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Protein
Submitted name:

C. Elegans Y-box

Gene

cey-1

Organism
Caenorhabditis elegans
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Experimental evidence at protein leveli

Functioni

GO - Molecular functioni

GO - Biological processi

Enzyme and pathway databases

ReactomeiR-CEL-72163. mRNA Splicing - Major Pathway.
R-CEL-72165. mRNA Splicing - Minor Pathway.

Names & Taxonomyi

Protein namesi
Submitted name:
C. Elegans Y-boxImported
Gene namesi
Name:cey-1Imported
ORF Names:CELE_F33A8.3Imported, F33A8.3Imported
OrganismiCaenorhabditis elegansImported
Taxonomic identifieri6239 [NCBI]
Taxonomic lineageiEukaryotaMetazoaEcdysozoaNematodaChromadoreaRhabditidaRhabditoideaRhabditidaePeloderinaeCaenorhabditis
Proteomesi
  • UP000001940 Componenti: Chromosome II

Organism-specific databases

WormBaseiF33A8.3; CE17755; WBGene00000472; cey-1.

Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertionGraphics by Christian Stolte; Source: COMPARTMENTS

PTM / Processingi

Proteomic databases

EPDiO62213.
PaxDbiO62213.
PeptideAtlasiO62213.

Expressioni

Gene expression databases

BgeeiWBGene00000472.

Interactioni

Protein-protein interaction databases

DIPiDIP-26200N.
IntActiO62213. 2 interactors.
MINTiMINT-1068354.
STRINGi6239.F33A8.3.1.

Structurei

3D structure databases

ProteinModelPortaliO62213.
SMRiO62213.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini22 – 90CSPInterPro annotationAdd BLAST69

Phylogenomic databases

eggNOGiKOG3070. Eukaryota.
COG1278. LUCA.
GeneTreeiENSGT00880000137907.
HOGENOMiHOG000016800.
InParanoidiO62213.
OMAiYGFINRT.
OrthoDBiEOG091G0W9A.

Family and domain databases

CDDicd04458. CSP_CDS. 1 hit.
InterProiView protein in InterPro
IPR019844. Cold-shock_CS.
IPR011129. CSD.
IPR002059. CSP_DNA-bd.
IPR012340. NA-bd_OB-fold.
PfamiView protein in Pfam
PF00313. CSD. 1 hit.
PRINTSiPR00050. COLDSHOCK.
SMARTiView protein in SMART
SM00357. CSP. 1 hit.
SUPFAMiSSF50249. SSF50249. 1 hit.
PROSITEiView protein in PROSITE
PS00352. COLD_SHOCK. 1 hit.

Sequencei

Sequence statusi: Complete.

O62213-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MAEKNDVAEQ PADKPVKATK VKGTVKWFNV KNGYGFINRT DTNEDIFVHQ
60 70 80 90 100
TAIINNNPNK YLRSLGDNEE VMFDIVEGSK GLEAASVTGP DGGPVQGSKY
110 120 130 140 150
AADRDAENAA RGRGGRGRGR RGGRGGIRHD SGSRDAEEGG APRGGGRGGS
160 170 180 190 200
RRGGGGRGGG RTNSGGEETA RDTDGGERGG RGGGRRGGRG RGGRGRGGRG

GQGGQSEA
Length:208
Mass (Da):21,349
Last modified:August 1, 1998 - v1
Checksum:i2A6C81AAE3D85FC8
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BX284602 Genomic DNA. Translation: CAB04257.1.
PIRiT21689.
RefSeqiNP_496366.1. NM_063965.4.
UniGeneiCel.17447.

Genome annotation databases

EnsemblMetazoaiF33A8.3; F33A8.3; WBGene00000472.
GeneIDi174690.
KEGGicel:CELE_F33A8.3.

Similar proteinsi

Entry informationi

Entry nameiO62213_CAEEL
AccessioniPrimary (citable) accession number: O62213
Entry historyiIntegrated into UniProtKB/TrEMBL: August 1, 1998
Last sequence update: August 1, 1998
Last modified: September 27, 2017
This is version 131 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Proteomics identificationCombined sources, Reference proteomeImported