ID GANP_HUMAN Reviewed; 1980 AA. AC O60318; C9JL56; Q2M3C1; Q6PJP6; Q9BSY5; Q9UMT4; DT 30-MAY-2000, integrated into UniProtKB/Swiss-Prot. DT 30-MAY-2000, sequence version 2. DT 27-MAR-2024, entry version 193. DE RecName: Full=Germinal-center associated nuclear protein; DE Short=GANP; DE EC=2.3.1.48 {ECO:0000269|PubMed:23652018}; DE AltName: Full=80 kDa MCM3-associated protein; DE AltName: Full=MCM3 acetylating protein; DE Short=MCM3AP; DE EC=2.3.1.-; DE AltName: Full=MCM3 acetyltransferase; GN Name=MCM3AP; Synonyms=GANP, KIAA0572, MAP80; OS Homo sapiens (Human). OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; OC Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; OC Homo. OX NCBI_TaxID=9606; RN [1] RP NUCLEOTIDE SEQUENCE [MRNA], AND TISSUE SPECIFICITY. RX PubMed=11024281; DOI=10.1016/s0378-1119(00)00336-x; RA Abe E., Kuwahara K., Yoshida M., Suzuki M., Terasaki H., Matsuo Y., RA Takahashi E., Sakaguchi N.; RT "Structure, expression, and chromosomal localization of the human gene RT encoding a germinal center-associated nuclear protein (GANP) that RT associates with MCM3 involved in the initiation of DNA replication."; RL Gene 255:219-227(2000). RN [2] RP NUCLEOTIDE SEQUENCE [GENOMIC DNA], AND VARIANTS LEU-102; VAL-288; LEU-333; RP LEU-413; LEU-1051; MET-1062; TRP-1314; GLU-1449; ILE-1576; THR-1795; RP ARG-1870 AND VAL-1941. RG NIEHS SNPs program; RL Submitted (APR-2004) to the EMBL/GenBank/DDBJ databases. RN [3] RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RX PubMed=10830953; DOI=10.1038/35012518; RA Hattori M., Fujiyama A., Taylor T.D., Watanabe H., Yada T., Park H.-S., RA Toyoda A., Ishii K., Totoki Y., Choi D.-K., Groner Y., Soeda E., Ohki M., RA Takagi T., Sakaki Y., Taudien S., Blechschmidt K., Polley A., Menzel U., RA Delabar J., Kumpf K., Lehmann R., Patterson D., Reichwald K., Rump A., RA Schillhabel M., Schudy A., Zimmermann W., Rosenthal A., Kudoh J., RA Shibuya K., Kawasaki K., Asakawa S., Shintani A., Sasaki T., Nagamine K., RA Mitsuyama S., Antonarakis S.E., Minoshima S., Shimizu N., Nordsiek G., RA Hornischer K., Brandt P., Scharfe M., Schoen O., Desario A., Reichelt J., RA Kauer G., Bloecker H., Ramser J., Beck A., Klages S., Hennig S., RA Riesselmann L., Dagand E., Wehrmeyer S., Borzym K., Gardiner K., RA Nizetic D., Francis F., Lehrach H., Reinhardt R., Yaspo M.-L.; RT "The DNA sequence of human chromosome 21."; RL Nature 405:311-319(2000). RN [4] RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA], AND VARIANT LEU-102. RC TISSUE=Brain; RX PubMed=15489334; DOI=10.1101/gr.2596504; RG The MGC Project Team; RT "The status, quality, and expansion of the NIH full-length cDNA project: RT the Mammalian Gene Collection (MGC)."; RL Genome Res. 14:2121-2127(2004). RN [5] RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA] OF 109-1980. RC TISSUE=Brain; RX PubMed=9628581; DOI=10.1093/dnares/5.1.31; RA Nagase T., Ishikawa K., Miyajima N., Tanaka A., Kotani H., Nomura N., RA Ohara O.; RT "Prediction of the coding sequences of unidentified human genes. IX. The RT complete sequences of 100 new cDNA clones from brain which can code for RT large proteins in vitro."; RL DNA Res. 5:31-39(1998). RN [6] RP NUCLEOTIDE SEQUENCE [MRNA] OF 1260-1980, AND INTERACTION WITH MCM3. RX PubMed=9712829; DOI=10.1074/jbc.273.35.22177; RA Takei Y., Tsujimoto G.; RT "Identification of a novel MCM3-associated protein that facilitates MCM3 RT nuclear localization."; RL J. Biol. Chem. 273:22177-22180(1998). RN [7] RP FUNCTION (ISOFORM MCM3AP), INTERACTION WITH MCM3, AND MUTAGENESIS OF RP 1730-HIS--GLY-1733. RX PubMed=11258703; DOI=10.1093/embo-reports/kve026; RA Takei Y., Swietlik M., Tanoue A., Tsujimoto G., Kouzarides T., Laskey R.; RT "MCM3AP, a novel acetyltransferase that acetylates replication protein RT MCM3."; RL EMBO Rep. 2:119-123(2001). RN [8] RP FUNCTION (ISOFORM MCM3AP), INTERACTION WITH MCM3, SUBCELLULAR LOCATION RP (ISOFORM MCM3AP), AND MUTAGENESIS OF 1496-LEU--LEU-1501 AND RP 1730-HIS--GLY-1733. RX PubMed=12226073; DOI=10.1074/jbc.c200442200; RA Takei Y., Assenberg M., Tsujimoto G., Laskey R.; RT "The MCM3 acetylase MCM3AP inhibits initiation, but not elongation, of DNA RT replication via interaction with MCM3."; RL J. Biol. Chem. 277:43121-43125(2002). RN [9] RP INTERACTION WITH NR3C1. RX PubMed=16914116; DOI=10.1016/j.bbrc.2006.07.182; RA Osman W., Laine S., Zilliacus J.; RT "Functional interaction between the glucocorticoid receptor and RT GANP/MCM3AP."; RL Biochem. Biophys. Res. Commun. 