Unreviewed, UniProtKB/TrEMBL O62328 (O62328_CAEEL)

Names and origin

Protein names

Submitted name:
    Protein R05H10.6, partially confirmed by transcript evidence EMBL CAB05582.3

Gene names

Name:	cdh-7 EMBL CAB05582.3
ORF Names:	R05H10.6 EMBL CAB05582.3

Organism

Caenorhabditis elegans [Complete proteome] EMBL CAB05582.3

Taxonomic identifier

6239 [NCBI]

Taxonomic lineage

Eukaryota › Metazoa › Nematoda › Chromadorea › Rhabditida › Rhabditoidea › Rhabditidae › Peloderinae › Caenorhabditis

Protein attributes

Sequence length	1364 AA.
Sequence status	Complete.
Protein existence	Evidence at transcript level.

Ontologies

Keywords
Cellular component	Membrane
Domain	Transmembrane Spearmint SPM002126
Ligand	Calcium RuleBase RU000484V3
Technical term	Complete proteome
Gene Ontology (GO)
Biological process	homophilic cell adhesion Inferred from electronic annotation. Source: InterPro
Cellular component	integral to membrane Inferred from electronic annotation. Source: UniProtKB-KW plasma membrane Inferred from electronic annotation. Source: InterPro
Molecular function	calcium ion binding Inferred from electronic annotation. Source: UniProtKB-KW
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	O62328-1 [UniParc]. Last modified March 29, 2005. Version 3. Checksum: ED81302FAC8ABB6A	FASTA	1,364	150,864
	10 20 30 40 50 60 MREEGILLLL LLPLLVYGDL LSIPSTTFKI PRNAQEGDLI IGPEFIRASE DIDEALNLEL 70 80 90 100 110 120 EGTNPSPIAI NGSIIDAGQP VKFILVNKNA FDSGKSKVKL QAIGVISGKV QEETINFEVE 130 140 150 160 170 180 ASSDLPSIPE ISNFVVKSDF QEKETAIVRV SSPIPPNSEL DILGSYAQRV TATFEDDKII 190 200 210 220 230 240 LNTVPCHADT PCEVTFPFVV ILVLRNGENH VEALLTFQEE KKSSLKMAQK LYQTTIEEHT 250 260 270 280 290 300 GEQDHLVKIS TKGGSSEVLY SLRDASGLFS IHPKEGILSI LHPEFLSISS FGDTVNLTVV 310 320 330 340 350 360 ATDGDKTADA MINVKIVPEV EKNVVFGFEK ESYDITAENI NSILGNIKAK SASPVVYRIT 370 380 390 400 410 420 EGRIDLYKVE PNGDLVYTGK MVKGDREDDV TVVVQQGGLK MASTKVHINL KGIGSNPVST 430 440 450 460 470 480 SDELEKIELI SSEDPNGVVV TLIQFQDEDK DAKLTYELTM ENGVDENGNM IPLQEQLFEI 490 500 510 520 530 540 KSEEKVAHLV VSGNLKTSKI TTILLKITAR DSTHPKEPSV TVTRLIVIQR EKSEEEPMGL 550 560 570 580 590 600 NLIPLPTEIL VPVDSAVGSF IYKVTVLPMK ENLQYSIEPE HLFQILDDGS IVTQKELTVE 610 620 630 640 650 660 AEQLKIHVEV SDGSEKKSTE TTLTLKKTLH PHFTESRYDV TLPRQTPKDS VITVVSAVGG 670 680 690 700 710 720 NGEPVNQFVL KKGGHSKHFK IDEKGALRLA DEQERFDDLD DEMDLLVALA ENPTISVPVH 730 740 750 760 770 780 ISLKKNRNPR IDLVENQIFA TVYDNLPINS YVGKVEVASK ELVKFEMTSD EKGMSSLFGI 790 800 810 820 830 840 EEDGTIRSKD WLAGSEGMHK FSVLASNIDQ AGVRSANATV VIDVIKSNEC SPKFKRDENL 850 860 870 880 890 900 IFYVRENTPI DTVIGKVSAD VLPGKCALEY SIIGPNSEIL SINSANGELK TSKEFDFEKQ 910 920 930 940 950 960 KSYLLTLKLV AGKYNSVESG AELKILDVDD HEVKFELQEQ TVEIPEDAPL NTVVATVKAT 970 980 990 1000 1010 1020 EGDESQEVFY HLKAGSPPQF SLNSKTGEVM VEQALDREAL DNFEIEIGAS NSVDLIGTAA 1030 1040 1050 1060 1070 1080 MKLLVKVKDV NDNGPTFDRP QYFTVVSKDT VVGAELLELN AYDPDLSDQE KKLEYTVTAS 1090 1100 1110 1120 1130 1140 SFEYRGMSRN VEDVLDIRGG ENPKIYLSKP LTDYVGGVFN VQLQVRDTVD GTIGKSALRV 1150 1160 1170 1180 1190 1200 YVHDSSDLLS LELPYSPSTV SQGVIQEFTE NLSNSTGLTA IPKSVYYKAP HGIMSTNSID 1210 1220 1230 1240 1250 1260 LQVIFFNKSM SEIVPAERIL AMQDMRQDKH QPILRKPASP YLMTSEDPRS DTLIQPELFF 1270 1280 1290 1300 1310 1320 MVLGFLVLLA ITLALCGMMA CFARSRFLRE KRIMENEMAI KDAIQFPSNR SPALVSFKHF 1330 1340 1350 1360 APPSAEMYRN HEEHMYRSPN LNEKIGSYAV QQATITVAEH EEKI

