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Protein
Submitted name:

DEAD boX helicase homolog

Gene

ddx-19

Organism
Caenorhabditis elegans
Status
Unreviewed-Annotation score: Annotation score: 2 out of 5-Experimental evidence at protein leveli

Functioni

GO - Molecular functioni

GO - Biological processi

  • germ cell development Source: WormBase

Keywordsi

Molecular functionHelicaseImported, Hydrolase
LigandATP-binding, Nucleotide-binding

Names & Taxonomyi

Protein namesi
Submitted name:
DEAD boX helicase homologImported
Gene namesi
Name:ddx-19Imported
ORF Names:CELE_T07D4.4Imported, T07D4.4Imported
OrganismiCaenorhabditis elegansImported
Taxonomic identifieri6239 [NCBI]
Taxonomic lineageiEukaryotaMetazoaEcdysozoaNematodaChromadoreaRhabditidaRhabditoideaRhabditidaePeloderinaeCaenorhabditis
Proteomesi
  • UP000001940 Componenti: Chromosome II

Organism-specific databases

WormBaseiT07D4.4c; CE18221; WBGene00011580; ddx-19.

Subcellular locationi

GO - Cellular componenti

  • P granule Source: WormBase

PTM / Processingi

Proteomic databases

PaxDbiO62372.
PeptideAtlasiO62372.

Expressioni

Gene expression databases

BgeeiWBGene00011580.
ExpressionAtlasiO62372. baseline.

Structurei

3D structure databases

ProteinModelPortaliO62372.
SMRiO62372.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini209 – 237Q_MOTIFInterPro annotationAdd BLAST29
Domaini242 – 417Helicase ATP-bindingInterPro annotationAdd BLAST176
Domaini428 – 608Helicase C-terminalInterPro annotationAdd BLAST181

Motif

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Motifi209 – 237Q motifPROSITE-ProRule annotationAdd BLAST29

Phylogenomic databases

eggNOGiKOG0332. Eukaryota.
ENOG410XRGX. LUCA.
GeneTreeiENSGT00530000063236.
HOGENOMiHOG000268797.

Family and domain databases

InterProiView protein in InterPro
IPR011545. DEAD/DEAH_box_helicase_dom.
IPR014001. Helicase_ATP-bd.
IPR001650. Helicase_C.
IPR027417. P-loop_NTPase.
IPR014014. RNA_helicase_DEAD_Q_motif.
PfamiView protein in Pfam
PF00270. DEAD. 1 hit.
PF00271. Helicase_C. 1 hit.
SMARTiView protein in SMART
SM00487. DEXDc. 1 hit.
SM00490. HELICc. 1 hit.
SUPFAMiSSF52540. SSF52540. 1 hit.
PROSITEiView protein in PROSITE
PS51192. HELICASE_ATP_BIND_1. 1 hit.
PS51194. HELICASE_CTER. 1 hit.
PS51195. Q_MOTIF. 1 hit.

Sequencei

Sequence statusi: Complete.

O62372-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MADWGIAFDE QCRSEGLEVP EKTEKVQSGS EMDQNEENKG SNGWGISRGG
60 70 80 90 100
MFGGPKASNA PPPQTSFGST SGTRVGVPIM PGQSQPMRGG FQGAYRGGRG
110 120 130 140 150
SGGGQMDFGA PGQGQSMGRG RGQQNPAFVP RPRDTPPQYG GHQAAQQFVK
160 170 180 190 200
PDSKYKFTKP ATEEAHEQVP VPADIALLNK FIQKEVKMMK DVVVDVQRQD
210 220 230 240 250
PKSPLYSISS FRELRLKPEV LKALDTMNFQ FPTRIQETAL PLLLMEPPSN
260 270 280 290 300
LIAQAQSGTG KTAAFVLTML CRIDVNLMCP QCICLAPTLE LAKQIGEVVE
310 320 330 340 350
KMGKFIDNLK IHYAIKGGNM AAMRGRKLTE QIVIGTPGIT RDYLQKYKCI
360 370 380 390 400
DPSKIRCLVL DEADVMIYHQ GFTDISTTIY NMVEDASDSV QSMLFSATYD
410 420 430 440 450
EPVINFATKI IKNAIVVMLK REEQALPNIK QFYVQCACRD SKYAAIVNLY
460 470 480 490 500
SGLAVASSVI FCHTKASVMW LYENMRARGH QVDVLHGDMT VVERADTIIH
510 520 530 540 550
FKRGDFKVLI TTNVFARGID VAQVSVVINY DLPIKYTDEG TPMVVDGFTQ
560 570 580 590 600
PDCETYLHRI GRTGRFGKTG IAINLIDSED SMNMINVLEN HFQMKIARMD
610
PSNLVELEAI EMA
Length:613
Mass (Da):67,727
Last modified:August 1, 1998 - v1
Checksum:i07A174B4CC54109E
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BX284602 Genomic DNA. Translation: CAA90407.1.
PIRiT24662.
RefSeqiNP_495893.1. NM_063492.1.
UniGeneiCel.7700.

Genome annotation databases

EnsemblMetazoaiT07D4.4c; T07D4.4c; WBGene00011580.
GeneIDi174418.
UCSCiT07D4.4b.1. c. elegans.

Similar proteinsi

Entry informationi

Entry nameiO62372_CAEEL
AccessioniPrimary (citable) accession number: O62372
Entry historyiIntegrated into UniProtKB/TrEMBL: August 1, 1998
Last sequence update: August 1, 1998
Last modified: August 30, 2017
This is version 137 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Proteomics identificationCombined sources, Reference proteomeImported