348:1239-1244(2006). RN [10] RP PHOSPHORYLATION [LARGE SCALE ANALYSIS] AT SER-538, AND IDENTIFICATION BY RP MASS SPECTROMETRY [LARGE SCALE ANALYSIS]. RC TISSUE=Cervix carcinoma; RX PubMed=18669648; DOI=10.1073/pnas.0805139105; RA Dephoure N., Zhou C., Villen J., Beausoleil S.A., Bakalarski C.E., RA Elledge S.J., Gygi S.P.; RT "A quantitative atlas of mitotic phosphorylation."; RL Proc. Natl. Acad. Sci. U.S.A. 105:10762-10767(2008). RN [11] RP IDENTIFICATION BY MASS SPECTROMETRY [LARGE SCALE ANALYSIS]. RX PubMed=19413330; DOI=10.1021/ac9004309; RA Gauci S., Helbig A.O., Slijper M., Krijgsveld J., Heck A.J., Mohammed S.; RT "Lys-N and trypsin cover complementary parts of the phosphoproteome in a RT refined SCX-based approach."; RL Anal. Chem. 81:4493-4501(2009). RN [12] RP PHOSPHORYLATION [LARGE SCALE ANALYSIS] AT SER-538, AND IDENTIFICATION BY RP MASS SPECTROMETRY [LARGE SCALE ANALYSIS]. RC TISSUE=Leukemic T-cell; RX PubMed=19690332; DOI=10.1126/scisignal.2000007; RA Mayya V., Lundgren D.H., Hwang S.-I., Rezaul K., Wu L., Eng J.K., RA Rodionov V., Han D.K.; RT "Quantitative phosphoproteomic analysis of T cell receptor signaling RT reveals system-wide modulation of protein-protein interactions."; RL Sci. Signal. 2:RA46-RA46(2009). RN [13] RP FUNCTION (ISOFORM GANP), SUBCELLULAR LOCATION, FG-REPEATS, AND INTERACTION RP WITH NUP153; NXF1 AND RANBP2. RX PubMed=20005110; DOI=10.1016/j.cub.2009.10.078; RA Wickramasinghe V.O., McMurtrie P.I., Mills A.D., Takei Y., Penrhyn-Lowe S., RA Amagase Y., Main S., Marr J., Stewart M., Laskey R.A.; RT "mRNA export from mammalian cell nuclei is dependent on GANP."; RL Curr. Biol. 20:25-31(2010). RN [14] RP FUNCTION (ISOFORM GANP). RX PubMed=20384790; DOI=10.1111/j.1365-2443.2010.01396.x; RA Okamoto N., Kuwahara K., Ohta K., Kitabatake M., Takagi K., Mizuta H., RA Kondo E., Sakaguchi N.; RT "Germinal center-associated nuclear protein (GANP) is involved in mRNA RT export of Shugoshin-1 required for centromere cohesion and in sister- RT chromatid exchange."; RL Genes Cells 15:471-484(2010). RN [15] RP INTERACTION WITH AICDA. RX PubMed=20507984; DOI=10.1074/jbc.m110.131441; RA Maeda K., Singh S.K., Eda K., Kitabatake M., Pham P., Goodman M.F., RA Sakaguchi N.; RT "GANP-mediated recruitment of activation-induced cytidine deaminase to cell RT nuclei and to immunoglobulin variable region DNA."; RL J. Biol. Chem. 285:23945-23953(2010). RN [16] RP PHOSPHORYLATION [LARGE SCALE ANALYSIS] AT SER-538, AND IDENTIFICATION BY RP MASS SPECTROMETRY [LARGE SCALE ANALYSIS]. RC TISSUE=Cervix carcinoma; RX PubMed=20068231; DOI=10.1126/scisignal.2000475; RA Olsen J.V., Vermeulen M., Santamaria A., Kumar C., Miller M.L., RA Jensen L.J., Gnad F., Cox J., Jensen T.S., Nigg E.A., Brunak S., Mann M.; RT "Quantitative phosphoproteomics reveals widespread full phosphorylation RT site occupancy during mitosis."; RL Sci. Signal. 3:RA3-RA3(2010). RN [17] RP ALTERNATIVE PROMOTER USAGE, AND SUBCELLULAR LOCATION. RX PubMed=21195085; DOI=10.1016/j.jmb.2010.12.035; RA Wickramasinghe V.O., McMurtrie P.I., Marr J., Amagase Y., Main S., RA Mills A.D., Laskey R.A., Takei Y.; RT "MCM3AP is transcribed from a promoter within an intron of the overlapping RT gene for GANP."; RL J. Mol. Biol. 406:355-361(2011). RN [18] RP IDENTIFICATION BY MASS SPECTROMETRY [LARGE SCALE ANALYSIS]. RX PubMed=21406692; DOI=10.1126/scisignal.2001570; RA Rigbolt K.T., Prokhorova T.A., Akimov V., Henningsen J., Johansen P.T., RA Kratchmarova I., Kassem M., Mann M., Olsen J.V., Blagoev B.; RT "System-wide temporal characterization of the proteome and phosphoproteome RT of human embryonic stem cell differentiation."; RL Sci. Signal. 