References

[1]	"Genome sequence of the nematode C. elegans: a platform for investigating biology." The C. elegans sequencing consortium Science 282:2012-2018(1998) [PubMed: 9851916] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: Bristol N2.
+	Additional computationally mapped references.

Cross-references

Sequence databases
EMBL GenBank DDBJ	Z83119 Genomic DNA. Translation: CAB05582.3.
PIR	T23937.
RefSeq	NP_497075.2.
UniGene	Cel.14640
3D structure databases
SMR	O62328. Positions 844-1011, 941-1128.
ModBase	Search...
Genome annotation databases
Ensembl	R05H10.6; R05H10.6; R05H10.6; Caenorhabditis elegans. [Genome view]
GeneID	175143.
KEGG	cel:R05H10.6.
NMPDR	fig|6239.3.peg.8300.
UCSC	R05H10.6. c. elegans.
Organism-specific databases
CTD	175143.
WormBase	WBGene00000399. cdh-7.
WormPep	R05H10.6. CE38092. [WorfDB]
Phylogenomic databases
eggNOG	KOG3594.
InParanoid	O62328.
OMA	LELPYSP.
Gene expression databases
ArrayExpress	O62328.
Family and domain databases
InterPro	IPR002126. Cadherin. IPR015919. Cadherin-like. IPR020894. Cadherin_CS. [Graphical view]
Gene3D	G3DSA:2.60.40.60. Cadherin. 3 hits.
Pfam	PF00028. Cadherin. 1 hit. [Graphical view]
PRINTS	PR00205. CADHERIN.
SMART	SM00112. CA. 4 hits. [Graphical view]
PROSITE	PS00232. CADHERIN_1. 1 hit. PS50268. CADHERIN_2. 5 hits. [Graphical view]
ProtoNet	Search...
Other Resources
NextBio	886950.

Entry information

Entry name

O62328_CAEEL

Accession

Primary (citable) accession number: O62328

Entry history

Integrated into UniProtKB/TrEMBL:	August 1, 1998
Last sequence update:	March 29, 2005
Last modified:	February 9, 2010
This is version 61 of the entry and version 3 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)