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Protein

Uncharacterized protein C16G5.07c

Gene

SPBC16G5.07c

Organism
Schizosaccharomyces pombe (strain 972 / ATCC 24843) (Fission yeast)
Status
Reviewed-Annotation score: Annotation score: 2 out of 5-Protein inferred from homologyi

Functioni

GO - Biological processi

Complete GO annotation...

Names & Taxonomyi

Protein namesi
Recommended name:
Uncharacterized protein C16G5.07c
Gene namesi
ORF Names:SPBC16G5.07c
OrganismiSchizosaccharomyces pombe (strain 972 / ATCC 24843) (Fission yeast)
Taxonomic identifieri284812 [NCBI]
Taxonomic lineageiEukaryotaFungiDikaryaAscomycotaTaphrinomycotinaSchizosaccharomycetesSchizosaccharomycetalesSchizosaccharomycetaceaeSchizosaccharomyces
Proteomesi
  • UP000002485 Componenti: Chromosome II

Organism-specific databases

EuPathDBiFungiDB:SPBC16G5.07c.
PomBaseiSPBC16G5.07c.

Subcellular locationi

GO - Cellular componenti

  • membrane Source: InterPro
  • mitochondrion Source: PomBase
Complete GO annotation...

Keywords - Cellular componenti

Mitochondrion

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 354354Uncharacterized protein C16G5.07cPRO_0000316209Add
BLAST

Proteomic databases

MaxQBiO60121.
PRIDEiO60121.

Interactioni

Protein-protein interaction databases

BioGridi276423. 6 interactions.
MINTiMINT-4677365.

Structurei

3D structure databases

ProteinModelPortaliO60121.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the band 7/mec-2 family.Curated

Phylogenomic databases

HOGENOMiHOG000217038.
InParanoidiO60121.
OMAiGVTDYRY.
OrthoDBiEOG7TJ3VD.
PhylomeDBiO60121.

Family and domain databases

InterProiIPR001107. Band_7.
IPR032435. Band_7_C.
IPR001972. Stomatin_fam.
[Graphical view]
PANTHERiPTHR10264. PTHR10264. 1 hit.
PfamiPF01145. Band_7. 1 hit.
PF16200. Band_7_C. 1 hit.
[Graphical view]
PRINTSiPR00721. STOMATIN.
SMARTiSM00244. PHB. 1 hit.
[Graphical view]
SUPFAMiSSF117892. SSF117892. 1 hit.

Sequencei

Sequence statusi: Complete.

O60121-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MLKLFLSTPR TLPNSRFLLL RRLQPLGLRY RSDASSLHLF TPTWRDHATN
60 70 80 90 100
TIIKFVPQQV AYVVERMGRF SRILTPGVAF LAPIIDKIAY IHSLKERALE
110 120 130 140 150
IPTQSAITLD NVSLGLDGVL YIQVYDPYKA SYGVEDADYA ISQLAQTTMR
160 170 180 190 200
SEIGRLTLDH VLRERQSLNI HITDAINKAA ESWGIRCLRH EIRDIRPPES
210 220 230 240 250
VVMAMHQQVS AERQKRAEIL ESEGKRQAAI NVAEGDKQAE ILDSEGQKIK
260 270 280 290 300
TINSALAEAQ AIREKASATA SGIAVLADSI KKQEHGLEAV SLYIAQQYIT
310 320 330 340 350
NFGKLAKASN SMIVPASTSD VSGMVAQALS IFKQVSKTTA PDKSTPKELH

TDEK
Length:354
Mass (Da):39,274
Last modified:August 1, 1998 - v1
Checksum:i66B09E6A12BDC030
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CU329671 Genomic DNA. Translation: CAA19027.1.
PIRiT39599.
RefSeqiNP_596756.1. NM_001023776.2.

Genome annotation databases

EnsemblFungiiSPBC16G5.07c.1; SPBC16G5.07c.1:pep; SPBC16G5.07c.
GeneIDi2539877.
KEGGispo:SPBC16G5.07c.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CU329671 Genomic DNA. Translation: CAA19027.1.
PIRiT39599.
RefSeqiNP_596756.1. NM_001023776.2.

3D structure databases

ProteinModelPortaliO60121.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

BioGridi276423. 6 interactions.
MINTiMINT-4677365.

Proteomic databases

MaxQBiO60121.
PRIDEiO60121.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblFungiiSPBC16G5.07c.1; SPBC16G5.07c.1:pep; SPBC16G5.07c.
GeneIDi2539877.
KEGGispo:SPBC16G5.07c.