4:RS3-RS3(2011). RN [19] RP FUNCTION (ISOFORM GANP), IDENTIFICATION IN THE TREX-2 COMPLEX, AND RP SUBCELLULAR LOCATION. RX PubMed=23591820; DOI=10.1242/jcs.118000; RA Umlauf D., Bonnet J., Waharte F., Fournier M., Stierle M., Fischer B., RA Brino L., Devys D., Tora L.; RT "The human TREX-2 complex is stably associated with the nuclear pore RT basket."; RL J. Cell Sci. 126:2656-2667(2013). RN [20] RP PHOSPHORYLATION [LARGE SCALE ANALYSIS] AT SER-430; SER-538 AND SER-557, AND RP IDENTIFICATION BY MASS SPECTROMETRY [LARGE SCALE ANALYSIS]. RC TISSUE=Cervix carcinoma, and Erythroleukemia; RX PubMed=23186163; DOI=10.1021/pr300630k; RA Zhou H., Di Palma S., Preisinger C., Peng M., Polat A.N., Heck A.J., RA Mohammed S.; RT "Toward a comprehensive characterization of a human cancer cell RT phosphoproteome."; RL J. Proteome Res. 12:260-271(2013). RN [21] RP FUNCTION, INTERACTION WITH DDX21; DDX39A; DHX9; NUP62; NUP153; POLR2A; RP SUPT5H AND TOP2A, SUBCELLULAR LOCATION, AND CATALYTIC ACTIVITY. RX PubMed=23652018; DOI=10.1038/ncomms2823; RA Singh S.K., Maeda K., Eid M.M., Almofty S.A., Ono M., Pham P., RA Goodman M.F., Sakaguchi N.; RT "GANP regulates recruitment of AID to immunoglobulin variable regions by RT modulating transcription and nucleosome occupancy."; RL Nat. Commun. 4:1830-1830(2013). RN [22] RP X-RAY CRYSTALLOGRAPHY (2.1 ANGSTROMS) OF 1163-1235 IN COMPLEX WITH ENY2, RP FUNCTION (ISOFORM GANP), IDENTIFICATION IN THE TREX-2 COMPLEX, AND RP SUBCELLULAR LOCATION. RX PubMed=22307388; DOI=10.1093/nar/gks059; RA Jani D., Lutz S., Hurt E., Laskey R.A., Stewart M., Wickramasinghe V.O.; RT "Functional and structural characterization of the mammalian TREX-2 complex RT that links transcription with nuclear messenger RNA export."; RL Nucleic Acids Res. 40:4562-4573(2012). RN [23] RP VARIANTS [LARGE SCALE ANALYSIS] VAL-409 AND ILE-1576. RX PubMed=16959974; DOI=10.1126/science.1133427; RA Sjoeblom T., Jones S., Wood L.D., Parsons D.W., Lin J., Barber T.D., RA Mandelker D., Leary R.J., Ptak J., Silliman N., Szabo S., Buckhaults P., RA Farrell C., Meeh P., Markowitz S.D., Willis J., Dawson D., Willson J.K.V., RA Gazdar A.F., Hartigan J., Wu L., Liu C., Parmigiani G., Park B.H., RA Bachman K.E., Papadopoulos N., Vogelstein B., Kinzler K.W., RA Velculescu V.E.; RT "The consensus coding sequences of human breast and colorectal cancers."; RL Science 314:268-274(2006). RN [24] RP INVOLVEMENT IN PNRIID, AND VARIANT PNRIID LYS-915. RX PubMed=24123876; DOI=10.1136/jmedgenet-2013-101644; RA Schuurs-Hoeijmakers J.H., Vulto-van Silfhout A.T., Vissers L.E., RA van de Vondervoort I.I., van Bon B.W., de Ligt J., Gilissen C., RA Hehir-Kwa J.Y., Neveling K., del Rosario M., Hira G., Reitano S., RA Vitello A., Failla P., Greco D., Fichera M., Galesi O., Kleefstra T., RA Greally M.T., Ockeloen C.W., Willemsen M.H., Bongers E.M., Janssen I.M., RA Pfundt R., Veltman J.A., Romano C., Willemsen M.A., van Bokhoven H., RA Brunner H.G., de Vries B.B., de Brouwer A.P.; RT "Identification of pathogenic gene variants in small families with RT intellectually disabled siblings by exome sequencing."; RL J. Med. Genet. 50:802-811(2013). RN [25] RP INVOLVEMENT IN PNRIID, VARIANTS PNRIID THR-762; ASP-867; 889-TYR--ILE-1980 RP DEL; MET-1272; 1478-SER--ILE-1980 DEL AND LYS-1577, AND SUBCELLULAR RP LOCATION. RX PubMed=28633435; DOI=10.1093/brain/awx138; RA Ylikallio E., Woldegebriel R., Tumiati M., Isohanni P., Ryan M.M., RA Stark Z., Walsh M., Sawyer S.L., Bell K.M., Oshlack A., Lockhart P.J., RA Shcherbii M., Estrada-Cuzcano A., Atkinson D., Hartley T., Tetreault M., RA Cuppen I., van der Pol W.L., Candayan A., Battaloglu E., Parman Y., RA van Gassen K.L.I., van den Boogaard M.H., Boycott K.M., Kauppi L., RA Jordanova A., Loennqvist T., Tyynismaa H.; RT "MCM3AP in recessive Charcot-Marie-Tooth neuropathy and mild intellectual RT disability."; RL Brain 140:2093-2103(2017). RN [26] RP INVOLVEMENT IN PNRIID, AND VARIANTS PNRIID HIS-878; PRO-951 AND RP 1804-GLN--ILE-1980 DEL. RX PubMed=28969388; DOI=10.1093/brain/awx222; RA Karakaya M., Mazaheri N., Polat I., Bharucha-Goebel D., Donkervoort S., RA Maroofian R., Shariati G., Hoelker I., Monaghan K., Winchester S., Zori R., RA Galehdari H., Boennemann C.G., Yis U., Wirth B.; RT "Biallelic MCM3AP mutations cause Charcot-Marie-Tooth neuropathy with RT variable clinical presentation."; RL Brain 140:E65-E65(2017). RN [27] RP INVOLVEMENT IN PNRIID, AND VARIANT PNRIID SER-870. RX PubMed=29982295; DOI=10.1093/brain/awy184; RA Kennerson M.L., Corbett A.C., Ellis M., Perez-Siles G., Nicholson G.A.; RT "A novel MCM3AP mutation in a Lebanese family with recessive Charcot-Marie- RT Tooth neuropathy."; RL Brain 141:E66-E66(2018). CC -!