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Protein

Putative transcriptional regulatory protein C16G5.16

Gene

SPBC16G5.16

Organism
Schizosaccharomyces pombe (strain 972 / ATCC 24843) (Fission yeast)
Status
Reviewed-Annotation score: Annotation score: 3 out of 5-Experimental evidence at protein leveli

Functioni

Regions

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
DNA bindingi16 – 4227Zn(2)-C6 fungal-typePROSITE-ProRule annotationAdd
BLAST

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Biological processi

Transcription, Transcription regulation

Keywords - Ligandi

DNA-binding, Metal-binding, Zinc

Names & Taxonomyi

Protein namesi
Recommended name:
Putative transcriptional regulatory protein C16G5.16
Gene namesi
ORF Names:SPBC16G5.16
OrganismiSchizosaccharomyces pombe (strain 972 / ATCC 24843) (Fission yeast)
Taxonomic identifieri284812 [NCBI]
Taxonomic lineageiEukaryotaFungiDikaryaAscomycotaTaphrinomycotinaSchizosaccharomycetesSchizosaccharomycetalesSchizosaccharomycetaceaeSchizosaccharomyces
Proteomesi
  • UP000002485 Componenti: Chromosome II

Organism-specific databases

EuPathDBiFungiDB:SPBC16G5.16.
PomBaseiSPBC16G5.16.

Subcellular locationi

GO - Cellular componenti

  • cytosol Source: PomBase
  • nucleus Source: PomBase
Complete GO annotation...

Keywords - Cellular componenti

Cytoplasm, Nucleus

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 827827Putative transcriptional regulatory protein C16G5.16PRO_0000310383Add
BLAST

Amino acid modifications

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Modified residuei112 – 1121Phosphoserine1 Publication

Keywords - PTMi

Phosphoprotein

Proteomic databases

MaxQBiO60130.

PTM databases

iPTMnetiO60130.

Interactioni

Protein-protein interaction databases

BioGridi276187. 92 interactions.
MINTiMINT-4677476.

Structurei

3D structure databases

ProteinModelPortaliO60130.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Compositional bias

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Compositional biasi166 – 1716Poly-Ser
Compositional biasi275 – 2806Poly-Tyr

Sequence similaritiesi

Belongs to the ASG1 family.Curated
Contains 1 Zn(2)-C6 fungal-type DNA-binding domain.PROSITE-ProRule annotation

Phylogenomic databases

InParanoidiO60130.
OMAiHTKLMFI.
OrthoDBiEOG7WDN9X.
PhylomeDBiO60130.

Family and domain databases

Gene3Di4.10.240.10. 1 hit.
InterProiIPR007219. Transcription_factor_dom_fun.
IPR001138. Zn2-C6_fun-type_DNA-bd.
[Graphical view]
PfamiPF04082. Fungal_trans. 1 hit.
PF00172. Zn_clus. 1 hit.
[Graphical view]
SMARTiSM00906. Fungal_trans. 1 hit.
SM00066. GAL4. 1 hit.
[Graphical view]
SUPFAMiSSF57701. SSF57701. 1 hit.
PROSITEiPS00463. ZN2_CY6_FUNGAL_1. 1 hit.
PS50048. ZN2_CY6_FUNGAL_2. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

O60130-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MSSGDVSRRQ RVSRACDECH RRKIKCDQRR PCSNCIAYNY ECTYGQPFKR
60 70 80 90 100
LRHAPEKYIE FLELRLKYLR GLAEESDPNL KLPSFLAPPN DKDSPVNQSP
110 120 130 140 150
WKRSDSSKRS SSQDEFESLF DRYGQLSLKD DGKADFRGSS SGFVFMKNIH
160 170 180 190 200
QNIARNSTVP NPVQESNSSS SQPDPLSFPY LPPTPAEDEH KKPPLKIQLP
210 220 230 240 250
PYEEALSIVS QFFMNDHFLV HIHHPASFFE KMHMYYKTGK TDNNFHFLLV
260 270 280 290 300
ATLCLGYTYM PDESPSANYP YHEAYEYYYY IRSSFSWEDS YTIEVVQILL
310 320 330 340 350
SVALFALFSS RLSQAYTFTN NALLCCHELG LHKDFSDVLT SHESRLSKRV
360 370 380 390 400
FYSVYVLACY TSTIVGLPLS IEDVDIDQSL PNSFDFTLEN DQVPPRLIAS
410 420 430 440 450
ECTSLEVFIQ HITLSRILSH FVRKVYPVKS PSDSHCKVSL PAVRDHEEKL
460 470 480 490 500
TYWWKNLPSY LKMSEVPKFS PKWIQAIILE LKFRQIELIF YRPFIHSIST
510 520 530 540 550
PIDNQNGSPM KPANFALKCA QSAERVVFLL QELAKSPNTP KLFFNLYSGY
560 570 580 590 600
YALMTLTYCA TLTKDDANKS NNFITKARLG FHCLQMIYRE STYYSTIMEA
610 620 630 640 650
IKNLLIAYDM NSSGTENLDA TPDVTGQLPN NFSQRTSNIP REFPQAQIFY
660 670 680 690 700
SDAPYPGYYN PAQFQNAPTN FPMPTYGGRT QDQSYPRQNG YPSYSDGNVY
710 720 730 740 750
PHDRVMINYG SSMPTANGFY VPNTYSPVPF PYNTSYPPYM SPTSNMPQAF
760 770 780 790 800
QAYSQYPYQH PPFPLSEQML PLPTSGVMMA PGAAKSGMPY PFIQPPSMTN
810 820
QVAYPTVRDG SNNSPDHPSS SNSKRTE
Length:827
Mass (Da):94,566
Last modified:August 1, 1998 - v1
Checksum:i539439B0BD95DE44
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CU329671 Genomic DNA. Translation: CAA19035.1.
PIRiT39608.
RefSeqiNP_596765.1. NM_001023785.2.

