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Protein
Submitted name:

Uncharacterized protein

Gene

CELE_F58G1.2

Organism
Caenorhabditis elegans
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Experimental evidence at protein leveli

Functioni

GO - Molecular functioni

Complete GO annotation...

Names & Taxonomyi

Protein namesi
Submitted name:
Uncharacterized proteinImported
Gene namesi
ORF Names:CELE_F58G1.2Imported, F58G1.2Imported
OrganismiCaenorhabditis elegansImported
Taxonomic identifieri6239 [NCBI]
Taxonomic lineageiEukaryotaMetazoaEcdysozoaNematodaChromadoreaRhabditidaRhabditoideaRhabditidaePeloderinaeCaenorhabditis
Proteomesi
  • UP000001940 Componenti: Chromosome II

Organism-specific databases

WormBaseiF58G1.2a; CE35561; WBGene00010264.

PTM / Processingi

Proteomic databases

PaxDbiO62276.

Expressioni

Gene expression databases

ExpressionAtlasiO62276. baseline and differential.

Interactioni

Protein-protein interaction databases

STRINGi6239.F58G1.2b.

Structurei

3D structure databases

ProteinModelPortaliO62276.
SMRiO62276. Positions 103-139, 230-258, 275-421.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Domaini112 – 13524C2H2-typeInterPro annotationAdd
BLAST
Domaini315 – 34329C2H2-typeInterPro annotationAdd
BLAST
Domaini344 – 36825C2H2-typeInterPro annotationAdd
BLAST

Phylogenomic databases

eggNOGiKOG1721. Eukaryota.
COG5048. LUCA.
GeneTreeiENSGT00840000130062.
HOGENOMiHOG000016582.
PhylomeDBiO62276.

Family and domain databases

Gene3Di3.30.160.60. 1 hit.
InterProiIPR007087. Znf_C2H2.
IPR015880. Znf_C2H2-like.
IPR013087. Znf_C2H2/integrase_DNA-bd.
[Graphical view]
SMARTiSM00355. ZnF_C2H2. 7 hits.
[Graphical view]
PROSITEiPS00028. ZINC_FINGER_C2H2_1. 5 hits.
PS50157. ZINC_FINGER_C2H2_2. 3 hits.
[Graphical view]

Sequencei

Sequence statusi: Complete.

O62276-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MKKETVAEAN DSGRNDVCCP RKKLTGVGEL LASLRNPPKI HKERIILGGD
60 70 80 90 100
GRPIKKLREN RAALNFIDPS AELDKCIVRQ KQQDFCAPDL NMVPASSLSI
110 120 130 140 150
DEIRNAVRKS MFRCKVCKNR FGEMSLLERH LRDSHPKAYI AFLENQREMA
160 170 180 190 200
DYMGELERER NRIEELVSGG FIPPESEIEA TSNNLEVDSI PLPGENSQGH
210 220 230 240 250
IPRLNRYGGL MYPMDALRKK FPYLKKRSPQ CPFCDKRFRN DISFNNHLTK
260 270 280 290 300
KHPECAEFVQ CLHCFKCLPS AADLPTHDCD LTYLCLDCRP IRNMCNGYRL
310 320 330 340 350
FRHRTKFHRG YHSGFRCPDC NQKFLTPRKL RKHRKMAHVF SRTFQCHFCE
360 370 380 390 400
EFFISDTAVT IHERVHTGIL KFECTVCDFR ASRYLQMEEH TKEHHGYMCS
410 420 430 440
VCQLKCQHWN DIKDHMLAEH SCYVTEEASQ VYIESPQIWL MYKGE
Length:445
Mass (Da):51,916
Last modified:July 5, 2004 - v2
Checksum:i16EA584F858C1175
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BX284602 Genomic DNA. Translation: CAB04525.2.
PIRiT22934.
RefSeqiNP_001254359.1. NM_001267430.1.
UniGeneiCel.7510.

Genome annotation databases

EnsemblMetazoaiF58G1.2a.1; F58G1.2a.1; WBGene00010264.
F58G1.2a.2; F58G1.2a.2; WBGene00010264.
F58G1.2a.3; F58G1.2a.3; WBGene00010264.
GeneIDi174931.
UCSCiF58G1.2.1. c. elegans.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BX284602 Genomic DNA. Translation: CAB04525.2.
PIRiT22934.
RefSeqiNP_001254359.1. NM_001267430.1.
UniGeneiCel.7510.

3D structure databases

ProteinModelPortaliO62276.
SMRiO62276. Positions 103-139, 230-258, 275-421.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi6239.F58G1.2b.

Proteomic databases

PaxDbiO62276.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblMetazoaiF58G1.2a.1; F58G1.2a.1; WBGene00010264.
F58G1.2a.2; F58G1.2a.2; WBGene00010264.
F58G1.2a.3; F58G1.2a.3; WBGene00010264.
GeneIDi174931.
UCSCiF58G1.2.1. c. elegans.

Organism-specific databases

CTDi174931.
WormBaseiF58G1.2a; CE35561; WBGene00010264.

Phylogenomic databases

eggNOGiKOG1721. Eukaryota.
COG5048. LUCA.
GeneTreeiENSGT00840000130062.
HOGENOMiHOG000016582.
PhylomeDBiO62276.

Miscellaneous databases

NextBioi886092.

Gene expression databases

ExpressionAtlasiO62276. baseline and differential.

Family and domain databases

Gene3Di3.30.160.60. 1 hit.
InterProiIPR007087. Znf_C2H2.
IPR015880. Znf_C2H2-like.
IPR013087. Znf_C2H2/integrase_DNA-bd.
[Graphical view]
SMARTiSM00355. ZnF_C2H2. 7 hits.
[Graphical view]
PROSITEiPS00028. ZINC_FINGER_C2H2_1. 5 hits.
PS50157. ZINC_FINGER_C2H2_2. 3 hits.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. "Genome sequence of the nematode C. elegans: a platform for investigating biology."
    Caenorhabditis elegans Sequencing Consortium
    Sulson J.E., Waterston R.
    Science 282:2012-2018(1998) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: Bristol N2Imported.

Entry informationi

Entry nameiO62276_CAEEL
AccessioniPrimary (citable) accession number: O62276
Entry historyi
Integrated into UniProtKB/TrEMBL: August 1, 1998
Last sequence update: July 5, 2004
Last modified: May 11, 2016
This is version 130 of the entry and version 2 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Proteomics identificationCombined sources, Reference proteomeImported

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.