domain databases

Gene3Di3.30.160.60. 6 hits.
InterProiIPR007087. Znf_C2H2.
IPR015880. Znf_C2H2-like.
IPR013087. Znf_C2H2/integrase_DNA-bd.
[Graphical view]
SMARTiSM00355. ZnF_C2H2. 6 hits.
[Graphical view]
PROSITEiPS00028. ZINC_FINGER_C2H2_1. 6 hits.
PS50157. ZINC_FINGER_C2H2_2. 6 hits.
[Graphical view]

Sequencei

Sequence statusi: Complete.

O62425-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MLKFSIEVLL ADSPSPKSLC RSSGIFPFPL PSSNSIFAES SSGDDENSRK
60 70 80 90 100
KFPCEICGKQ FNAHYNLTRH MPVHTGERPF VCKVCGKAFR QASTLCRHKI
110 120 130 140 150
IHTDSKPHKC KTCGKCFNRS STLNTHVRIH QGFKPFVCEI CGKGFHQNGN
160 170 180 190 200
YKNHRLTHED TKKFSCSICS RAFHQSYNLA FHMFTHEEHK PFTCHVCSKG
210
FCRNFDLKKH LRKMHMTQ
Length:218
Mass (Da):25,042
Last modified:May 1, 2007 - v3
Checksum:iFA4969C3E10B84A0
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BX284604 Genomic DNA. Translation: CAA16344.3.
PIRiT26715.
RefSeqiNP_502594.2. NM_070193.2.
UniGeneiCel.36847.

Genome annotation databases

EnsemblMetazoaiY38H8A.5; Y38H8A.5; WBGene00012639.
GeneIDi3564888.
KEGGicel:CELE_Y38H8A.5.
UCSCiY38H8A.5. c. elegans.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BX284604 Genomic DNA. Translation: CAA16344.3.
PIRiT26715.
RefSeqiNP_502594.2. NM_070193.2.
UniGeneiCel.36847.

3D structure databases

ProteinModelPortaliO62425.
SMRiO62425. Positions 4-31, 50-212.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi6239.Y38H8A.5.

Proteomic databases

PaxDbiO62425.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblMetazoaiY38H8A.5; Y38H8A.5; WBGene00012639.
GeneIDi3564888.
KEGGicel:CELE_Y38H8A.5.
UCSCiY38H8A.5. c. elegans.

Organism-specific databases

CTDi3564888.
WormBaseiY38H8A.5; CE40825; WBGene00012639; fezf-1.

Phylogenomic databases

eggNOGiKOG1721. Eukaryota.
COG5048. LUCA.
GeneTreeiENSGT00740000115096.
HOGENOMiHOG000234617.
InParanoidiO62425.
OMAiICNRAFH.
OrthoDBiEOG7Z0JW5.
PhylomeDBiO62425.

Miscellaneous databases

NextBioi954361.
PROiO62425.

Family and domain databases

Gene3Di3.30.160.60. 6 hits.
InterProiIPR007087. Znf_C2H2.
IPR015880. Znf_C2H2-like.
IPR013087. Znf_C2H2/integrase_DNA-bd.
[Graphical view]
SMARTiSM00355. ZnF_C2H2. 6 hits.
[Graphical view]
PROSITEiPS00028. ZINC_FINGER_C2H2_1. 6 hits.
PS50157. ZINC_FINGER_C2H2_2. 6 hits.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. "Genome sequence of the nematode C. elegans: a platform for investigating biology."
    Caenorhabditis elegans Sequencing Consortium
    Sulson J.E., Waterston R.
    Science 282:2012-2018(1998) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: Bristol N2Imported.

Entry informationi

Entry nameiO62425_CAEEL
AccessioniPrimary (citable) accession number: O62425
Entry historyi
Integrated into UniProtKB/TrEMBL: August 1, 1998
Last sequence update: May 1, 2007
Last modified: March 16, 2016
This is version 122 of the entry and version 3 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.