- FUNCTION: [Isoform GANP]: As a component of the TREX-2 complex, CC involved in the export of mRNAs to the cytoplasm through the nuclear CC pores (PubMed:20005110, PubMed:20384790, PubMed:23591820, CC PubMed:22307388). Through the acetylation of histones, affects the CC assembly of nucleosomes at immunoglobulin variable region genes and CC promotes the recruitment and positioning of transcription complex to CC favor DNA cytosine deaminase AICDA/AID targeting, hence promoting CC somatic hypermutations (PubMed:23652018). {ECO:0000269|PubMed:20005110, CC ECO:0000269|PubMed:20384790, ECO:0000269|PubMed:22307388, CC ECO:0000269|PubMed:23591820, ECO:0000269|PubMed:23652018}. CC -!- FUNCTION: [Isoform MCM3AP]: Binds to and acetylates the replication CC protein MCM3. Plays a role in the initiation of DNA replication and CC participates in controls that ensure that DNA replication initiates CC only once per cell cycle (PubMed:11258703, PubMed:12226073). Through CC the acetylation of histones, affects the assembly of nucleosomes at CC immunoglobulin variable region genes and promotes the recruitment and CC positioning of transcription complex to favor DNA cytosine deaminase CC AICDA/AID targeting, hence promoting somatic hypermutations CC (PubMed:23652018). {ECO:0000269|PubMed:11258703, CC ECO:0000269|PubMed:12226073, ECO:0000269|PubMed:23652018}. CC -!- CATALYTIC ACTIVITY: CC Reaction=acetyl-CoA + L-lysyl-[histone] = CoA + H(+) + N(6)-acetyl-L- CC lysyl-[histone]; Xref=Rhea:RHEA:21992, Rhea:RHEA-COMP:9845, CC Rhea:RHEA-COMP:11338, ChEBI:CHEBI:15378, ChEBI:CHEBI:29969, CC ChEBI:CHEBI:57287, ChEBI:CHEBI:57288, ChEBI:CHEBI:61930; EC=2.3.1.48; CC Evidence={ECO:0000269|PubMed:23652018}; CC PhysiologicalDirection=left-to-right; Xref=Rhea:RHEA:21993; CC Evidence={ECO:0000269|PubMed:23652018}; CC -!- SUBUNIT: Isoform GANP: Component of the nuclear pore complex (NPC)- CC associated TREX-2 complex (transcription and export complex 2), CC composed of at least GANP, 2 copies of ENY2, PCID2, SEM1/DSS1, and CC either centrin CETN2 or centrin CETN3. The TREX-2 complex also CC associates with ALYREF/ALY (PubMed:23591820, PubMed:22307388). CC Interacts with RNA polymerase II subunit POLR2A and with the CC transcription elongation factor SUPT5H/SPT5 (PubMed:23652018, CC PubMed:22307388). Interacts (via FG-repeats) with NXF1; this CC interaction is not mediated by RNA (PubMed:20005110). Isoform GANP CC interacts with nuclear envelope proteins NUP62, NUP153 and CC RANBP2/NUP358; interaction with NUP153 is required for full CC localization at the nuclear pore complex (PubMed:20005110, CC PubMed:23652018). Interacts with several RNA helicases, including DHX9, CC DDX21, and DDX39A/DDX39, and with DNA topoisomerase TOP2A CC (PubMed:23652018). Directly interacts with AICDA/AID (PubMed:20507984). CC Interacts with the glucocorticoid receptor NR3C1 (PubMed:16914116). CC Isoform MCM3AP: Interacts with the glucocorticoid receptor NR3C1 CC (PubMed:16914116). Interacts with MCM3; this interaction leads to MCM3 CC acetylation (PubMed:9712829, PubMed:11258703, PubMed:12226073). CC {ECO:0000269|PubMed:11258703, ECO:0000269|PubMed:12226073, CC ECO:0000269|PubMed:16914116, ECO:0000269|PubMed:20005110, CC ECO:0000269|PubMed:20507984, ECO:0000269|PubMed:22307388, CC ECO:0000269|PubMed:23591820, ECO:0000269|PubMed:23652018, CC ECO:0000269|PubMed:9712829}. CC -!