Genome annotation databases

EnsemblFungiiSPBC16G5.16.1; SPBC16G5.16.1:pep; SPBC16G5.16.
GeneIDi2539631.
KEGGispo:SPBC16G5.16.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CU329671 Genomic DNA. Translation: CAA19035.1.
PIRiT39608.
RefSeqiNP_596765.1. NM_001023785.2.

3D structure databases

ProteinModelPortaliO60130.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

BioGridi276187. 92 interactions.
MINTiMINT-4677476.

PTM databases

iPTMnetiO60130.

Proteomic databases

MaxQBiO60130.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblFungiiSPBC16G5.16.1; SPBC16G5.16.1:pep; SPBC16G5.16.
GeneIDi2539631.
KEGGispo:SPBC16G5.16.

Organism-specific databases

EuPathDBiFungiDB:SPBC16G5.16.
PomBaseiSPBC16G5.16.

Phylogenomic databases

InParanoidiO60130.
OMAiHTKLMFI.
OrthoDBiEOG7WDN9X.
PhylomeDBiO60130.

Miscellaneous databases

PROiO60130.

Family and domain databases

Gene3Di4.10.240.10. 1 hit.
InterProiIPR007219. Transcription_factor_dom_fun.
IPR001138. Zn2-C6_fun-type_DNA-bd.
[Graphical view]
PfamiPF04082. Fungal_trans. 1 hit.
PF00172. Zn_clus. 1 hit.
[Graphical view]
SMARTiSM00906. Fungal_trans. 1 hit.
SM00066. GAL4. 1 hit.
[Graphical view]
SUPFAMiSSF57701. SSF57701. 1 hit.
PROSITEiPS00463. ZN2_CY6_FUNGAL_1. 1 hit.
PS50048. ZN2_CY6_FUNGAL_2. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. "The genome sequence of Schizosaccharomyces pombe."
    Wood V., Gwilliam R., Rajandream M.A., Lyne M.H., Lyne R., Stewart A., Sgouros J.G., Peat N., Hayles J., Baker S.G., Basham D., Bowman S., Brooks K., Brown D., Brown S., Chillingworth T., Churcher C.M., Collins M.
    , Connor R., Cronin A., Davis P., Feltwell T., Fraser A., Gentles S., Goble A., Hamlin N., Harris D.E., Hidalgo J., Hodgson G., Holroyd S., Hornsby T., Howarth S., Huckle E.J., Hunt S., Jagels K., James K.D., Jones L., Jones M., Leather S., McDonald S., McLean J., Mooney P., Moule S., Mungall K.L., Murphy L.D., Niblett D., Odell C., Oliver K., O'Neil S., Pearson D., Quail M.A., Rabbinowitsch E., Rutherford K.M., Rutter S., Saunders D., Seeger K., Sharp S., Skelton J., Simmonds M.N., Squares R., Squares S., Stevens K., Taylor K., Taylor R.G., Tivey A., Walsh S.V., Warren T., Whitehead S., Woodward J.R., Volckaert G., Aert R., Robben J., Grymonprez B., Weltjens I., Vanstreels E., Rieger M., Schaefer M., Mueller-Auer S., Gabel C., Fuchs M., Duesterhoeft A., Fritzc C., Holzer E., Moestl D., Hilbert H., Borzym K., Langer I., Beck A., Lehrach H., Reinhardt R., Pohl T.M., Eger P., Zimmermann W., Wedler H., Wambutt R., Purnelle B., Goffeau A., Cadieu E., Dreano S., Gloux S., Lelaure V., Mottier S., Galibert F., Aves S.J., Xiang Z., Hunt C., Moore K., Hurst S.M., Lucas M., Rochet M., Gaillardin C., Tallada V.A., Garzon A., Thode G., Daga R.R., Cruzado L., Jimenez J., Sanchez M., del Rey F., Benito J., Dominguez A., Revuelta J.L., Moreno S., Armstrong J., Forsburg S.L., Cerutti L., Lowe T., McCombie W.R., Paulsen I., Potashkin J., Shpakovski G.V., Ussery D., Barrell B.G., Nurse P.
    Nature 415:871-880(2002) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: 972 / ATCC 24843.
  2. "ORFeome cloning and global analysis of protein localization in the fission yeast Schizosaccharomyces pombe."
    Matsuyama A., Arai R., Yashiroda Y., Shirai A., Kamata A., Sekido S., Kobayashi Y., Hashimoto A., Hamamoto M., Hiraoka Y., Horinouchi S., Yoshida M.
    Nat. Biotechnol. 24:841-847(2006) [PubMed] [Europe PMC] [Abstract]
    Cited for: SUBCELLULAR LOCATION [LARGE SCALE ANALYSIS].
  3. Cited for: PHOSPHORYLATION [LARGE SCALE ANALYSIS] AT SER-112, IDENTIFICATION BY MASS SPECTROMETRY.

Entry informationi

Entry nameiYH7G_SCHPO
AccessioniPrimary (citable) accession number: O60130
Entry historyi
Integrated into UniProtKB/Swiss-Prot: November 13, 2007
Last sequence update: August 1, 1998
Last modified: June 8, 2016
This is version 98 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programFungal Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Schizosaccharomyces pombe
    Schizosaccharomyces pombe: entries and gene names
  2. SIMILARITY comments
    Index of protein domains and families

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.