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Protein

60S ribosomal protein L7-C

Gene

rpl701

Organism
Schizosaccharomyces pombe (strain 972 / ATCC 24843) (Fission yeast)
Status
Reviewed-Annotation score: Annotation score: 3 out of 5-Experimental evidence at protein leveli

Functioni

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Molecular functioni

Ribonucleoprotein, Ribosomal protein

Enzyme and pathway databases

ReactomeiR-SPO-156827. L13a-mediated translational silencing of Ceruloplasmin expression.
R-SPO-1799339. SRP-dependent cotranslational protein targeting to membrane.
R-SPO-72689. Formation of a pool of free 40S subunits.
R-SPO-72706. GTP hydrolysis and joining of the 60S ribosomal subunit.
R-SPO-975956. Nonsense Mediated Decay (NMD) independent of the Exon Junction Complex (EJC).
R-SPO-975957. Nonsense Mediated Decay (NMD) enhanced by the Exon Junction Complex (EJC).

Names & Taxonomyi

Protein namesi
Recommended name:
60S ribosomal protein L7-C
Gene namesi
Name:rpl701
Synonyms:rpl7c
ORF Names:SPBC18H10.12c
OrganismiSchizosaccharomyces pombe (strain 972 / ATCC 24843) (Fission yeast)
Taxonomic identifieri284812 [NCBI]
Taxonomic lineageiEukaryotaFungiDikaryaAscomycotaTaphrinomycotinaSchizosaccharomycetesSchizosaccharomycetalesSchizosaccharomycetaceaeSchizosaccharomyces
Proteomesi
  • UP000002485 Componenti: Chromosome II

Organism-specific databases

EuPathDBiFungiDB:SPBC18H10.12c.
PomBaseiSPBC18H10.12c. rpl701.

Subcellular locationi

GO - Cellular componenti

  • cytosolic large ribosomal subunit Source: PomBase
  • nucleolus Source: PomBase
  • nucleus Source: PomBase
Complete GO annotation...

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_00001046491 – 25160S ribosomal protein L7-CAdd BLAST251

Amino acid modifications

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Modified residuei58Phosphoserine1 Publication1
Modified residuei245Phosphoserine1 Publication1

Keywords - PTMi

Phosphoprotein

Proteomic databases

MaxQBiO60143.
PRIDEiO60143.

PTM databases

iPTMnetiO60143.

Interactioni

Protein-protein interaction databases

BioGridi277358. 7 interactors.
IntActiO60143. 1 interactor.
MINTiMINT-4677578.

Structurei

3D structure databases

ProteinModelPortaliO60143.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the ribosomal protein L30P family.Curated

Phylogenomic databases

HOGENOMiHOG000170917.
InParanoidiO60143.
KOiK02937.
OMAiNREDFIN.
OrthoDBiEOG092C4MAX.
PhylomeDBiO60143.

Family and domain databases

Gene3Di3.30.1390.20. 2 hits.
InterProiIPR018038. Ribosomal_L30_CS.
IPR016082. Ribosomal_L30_ferredoxin-like.
IPR012988. Ribosomal_L30_N.
IPR005998. Ribosomal_L7_euk.
[Graphical view]
PfamiPF00327. Ribosomal_L30. 1 hit.
PF08079. Ribosomal_L30_N. 1 hit.
[Graphical view]
SUPFAMiSSF55129. SSF55129. 1 hit.
TIGRFAMsiTIGR01310. uL30_euk. 1 hit.
PROSITEiPS00634. RIBOSOMAL_L30. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

O60143-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MAVASSTVPS KEQIFAPESL LKKKKTQEQS REQRVAAAAE KKAAQQKKRE
60 70 80 90 100
LIAKRAESYD AEYRKAEREQ IELGRKARAE GNYYVPDETK LVFVIRIRGI
110 120 130 140 150
NNIPPKARKI MQLLRLIQIN NGVFVKFNKA TKEMLQVVEP YVTYGIPNLK
160 170 180 190 200
TVRELLYKRG FGKVNKQRIA LSDNAIIEAA LGKYSILSIE DLIHEIYTVG
210 220 230 240 250
PNFKQAANFI WPFQLSSPLG GWRDRKFKHF IEGGDAGKRD EHINSLVRKM