- SUBCELLULAR LOCATION: [Isoform GANP]: Nucleus envelope CC {ECO:0000269|PubMed:20005110, ECO:0000269|PubMed:21195085, CC ECO:0000269|PubMed:22307388, ECO:0000269|PubMed:23591820, CC ECO:0000269|PubMed:28633435}. Nucleus, nuclear pore complex CC {ECO:0000269|PubMed:22307388, ECO:0000269|PubMed:23591820}. Nucleus, CC nucleoplasm {ECO:0000269|PubMed:20005110}. Chromosome CC {ECO:0000269|PubMed:23652018}. Note=Predominantly located at the CC nuclear envelope, facing the nucleus interior (PubMed:20005110, CC PubMed:21195085, PubMed:23591820). Localization at the nuclear pore CC complex requires NUP153, TPR and ALYREF/ALY (PubMed:23591820, CC PubMed:22307388). Also found associated with chromatin CC (PubMed:23652018). In B-cells, targeted to the immunoglobulin variable CC region genes (PubMed:23652018). {ECO:0000269|PubMed:20005110, CC ECO:0000269|PubMed:21195085, ECO:0000269|PubMed:22307388, CC ECO:0000269|PubMed:23591820, ECO:0000269|PubMed:23652018}. CC -!- SUBCELLULAR LOCATION: [Isoform MCM3AP]: Cytoplasm CC {ECO:0000269|PubMed:12226073, ECO:0000269|PubMed:21195085}. Nucleus CC {ECO:0000269|PubMed:12226073, ECO:0000269|PubMed:21195085}. CC Note=Translocates into the nucleus in the presence of MCM3 CC (PubMed:12226073). Associates with chromatin possibly through CC interaction with MCM3 (PubMed:12226073). {ECO:0000269|PubMed:12226073}. CC -!- ALTERNATIVE PRODUCTS: CC Event=Alternative promoter usage; Named isoforms=2; CC Name=GANP; CC IsoId=O60318-1; Sequence=Displayed; CC Name=MCM3AP; Synonyms=80 kDa MCM3-associated protein; CC IsoId=O60318-2; Sequence=VSP_053438; CC -!- TISSUE SPECIFICITY: Widely expressed (PubMed:11024281). Up-regulated in CC germinal center B-cells in tonsils (at protein level) CC (PubMed:11024281). {ECO:0000269|PubMed:11024281}. CC -!- DISEASE: Peripheral neuropathy, autosomal recessive, with or without CC impaired intellectual development (PNRIID) [MIM:618124]: An autosomal CC recessive disorder characterized by early childhood-onset of peripheral CC sensorimotor neuropathy, progressive distal muscle weakness, atrophy in CC hands and feet, and gait difficulties, often with loss of ambulation. CC Most affected individuals also have impaired intellectual development, CC although some have normal cognition. Additional features may include CC eye movement abnormalities, claw hands, foot deformities, and CC scoliosis. {ECO:0000269|PubMed:24123876, ECO:0000269|PubMed:28633435, CC ECO:0000269|PubMed:28969388, ECO:0000269|PubMed:29982295}. Note=The CC disease is caused by variants affecting distinct genetic loci, CC including the gene represented in this entry. CC -!- MISCELLANEOUS: [Isoform MCM3AP]: Produced via an alternative promoter CC within an intron of GANP. MCM3AP promoter elements are poorly conserved CC in mice, suggesting that the regulation of MCM3AP may be human CC specific. {ECO:0000269|PubMed:21195085}. CC -!- SIMILARITY: Belongs to the SAC3 family. {ECO:0000305}. CC -!- WEB RESOURCE: Name=NIEHS-SNPs; CC URL="http://egp.gs.washington.edu/data/mcm3ap/"; CC --------------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see https://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution (CC BY 4.0) License CC --------------------------------------------------------------------------- DR EMBL; AJ010089; CAB52687.1; -; mRNA. DR EMBL; AY590469; AAS89300.1; -; Genomic_DNA. DR EMBL; AP000471; -; NOT_ANNOTATED_CDS; Genomic_DNA. DR EMBL; AP001469; -; NOT_ANNOTATED_CDS; Genomic_DNA. DR EMBL; BC013285; AAH13285.2; -; mRNA. DR EMBL; BC004497; AAH04497.2; -; mRNA. DR EMBL; BC104958; AAI04959.1; -; mRNA. DR EMBL; BC104960; AAI04961.1; -; mRNA. DR EMBL; AB011144; BAA25498.1; -; mRNA. DR EMBL; AB005543; BAA25170.1; -; mRNA. DR CCDS; CCDS13734.1; -. [O60318-1] DR PIR; T00339; T00339. DR RefSeq; NP_003897.2; NM_003906.4. [O60318-1] DR RefSeq; XP_005261260.1; XM_005261203.4. [O60318-1] DR RefSeq; XP_005261261.1; XM_005261204.4. [O60318-1] DR RefSeq; XP_005261262.1; XM_005261205.3. [O60318-1] DR PDB; 4DHX; X-ray; 2.10 A; A/D=1163-1235. DR PDBsum; 4DHX; -. DR AlphaFoldDB; O60318; -. DR SMR; O60318; -. DR BioGRID; 114406; 140. DR ComplexPortal; CPX-2477; TREX-2 transcription-export complex, CETN2 variant. DR ComplexPortal; CPX-7281; TREX-2 transcription-export complex, CETN3 variant. DR DIP; DIP-31696N; -. DR IntAct; O60318; 47. DR MINT; O60318; -. DR STRING; 9606.ENSP00000291688; -. DR TCDB; 1.I.1.1.3; the nuclear pore complex (npc) family. DR GlyCosmos; O60318; 12 sites, 2 glycans. DR GlyGen; O60318; 14 sites, 2 O-linked glycans (14 sites). DR iPTMnet; O60318; -. DR PhosphoSitePlus; O60318; -. DR SwissPalm; O60318; -. DR