Organism-specific databases

EuPathDBiFungiDB:SPBC16G5.07c.
PomBaseiSPBC16G5.07c.

Phylogenomic databases

HOGENOMiHOG000217038.
InParanoidiO60121.
OMAiGVTDYRY.
OrthoDBiEOG7TJ3VD.
PhylomeDBiO60121.

Miscellaneous databases

NextBioi20801022.
PROiO60121.

Family and domain databases

InterProiIPR001107. Band_7.
IPR032435. Band_7_C.
IPR001972. Stomatin_fam.
[Graphical view]
PANTHERiPTHR10264. PTHR10264. 1 hit.
PfamiPF01145. Band_7. 1 hit.
PF16200. Band_7_C. 1 hit.
[Graphical view]
PRINTSiPR00721. STOMATIN.
SMARTiSM00244. PHB. 1 hit.
[Graphical view]
SUPFAMiSSF117892. SSF117892. 1 hit.
ProtoNetiSearch...

Publicationsi

  1. "The genome sequence of Schizosaccharomyces pombe."
    Wood V., Gwilliam R., Rajandream M.A., Lyne M.H., Lyne R., Stewart A., Sgouros J.G., Peat N., Hayles J., Baker S.G., Basham D., Bowman S., Brooks K., Brown D., Brown S., Chillingworth T., Churcher C.M., Collins M.
    , Connor R., Cronin A., Davis P., Feltwell T., Fraser A., Gentles S., Goble A., Hamlin N., Harris D.E., Hidalgo J., Hodgson G., Holroyd S., Hornsby T., Howarth S., Huckle E.J., Hunt S., Jagels K., James K.D., Jones L., Jones M., Leather S., McDonald S., McLean J., Mooney P., Moule S., Mungall K.L., Murphy L.D., Niblett D., Odell C., Oliver K., O'Neil S., Pearson D., Quail M.A., Rabbinowitsch E., Rutherford K.M., Rutter S., Saunders D., Seeger K., Sharp S., Skelton J., Simmonds M.N., Squares R., Squares S., Stevens K., Taylor K., Taylor R.G., Tivey A., Walsh S.V., Warren T., Whitehead S., Woodward J.R., Volckaert G., Aert R., Robben J., Grymonprez B., Weltjens I., Vanstreels E., Rieger M., Schaefer M., Mueller-Auer S., Gabel C., Fuchs M., Duesterhoeft A., Fritzc C., Holzer E., Moestl D., Hilbert H., Borzym K., Langer I., Beck A., Lehrach H., Reinhardt R., Pohl T.M., Eger P., Zimmermann W., Wedler H., Wambutt R., Purnelle B., Goffeau A., Cadieu E., Dreano S., Gloux S., Lelaure V., Mottier S., Galibert F., Aves S.J., Xiang Z., Hunt C., Moore K., Hurst S.M., Lucas M., Rochet M., Gaillardin C., Tallada V.A., Garzon A., Thode G., Daga R.R., Cruzado L., Jimenez J., Sanchez M., del Rey F., Benito J., Dominguez A., Revuelta J.L., Moreno S., Armstrong J., Forsburg S.L., Cerutti L., Lowe T., McCombie W.R., Paulsen I., Potashkin J., Shpakovski G.V., Ussery D., Barrell B.G., Nurse P.
    Nature 415:871-880(2002) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: 972 / ATCC 24843.
  2. "ORFeome cloning and global analysis of protein localization in the fission yeast Schizosaccharomyces pombe."
    Matsuyama A., Arai R., Yashiroda Y., Shirai A., Kamata A., Sekido S., Kobayashi Y., Hashimoto A., Hamamoto M., Hiraoka Y., Horinouchi S., Yoshida M.
    Nat. Biotechnol. 24:841-847(2006) [PubMed] [Europe PMC] [Abstract]
    Cited for: SUBCELLULAR LOCATION [LARGE SCALE ANALYSIS].

Entry informationi

Entry nameiYH77_SCHPO
AccessioniPrimary (citable) accession number: O60121
Entry historyi
Integrated into UniProtKB/Swiss-Prot: February 5, 2008
Last sequence update: August 1, 1998
Last modified: January 20, 2016
This is version 92 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programFungal Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Schizosaccharomyces pombe
    Schizosaccharomyces pombe: entries and gene names
  2. SIMILARITY comments
    Index of protein domains and families

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.