L
Length:251
Mass (Da):28,730
Last modified:August 1, 1998 - v1
Checksum:i5382A27E39F3800E
GO

Experimental Info

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Sequence conflicti50 – 51EL → DV in AAB63857 (Ref. 2) Curated2
Sequence conflicti55R → L in AAB63857 (Ref. 2) Curated1
Sequence conflicti68R → L in AAB63857 (Ref. 2) Curated1
Sequence conflicti88E → K in AAB63857 (Ref. 2) Curated1
Sequence conflicti105P → S in AAB63857 (Ref. 2) Curated1

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CU329671 Genomic DNA. Translation: CAA18409.1.
U97365 mRNA. Translation: AAB63857.1.
AB032713 mRNA. Translation: BAA84652.1.
PIRiT39776.
RefSeqiNP_595736.1. NM_001021634.2.

Genome annotation databases

EnsemblFungiiSPBC18H10.12c.1; SPBC18H10.12c.1:pep; SPBC18H10.12c.
GeneIDi2540841.
KEGGispo:SPBC18H10.12c.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CU329671 Genomic DNA. Translation: CAA18409.1.
U97365 mRNA. Translation: AAB63857.1.
AB032713 mRNA. Translation: BAA84652.1.
PIRiT39776.
RefSeqiNP_595736.1. NM_001021634.2.

3D structure databases

ProteinModelPortaliO60143.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

BioGridi277358. 7 interactors.
IntActiO60143. 1 interactor.
MINTiMINT-4677578.

PTM databases

iPTMnetiO60143.

Proteomic databases

MaxQBiO60143.
PRIDEiO60143.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblFungiiSPBC18H10.12c.1; SPBC18H10.12c.1:pep; SPBC18H10.12c.
GeneIDi2540841.
KEGGispo:SPBC18H10.12c.

Organism-specific databases

EuPathDBiFungiDB:SPBC18H10.12c.
PomBaseiSPBC18H10.12c. rpl701.

Phylogenomic databases

HOGENOMiHOG000170917.
InParanoidiO60143.
KOiK02937.
OMAiNREDFIN.
OrthoDBiEOG092C4MAX.
PhylomeDBiO60143.

Enzyme and pathway databases

ReactomeiR-SPO-156827. L13a-mediated translational silencing of Ceruloplasmin expression.
R-SPO-1799339. SRP-dependent cotranslational protein targeting to membrane.
R-SPO-72689. Formation of a pool of free 40S subunits.
R-SPO-72706. GTP hydrolysis and joining of the 60S ribosomal subunit.
R-SPO-975956. Nonsense Mediated Decay (NMD) independent of the Exon Junction Complex (EJC).
R-SPO-975957. Nonsense Mediated Decay (NMD) enhanced by the Exon Junction Complex (EJC).

Miscellaneous databases

PROiO60143.

Family and domain databases

Gene3Di3.30.1390.20. 2 hits.
InterProiIPR018038. Ribosomal_L30_CS.
IPR016082. Ribosomal_L30_ferredoxin-like.
IPR012988. Ribosomal_L30_N.
IPR005998. Ribosomal_L7_euk.
[Graphical view]
PfamiPF00327. Ribosomal_L30. 1 hit.
PF08079. Ribosomal_L30_N. 1 hit.
[Graphical view]
SUPFAMiSSF55129. SSF55129. 1 hit.
TIGRFAMsiTIGR01310. uL30_euk. 1 hit.
PROSITEiPS00634. RIBOSOMAL_L30. 1 hit.
[Graphical view]
ProtoNetiSearch...

Entry informationi

Entry nameiRL7C_SCHPO
AccessioniPrimary (citable) accession number: O60143
Secondary accession number(s): O14371, Q9UTT5
Entry historyi
Integrated into UniProtKB/Swiss-Prot: December 15, 1998
Last sequence update: August 1, 1998
Last modified: November 30, 2016
This is version 114 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programFungal Protein Annotation Program

Miscellaneousi

Miscellaneous

There are three genes for L7 in S.pombe.

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Schizosaccharomyces pombe
    Schizosaccharomyces pombe: entries and gene names
  2. Ribosomal proteins
    Ribosomal proteins families and list of entries
  3. SIMILARITY comments
    Index of protein domains and families

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.