BioMuta; MCM3AP; -. DR EPD; O60318; -. DR jPOST; O60318; -. DR MassIVE; O60318; -. DR MaxQB; O60318; -. DR PaxDb; 9606-ENSP00000380820; -. DR PeptideAtlas; O60318; -. DR ProteomicsDB; 10659; -. DR ProteomicsDB; 49343; -. [O60318-1] DR Pumba; O60318; -. DR Antibodypedia; 10636; 274 antibodies from 33 providers. DR DNASU; 8888; -. DR Ensembl; ENST00000291688.6; ENSP00000291688.1; ENSG00000160294.11. [O60318-1] DR Ensembl; ENST00000397708.1; ENSP00000380820.1; ENSG00000160294.11. [O60318-1] DR GeneID; 8888; -. DR KEGG; hsa:8888; -. DR MANE-Select; ENST00000291688.6; ENSP00000291688.1; NM_003906.5; NP_003897.2. DR UCSC; uc002zir.3; human. [O60318-1] DR AGR; HGNC:6946; -. DR CTD; 8888; -. DR DisGeNET; 8888; -. DR GeneCards; MCM3AP; -. DR GeneReviews; MCM3AP; -. DR HGNC; HGNC:6946; MCM3AP. DR HPA; ENSG00000160294; Low tissue specificity. DR MalaCards; MCM3AP; -. DR MIM; 603294; gene. DR MIM; 618124; phenotype. DR neXtProt; NX_O60318; -. DR OpenTargets; ENSG00000160294; -. DR PharmGKB; PA30692; -. DR VEuPathDB; HostDB:ENSG00000160294; -. DR eggNOG; KOG1860; Eukaryota. DR GeneTree; ENSGT00940000156322; -. DR HOGENOM; CLU_001842_1_0_1; -. DR InParanoid; O60318; -. DR OMA; DMTIFWH; -. DR OrthoDB; 91913at2759; -. DR PhylomeDB; O60318; -. DR TreeFam; TF105948; -. DR PathwayCommons; O60318; -. DR SignaLink; O60318; -. DR SIGNOR; O60318; -. DR BioGRID-ORCS; 8888; 808 hits in 1169 CRISPR screens. DR ChiTaRS; MCM3AP; human. DR GeneWiki; MCM3AP; -. DR GenomeRNAi; 8888; -. DR Pharos; O60318; Tbio. DR PRO; PR:O60318; -. DR Proteomes; UP000005640; Chromosome 21. DR RNAct; O60318; Protein. DR Bgee; ENSG00000160294; Expressed in tendon of biceps brachii and 202 other cell types or tissues. DR ExpressionAtlas; O60318; baseline and differential. DR GO; GO:0005694; C:chromosome; IEA:UniProtKB-SubCell. DR GO; GO:0005737; C:cytoplasm; IBA:GO_Central. DR GO; GO:0005829; C:cytosol; IDA:HPA. DR GO; GO:0031965; C:nuclear membrane; IDA:HPA. DR GO; GO:0044615; C:nuclear pore nuclear basket; IDA:UniProtKB. DR GO; GO:0005654; C:nucleoplasm; IDA:HPA. DR GO; GO:0005634; C:nucleus; HDA:UniProtKB. DR GO; GO:0070390; C:transcription export complex 2; IDA:UniProtKB. DR GO; GO:0003682; F:chromatin binding; IDA:UniProtKB. DR GO; GO:0004402; F:histone acetyltransferase activity; IDA:UniProtKB. DR GO; GO:0042393; F:histone binding; IDA:UniProtKB. DR GO; GO:0010484; F:histone H3 acetyltransferase activity; IDA:UniProtKB. DR GO; GO:0003676; F:nucleic acid binding; IEA:InterPro. DR GO; GO:0006406; P:mRNA export from nucleus; IBA:GO_Central. DR GO; GO:0034728; P:nucleosome organization; IDA:UniProtKB. DR GO; GO:0016973; P:poly(A)+ mRNA export from nucleus; IMP:UniProtKB. DR GO; GO:0015031; P:protein transport; IEA:UniProtKB-KW. DR GO; GO:0016446; P:somatic hypermutation of immunoglobulin genes; IDA:UniProtKB. DR CDD; cd12443; RRM_MCM3A_like; 1. DR Gene3D; 1.25.40.990; -; 1. DR Gene3D; 6.10.250.1340; -; 1. DR InterPro; IPR031910; GANP_CID_dom. DR InterPro; IPR031907; MCM3AP_GANP. DR InterPro; IPR034265; MCM3AP_RRM. DR InterPro; IPR031908; NupH_GANP. DR InterPro; IPR000717; PCI_dom. DR InterPro; IPR035979; RBD_domain_sf. DR InterPro; IPR045107; SAC3/GANP/THP3. DR InterPro; IPR005062; SAC3/GANP/THP3_conserved. DR PANTHER; PTHR12436; 80 KDA MCM3-ASSOCIATED PROTEIN; 1. DR PANTHER; PTHR12436:SF3; GERMINAL-CENTER ASSOCIATED NUCLEAR PROTEIN; 1. DR Pfam; PF16766; CID_GANP; 1. DR Pfam; PF16769; MCM3AP_GANP; 1. DR Pfam; PF16768; NupH_GANP; 1. DR Pfam; PF03399; SAC3_GANP; 1. DR SUPFAM; SSF54928; RNA-binding domain, RBD; 1. DR PROSITE; PS50250; PCI; 1. DR Genevisible; O60318; HS. PE 1: Evidence at protein level; KW 3D-structure; Acetylation; Acyltransferase; Alternative promoter usage; KW Chromosome; Coiled coil; Cytoplasm; Immunity; Intellectual disability; KW Methylation; mRNA transport; Neuropathy; Nuclear pore complex; Nucleus; KW Phosphoprotein; Protein transport; Reference proteome; Transferase; KW Translocation; Transport. FT CHAIN 1..1980 FT /note="Germinal-center associated nuclear protein" FT /id="PRO_0000096284" FT DOMAIN 775..958 FT /note="PCI" FT /evidence="ECO:0000255|PROSITE-ProRule:PRU01185" FT REGION 1..67 FT /note="Disordered" FT /evidence="ECO:0000256|SAM:MobiDB-lite" FT REGION 33..340 FT /note="FG-repeats" FT REGION 212..247 FT /note="Disordered" FT /evidence="ECO:0000256|SAM:MobiDB-lite" FT REGION 266..432 FT /note="Disordered" FT /evidence="ECO:0000256|SAM:MobiDB-lite" FT REGION 511..557 FT /note="Disordered" FT /evidence="ECO:0000256|SAM:MobiDB-lite" FT REGION 686..1003 FT /note="Interaction with PCID2 and SEM1" FT /evidence="ECO:0000269|PubMed:22307388" FT REGION 998..1038 FT /note="Disordered" FT /evidence="ECO:0000256|SAM:MobiDB-lite" FT REGION 1162..1256 FT /note="CID" FT REGION 1162..1200 FT /note="Interaction with ENY2" FT /evidence="ECO:0000269|PubMed:22307388" FT REGION 1207..1235 FT /note="Interaction with ENY2" FT /evidence="ECO:0000269|PubMed:22307388" FT REGION 1236..1256 FT /note="Interaction with Centrin" FT /evidence="ECO:0000269|PubMed:22307388" FT REGION 1658..1790 FT /note="Acetyltransferase" FT COILED 1133..1170 FT /evidence="ECO:0000255" FT COMPBIAS 1..26 FT /note="Polar residues" FT /evidence="ECO:0000256|SAM:MobiDB-lite" FT COMPBIAS 36..67 FT /note="Polar residues" FT /evidence="ECO:0000256|SAM:MobiDB-lite" FT COMPBIAS 212..230 FT /note="Polar residues" FT /evidence="ECO:0000256|SAM:MobiDB-lite" FT COMPBIAS 288..330 FT /note="Basic and acidic residues" FT /evidence="ECO:0000256|SAM:MobiDB-lite" FT COMPBIAS 351..369 FT /note="Basic and acidic residues" FT /evidence="ECO:0000256|SAM:MobiDB-lite" FT COMPBIAS 393..412 FT /note="Basic and acidic residues" FT /evidence="ECO:0000256|SAM:MobiDB-lite" FT COMPBIAS 413..432 FT /note="Polar residues" FT /evidence="ECO:0000256|SAM:MobiDB-lite" FT COMPBIAS 511..526 FT /note="Basic and acidic residues" FT /evidence="ECO:0000256|SAM:MobiDB-lite" FT MOD_RES 32 FT /note="Asymmetric dimethylarginine" FT /evidence="ECO:0000250|UniProtKB:Q9WUU9" FT MOD_RES 430 FT /note="Phosphoserine" FT /evidence="ECO:0007744|PubMed:23186163" FT MOD_RES 489 FT /note="N6-acetyllysine" FT /evidence="ECO:0000250|UniProtKB:Q9WUU9" FT MOD_RES 490 FT /note="N6-acetyllysine" FT /evidence="ECO:0000250|UniProtKB:Q9WUU9" FT MOD_RES 508 FT /note="Phosphoserine" FT /evidence="ECO:0000250|UniProtKB:Q9WUU9" FT MOD_RES 538 FT /note="Phosphoserine" FT /evidence="ECO:0007744|PubMed:18669648, FT ECO:0007744|PubMed:19690332, ECO:0007744|PubMed:20068231, FT ECO:0007744|PubMed:23186163" FT MOD_RES 557 FT /note="Phosphoserine" FT /evidence="ECO:0007744|PubMed:23186163" FT VAR_SEQ 1..1259 FT /note="Missing (in isoform MCM3AP)" FT /evidence="ECO:0000305" FT /id="VSP_053438" FT VARIANT 102 FT /note="S -> L (in dbSNP:rs9975588)" FT /evidence="ECO:0000269|PubMed:15489334, ECO:0000269|Ref.2" FT /id="VAR_019240" FT VARIANT 288 FT /note="M -> V (in dbSNP:rs17182545)" FT /evidence="ECO:0000269|Ref.2" FT /id="VAR_019241" FT VARIANT 333 FT /note="R -> L (in dbSNP:rs17182552)" FT /evidence="ECO:0000269|Ref.2" FT /id="VAR_019242" FT VARIANT 409 FT /note="L -> V (in a colorectal cancer sample; somatic FT mutation; dbSNP:rs773228537)" FT /evidence="ECO:0000269|PubMed:16959974" FT /id="VAR_035472" FT VARIANT 413 FT /note="P -> L (in dbSNP:rs17182566)" FT /evidence="ECO:0000269|Ref.2" FT /id="VAR_019243" FT VARIANT 762 FT /note="M -> T (in PNRIID; uncertain significance)" FT /evidence="ECO:0000269|PubMed:28633435" FT /id="VAR_081543" FT VARIANT 867 FT /note="A -> D (in PNRIID; uncertain significance)" FT /evidence="ECO:0000269|PubMed:28633435" FT /id="VAR_081544" FT VARIANT 870 FT /note="L -> S (in PNRIID; uncertain significance)" FT /evidence="ECO:0000269|PubMed:29982295" FT /id="VAR_081545" FT VARIANT 878 FT /note="R -> H (in PNRIID; uncertain significance; FT dbSNP:rs373674344)" FT /evidence="ECO:0000269|PubMed:28969388" FT /id="VAR_081546" FT VARIANT 889..1980 FT /note="Missing (in PNRIID)" FT /evidence="ECO:0000269|PubMed:28633435" FT /id="VAR_081547" FT VARIANT 915 FT /note="E -> K (in PNRIID; uncertain significance; FT dbSNP:rs483352869)" FT /evidence="ECO:0000269|PubMed:24123876" FT /id="VAR_070560" FT VARIANT 951 FT /note="S -> P (in PNRIID; uncertain significance)" FT /evidence="ECO:0000269|PubMed:28969388" FT /id="VAR_081548" FT VARIANT 1051 FT /note="P -> L (in dbSNP:rs17182850)" FT /evidence="ECO:0000269|Ref.2" FT /id="VAR_019244" FT