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Protein

Uncharacterized ATP-dependent helicase C23E6.02

Gene

SPBC23E6.02

Organism
Schizosaccharomyces pombe (strain 972 / ATCC 24843) (Fission yeast)
Status
Reviewed-Annotation score: -Protein inferred from homologyi

Functioni

Regions

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Nucleotide bindingi416 – 423ATPPROSITE-ProRule annotation8
Zinc fingeri746 – 798RING-typePROSITE-ProRule annotationAdd BLAST53

GO - Molecular functioni

GO - Biological processi

  • DNA protection Source: PomBase
  • DNA repair Source: PomBase
  • double-strand break repair via homologous recombination Source: PomBase
  • mitotic DNA replication maintenance of fidelity Source: PomBase
  • negative regulation of proteasomal ubiquitin-dependent protein catabolic process Source: PomBase

Keywordsi

Molecular functionHelicase, Hydrolase
LigandATP-binding, Metal-binding, Nucleotide-binding, Zinc

Names & Taxonomyi

Protein namesi
Recommended name:
Uncharacterized ATP-dependent helicase C23E6.02 (EC:3.6.4.-)
Gene namesi
ORF Names:SPBC23E6.02
OrganismiSchizosaccharomyces pombe (strain 972 / ATCC 24843) (Fission yeast)
Taxonomic identifieri284812 [NCBI]
Taxonomic lineageiEukaryotaFungiDikaryaAscomycotaTaphrinomycotinaSchizosaccharomycetesSchizosaccharomycetalesSchizosaccharomycetaceaeSchizosaccharomyces
Proteomesi
  • UP000002485 Componenti: Chromosome II

Organism-specific databases

EuPathDBiFungiDB:SPBC23E6.02
PomBaseiSPBC23E6.02

Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cell wall Cytoskeleton Vacuole Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertionGraphics by Christian Stolte; Source: COMPARTMENTS

Keywords - Cellular componenti

Nucleus

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_00003107871 – 1040Uncharacterized ATP-dependent helicase C23E6.02Add BLAST1040

Proteomic databases

MaxQBiO60177
PaxDbiO60177
PRIDEiO60177

PTM databases

iPTMnetiO60177

Interactioni

Protein-protein interaction databases

BioGridi27699227 interactors.
STRINGi4896.SPBC23E6.02.1

Structurei

3D structure databases

ProteinModelPortaliO60177
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini403 – 588Helicase ATP-bindingPROSITE-ProRule annotationAdd BLAST186
Domaini866 – 1032Helicase C-terminalPROSITE-ProRule annotationAdd BLAST167

Sequence similaritiesi

Belongs to the SNF2/RAD54 helicase family.Curated

Zinc finger

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Zinc fingeri746 – 798RING-typePROSITE-ProRule annotationAdd BLAST53

Keywords - Domaini

Zinc-finger

Phylogenomic databases

InParanoidiO60177
OMAiRENYANI
OrthoDBiEOG092C0TGB
PhylomeDBiO60177

Family and domain databases

CDDicd00079 HELICc, 1 hit
Gene3Di3.30.40.101 hit
3.40.50.108101 hit
InterProiView protein in InterPro
IPR014001 Helicase_ATP-bd
IPR001650 Helicase_C
IPR027417 P-loop_NTPase
IPR038718 SNF2-like_sf
IPR000330 SNF2_N
IPR018957 Znf_C3HC4_RING-type
IPR001841 Znf_RING
IPR013083 Znf_RING/FYVE/PHD
IPR017907 Znf_RING_CS
PfamiView protein in Pfam
PF00271 Helicase_C, 1 hit
PF00176 SNF2_N, 1 hit
PF00097 zf-C3HC4, 1 hit
SMARTiView protein in SMART
SM00487 DEXDc, 1 hit
SM00490 HELICc, 1 hit
SM00184 RING, 1 hit
SUPFAMiSSF52540 SSF52540, 3 hits
PROSITEiView protein in PROSITE
PS51192 HELICASE_ATP_BIND_1, 1 hit
PS51194 HELICASE_CTER, 1 hit
PS00518 ZF_RING_1, 1 hit
PS50089 ZF_RING_2, 1 hit

Sequencei

Sequence statusi: Complete.

