Unreviewed, UniProtKB/TrEMBL O62107 (O62107_CAEEL)

Names and origin

Protein names

Submitted name:
    Protein C47B2.6a, confirmed by transcript evidence EMBL CAB16861.1

Gene names

Name:	gale-1 WormBase WBGene00008132
ORF Names:	C47B2.6 WormPep C47B2.6a, C47B2.6a EMBL CAB16861.1

Organism

Caenorhabditis elegans [Complete proteome]

Taxonomic identifier

6239 [NCBI]

Taxonomic lineage

Eukaryota › Metazoa › Nematoda › Chromadorea › Rhabditida › Rhabditoidea › Rhabditidae › Peloderinae › Caenorhabditis

Protein attributes

Sequence length	347 AA.
Sequence status	Complete.
Sequence processing	The displayed sequence is not processed.
Protein existence	Evidence at protein level.

General annotation (Comments)

Sequence similarities

Belongs to the sugar epimerase family. RuleBase RU003508V0

Ontologies

Keywords
Ligand	NAD RuleBase RU003508V0
Molecular function	Isomerase RuleBase RU004472V0
Technical term	Complete proteome
Gene Ontology (GO)
Biological process	galactose metabolic process Inferred from electronic annotation. Source: InterPro
Molecular function	UDP-glucose 4-epimerase activity Inferred from electronic annotation. Source: InterPro coenzyme binding Inferred from electronic annotation. Source: InterPro protein binding Inferred from physical interaction. Source: IntAct
Complete GO annotation...

Binary interactions

With	Entry	#Exp.	IntAct	Notes
C28H8.11	Q09474	1	EBI-316270,EBI-316265

Sequences

	Sequence		Length	Mass (Da)
	O62107-1 [UniParc]. Last modified August 1, 1998. Version 1. Checksum: 7F727FBFF7BE37AB	FASTA	347	37,683
	10 20 30 40 50 60 MHILVTGAAG FIGSHTVLEL LNSGYTVLCI DNFANAISDE HGNAISLKRV AQLTGKDVPF 70 80 90 100 110 120 QNVDVCDEAA LEKVFSENKF DGIIHLAALK AVGESVAKPL QYYSNNLVAS LNLIQMCLKY 130 140 150 160 170 180 NVKNFVFSSS ATVYGPPSEL PITEKSQTGQ GITNPYGQTK YMMEQILIDV GKANPEWNVV 190 200 210 220 230 240 LLRYFNPVGA HKSGLIGEDP KGVPNNLMPY VSQVAIGKLP VLTIYGDQFD TVDGTGVRDY 250 260 270 280 290 300 IHVVDLAKGH VKAFDRIKTV GNIGTEIYNL GTGVGYSVRQ MVDALKKVSG RDIPVKIGVP 310 320 330 340 RPGDVASVYC DPSLAQEKLG WRAETGLEEM CADLWNWQTK NPQGFSA

References

[1]	"Genome sequence of the nematode C. elegans: a platform for investigating biology." The C. elegans sequencing consortium Science 282:2012-2018(1998) [PubMed: 9851916] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: Bristol N2.

Cross-references

Sequence databases
EMBLGenBankDDBJ	Z99709 Genomic DNA. Translation: CAB16861.1.
PIR	T19989.
RefSeq	NP_001021051.1.
UniGene	Cel.6687
3D structure databases
HSSP	HSSP built from PDB template 1EK6 based on UniProtKB Q14376.
ModBase	Search...
Protein-protein interaction databases
DIP	DIP:26300N.
IntAct	O62107. 1 interaction.
Genome annotation databases
Ensembl	C47B2.6. Caenorhabditis elegans. [Contig view]
GeneID	173171.
KEGG	cel:C47B2.6.
NMPDR	fig|6239.3.peg.3430.
Organism-specific databases
WormBase	WBGene00008132. gale-1.
WormPep	C47B2.6a. CE17566. [WorfDB]
Gene expression databases
ArrayExpress	O62107.
Family and domain databases
InterPro	IPR001509. Epimerase_deHydtase. IPR005886. GalE. IPR016040. NAD(P)-bd_dom. IPR008089. Nuc_sugar_epim. [Graphical view]
Gene3D	G3DSA:3.40.50.720. NAD(P)-bd. 1 hit.
PANTHER	PTHR10366:SF39. GalE. 1 hit.
Pfam	PF01370. Epimerase. 1 hit. [Graphical view]
PRINTS	PR01713. NUCEPIMERASE.
TIGRFAMs	TIGR01179. galE. 1 hit.
ProtoNet	Search...
Other Resources
NextBio	878565.

Entry information

Entry name

O62107_CAEEL

Accession

Primary (citable) accession number: O62107

Entry history

Integrated into UniProtKB/TrEMBL:	August 1, 1998
Last sequence update:	August 1, 1998
Last modified:	June 16, 2009
This is version 55 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)