VARIANT 1062 FT /note="V -> M (in dbSNP:rs17182857)" FT /evidence="ECO:0000269|Ref.2" FT /id="VAR_019245" FT VARIANT 1272 FT /note="V -> M (in PNRIID; uncertain significance; FT dbSNP:rs779248881)" FT /evidence="ECO:0000269|PubMed:28633435" FT /id="VAR_081549" FT VARIANT 1314 FT /note="R -> W (in dbSNP:rs17176709)" FT /evidence="ECO:0000269|Ref.2" FT /id="VAR_019246" FT VARIANT 1449 FT /note="D -> E (in dbSNP:rs17183220)" FT /evidence="ECO:0000269|Ref.2" FT /id="VAR_019247" FT VARIANT 1478..1980 FT /note="Missing (in PNRIID; uncertain significance)" FT /evidence="ECO:0000269|PubMed:28633435" FT /id="VAR_081550" FT VARIANT 1576 FT /note="V -> I (in dbSNP:rs17183248)" FT /evidence="ECO:0000269|PubMed:16959974, ECO:0000269|Ref.2" FT /id="VAR_019248" FT VARIANT 1577 FT /note="E -> K (in PNRIID; uncertain significance; FT dbSNP:rs779630101)" FT /evidence="ECO:0000269|PubMed:28633435" FT /id="VAR_081551" FT VARIANT 1795 FT /note="A -> T (in dbSNP:rs17183290)" FT /evidence="ECO:0000269|Ref.2" FT /id="VAR_019249" FT VARIANT 1804..1980 FT /note="Missing (in PNRIID; uncertain significance)" FT /evidence="ECO:0000269|PubMed:28969388" FT /id="VAR_081552" FT VARIANT 1831 FT /note="R -> C (in dbSNP:rs2298697)" FT /id="VAR_053973" FT VARIANT 1870 FT /note="L -> R (in dbSNP:rs17176933)" FT /evidence="ECO:0000269|Ref.2" FT /id="VAR_019250" FT VARIANT 1941 FT /note="A -> V (in dbSNP:rs17183403)" FT /evidence="ECO:0000269|Ref.2" FT /id="VAR_019251" FT MUTAGEN 1496..1501 FT /note="LPLVVL->APLAAA: Loss of i nteraction with MCM3, loss FT of nuclear localization, loss of chromatin-binding." FT /evidence="ECO:0000269|PubMed:12226073" FT MUTAGEN 1730..1733 FT /note="HGAG->AAAA: Severely decreased acetylase activity, FT loss of DNA replication inhibition. Does not affect FT chromatin-binding." FT /evidence="ECO:0000269|PubMed:11258703, FT ECO:0000269|PubMed:12226073" FT HELIX 1168..1232 FT /evidence="ECO:0007829|PDB:4DHX" SQ SEQUENCE 1980 AA; 218405 MW; 503D192686FC38A8 CRC64; MNPTNPFSGQ QPSAFSASSS NVGTLPSKPP FRFGQPSLFG QNSTLSGKSS GFSQVSSFPA SSGVSHSSSV QTLGFTQTSS VGPFSGLEHT STFVATSGPS SSSVLGNTGF SFKSPTSVGA FPSTSAFGQE AGEIVNSGFG KTEFSFKPLE NAVFKPILGA ESEPEKTQSQ IASGFFTFSH PISSAPGGLA PFSFPQVTSS SATTSNFTFS KPVSSNNSLS AFTPALSNQN VEEEKRGPKS IFGSSNNSFS SFPVSSAVLG EPFQASKAGV RQGCEEAVSQ VEPLPSLMKG LKRKEDQDRS PRRHGHEPAE DSDPLSRGDH PPDKRPVRLN RPRGGTLFGR TIQDVFKSNK EVGRLGNKEA KKETGFVESA ESDHMAIPGG NQSVLAPSRI PGVNKEEETE SREKKEDSLR GTPARQSNRS ESTDSLGGLS PSEVTAIQCK NIPDYLNDRT ILENHFGKIA KVQRIFTRRS KKLAVVHFFD HASAALARKK GKSLHKDMAI FWHRKKISPN KKPFSLKEKK PGDGEVSPST EDAPFQHSPL GKAAGRTGAS SLLNKSSPVK KPSLLKAHQF EGDSFDSASE GSEGLGPCVL SLSTLIGTVA ETSKEKYRLL DQRDRIMRQA RVKRTDLDKA RTFVGTCLDM CPEKERYMRE TRSQLSVFEV VPGTDQVDHA AAVKEYSRSS ADQEEPLPHE LRPLPVLSRT MDYLVTQIMD QKEGSLRDWY DFVWNRTRGI RKDITQQHLC DPLTVSLIEK CTRFHIHCAH FMCEEPMSSF DAKINNENMT KCLQSLKEMY QDLRNKGVFC ASEAEFQGYN VLLSLNKGDI LREVQQFHPA VRNSSEVKFA VQAFAALNSN NFVRFFKLVQ SASYLNACLL HCYFSQIRKD ALRALNFAYT VSTQRSTIFP LDGVVRMLLF RDCEEATDFL TCHGLTVSDG CVELNRSAFL EPEGLSKTRK SVFITRKLTV SVGEIVNGGP LPPVPRHTPV CSFNSQNKYI GESLAAELPV STQRPGSDTV GGGRGEECGV EPDAPLSSLP QSLPAPAPSP VPLPPVLALT PSVAPSLFQL SVQPEPPPPE PVPMYSDEDL AQVVDELIQE ALQRDCEEVG SAGAAYAAAA LGVSNAAMED LLTAATTGIL RHIAAEEVSK ERERREQERQ RAEEERLKQE RELVLSELSQ GLAVELMERV MMEFVRETCS QELKNAVETD QRVRVARCCE DVCAHLVDLF LVEEIFQTAK ETLQELQCFC KYLQRWREAV TARKKLRRQM RAFPAAPCCV DVSDRLRALA PSAECPIAEE NLARGLLDLG HAGRLGISCT RLRRLRNKTA HQMKVQHFYQ QLLSDVAWAS LDLPSLVAEH LPGRQEHVFW KLVLVLPDVE EQSPESCGRI LANWLKVKFM GDEGSVDDTS SDAGGIQTLS LFNSLSSKGD QMISVNVCIK VAHGALSDGA IDAVETQKDL LGASGLMLLL PPKMKSEDMA EEDVYWLSAL LQLKQLLQAK PFQPALPLVV LVPSPGGDAV EKEVEDGLML QDLVSAKLIS DYTVTEIPDT INDLQGSTKV LQAVQWLVSH CPHSLDLCCQ TLIQYVEDGI GHEFSGRFFH DRRERRLGGL ASQEPGAIIE LFNSVLQFLA SVVSSEQLCD LSWPVTEFAE AGGSRLLPHL HWNAPEHLAW LKQAVLGFQL PQMDLPPLGA PWLPVCSMVV QYASQIPSSR QTQPVLQSQV ENLLHRTYCR WKSKSPSPVH GAGPSVMEIP WDDLIALCIN HKLRDWTPPR LPVTSEALSE DGQICVYFFK NDLKKYDVPL SWEQARLQTQ KELQLREGRL AIKPFHPSAN NFPIPLLHMH RNWKRSTECA QEGRIPSTED LMRGASAEEL LAQCLSSSLL LEKEENKRFE DQLQQWLSED SGAFTDLTSL PLYLPQTLVS LSHTIEPVMK TSVTTSPQSD MMREQLQLSE ATGTCLGERL KHLERLIRSS REEEVASELH LSALLDMVDI //