O60177-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MRNNTAFEQF TLNPCEQIPL DDKHNIGFNK NNTPDYSSSA SSDQLLKNDI
60 70 80 90 100
NRHEMERRIA FLNRKQALFN AFMHDSSSSL NTMESNIEKV NGLFPNDNSV
110 120 130 140 150
IALKPNEEKL NSSLSVENND STYTDATLIA PKIGLDRPNI NAITIDVDGH
160 170 180 190 200
SLQNEISSST DKLSPSQSDA LFEQKQDSLF WNDNAVIVVS DSESDDNNVR
210 220 230 240 250
TKSSLNDHDK VNMKEKRNLE LAFMNSKRKK LELPSLPVLS TAGPSYTNSL
260 270 280 290 300
ALPPFHHHNN YKMFNTTHTL EDDKFLQGKG TSNNPISLSD EEDNEINFQN
310 320 330 340 350
KRYGSDSVIL PGGLLHDSKL PEPGKHLFHL QWYHDRFHNI EGFNLSDSNN
360 370 380 390 400
QKVQDDQQQQ LEELFKDLDE QLVNDPTIRE GTPAGLIPTL MEHQKEGLMW
410 420 430 440 450
LKRLEESSKK GGILADDMGL GKTVQALALL VTRPPESKSV KTTLIITPVS
460 470 480 490 500
LLQQWHNEIL TKIAPSHRPT VYIHHGSSKK HKIAEQLMSY DIVLTTYNVI
510 520 530 540 550
AYEFKNKMAY DKSIEDNAPI KKFEHLPFFE AEWYRVILDE AQTIKNRNTL
560 570 580 590 600
AARGCCLLES TYRWCLSGTP MQNGVEEFYS LIKFLRIKPY SDWSSFSKDF
610 620 630 640 650
TIPLSSNINT SAPMKRFRGL LKAVLLRRTK NTKIDGKPIL TLPPKTAVKS
660 670 680 690 700
ETDLSSSEME FYNTLQSGAQ IQMRKYLQEG TITTHYGSLL VLLLRLRQAC
710 720 730 740 750
CHPWLIVARE AAVDDNDSFQ AKNRAIYNQI YPEAVNRLKL IETLQCSLCM
760 770 780 790 800
DVVAELLIIV PCGHFLCREC LTHVITSSED MAKQTSNENI SPKCSVCEEY
810 820 830 840 850
IDTERLLSYA LFRRYSGMAP IVDADNKLRT ENISELLPKQ YSNILENRQM
860 870 880 890 900
GMKIFTDPKH WTTSTKIEKA LNAVKEIIKK QPTDKILIFS QFVSFLELFT
910 920 930 940 950
VPFRQEGIKY LMYTGGLSTA ERNQALINFE VDPNVRVLLI SLKAGNVGLN
960 970 980 990 1000
LTCANHVIIL DPFWNPYIEE QAVDRAHRIG QDKPVNILRI VTNNTIEERV
1010 1020 1030 1040
LALQDRKREL IDSALGEKGL REISRLNTKE LSFLFGMSSR
Length:1,040
Mass (Da):118,365
Last modified:August 1, 1998 - v1
Checksum:iF5C7210283512470
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CU329671 Genomic DNA Translation: CAA18870.1
PIRiT39936
RefSeqiNP_596602.1, NM_001022523.2

Genome annotation databases

EnsemblFungiiSPBC23E6.02.1; SPBC23E6.02.1:pep; SPBC23E6.02
GeneIDi2540464
KEGGispo:SPBC23E6.02

Similar proteinsi

Entry informationi

Entry nameiYG42_SCHPO
AccessioniPrimary (citable) accession number: O60177
Entry historyiIntegrated into UniProtKB/Swiss-Prot: November 13, 2007
Last sequence update: August 1, 1998
Last modified: April 25, 2018
This is version 136 of the entry and version 1 of the sequence. See complete history.
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programFungal Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome