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Protein

54S ribosomal protein L23, mitochondrial

Gene

mrpl23

Organism
Schizosaccharomyces pombe (strain 972 / ATCC 24843) (Fission yeast)
Status
Reviewed-Annotation score: Annotation score: 2 out of 5-Protein inferred from homologyi

Functioni

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Molecular functioni

Ribonucleoprotein, Ribosomal protein

Names & Taxonomyi

Protein namesi
Recommended name:
54S ribosomal protein L23, mitochondrial
Gene namesi
Name:mrpl23Imported
ORF Names:SPBC16G5.04
OrganismiSchizosaccharomyces pombe (strain 972 / ATCC 24843) (Fission yeast)
Taxonomic identifieri284812 [NCBI]
Taxonomic lineageiEukaryotaFungiDikaryaAscomycotaTaphrinomycotinaSchizosaccharomycetesSchizosaccharomycetalesSchizosaccharomycetaceaeSchizosaccharomyces
Proteomesi
  • UP000002485 Componenti: Chromosome II

Organism-specific databases

EuPathDBiFungiDB:SPBC16G5.04.
PomBaseiSPBC16G5.04. mrpl23.

Subcellular locationi

GO - Cellular componenti

  • mitochondrial large ribosomal subunit Source: PomBase
  • mitochondrion Source: PomBase
  • ribosome Source: GO_Central
Complete GO annotation...

Keywords - Cellular componenti

Mitochondrion

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Transit peptidei1 – 29MitochondrionSequence analysisAdd BLAST29
ChainiPRO_000031462730 – 15754S ribosomal protein L23, mitochondrialAdd BLAST128

Proteomic databases

MaxQBiO60118.
PRIDEiO60118.

Interactioni

Subunit structurei

Component of the mitochondrial large ribosomal subunit.By similarity

Protein-protein interaction databases

MINTiMINT-4677343.

Structurei

3D structure databases

ProteinModelPortaliO60118.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the ribosomal protein L13P family.Sequence analysis

Keywords - Domaini

Transit peptide

Phylogenomic databases

HOGENOMiHOG000225288.
InParanoidiO60118.
KOiK02871.
OMAiAYARVWH.
OrthoDBiEOG092C59OH.
PhylomeDBiO60118.

Family and domain databases

CDDicd00392. Ribosomal_L13. 1 hit.
Gene3Di3.90.1180.10. 1 hit.
HAMAPiMF_01366. Ribosomal_L13. 1 hit.
InterProiIPR005822. Ribosomal_L13.
IPR005823. Ribosomal_L13_bac-type.
[Graphical view]
PANTHERiPTHR11545. PTHR11545. 1 hit.
PfamiPF00572. Ribosomal_L13. 1 hit.
[Graphical view]
PIRSFiPIRSF002181. Ribosomal_L13. 1 hit.
SUPFAMiSSF52161. SSF52161. 1 hit.
TIGRFAMsiTIGR01066. rplM_bact. 1 hit.

Sequencei

Sequence statusi: Complete.

Sequence processingi: The displayed sequence is further processed into a mature form.

O60118-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MSTLNGQTAL AYAKVWHHVS AKNVPLGRLA SQIATTLMGK HKPIYHPAAD
60 70 80 90 100
CGDVVVVTDC SEIGISGRKL ENHKYYSHSG QPGHLKEWTM EEMAAKRGHK
110 120 130 140 150
DLLRRAVGGM LPRNKLWDRR MKRLYIYDGA EHPYKANIFR SYHNPVSSQI

AKELFSK
Length:157
Mass (Da):17,768
Last modified:August 1, 1998 - v1
Checksum:i47E52BF7BBFA42D5
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CU329671 Genomic DNA. Translation: CAA19024.1.
PIRiT39596.
RefSeqiNP_596753.1. NM_001023773.2.

Genome annotation databases

EnsemblFungiiSPBC16G5.04.1; SPBC16G5.04.1:pep; SPBC16G5.04.
GeneIDi2540088.
KEGGispo:SPBC16G5.04.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CU329671 Genomic DNA. Translation: CAA19024.1.
PIRiT39596.
RefSeqiNP_596753.1. NM_001023773.2.

3D structure databases

ProteinModelPortaliO60118.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

MINTiMINT-4677343.

Proteomic databases

MaxQBiO60118.
PRIDEiO60118.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblFungiiSPBC16G5.04.1; SPBC16G5.04.1:pep; SPBC16G5.04.
GeneIDi2540088.
KEGGispo:SPBC16G5.04.

Organism-specific databases

EuPathDBiFungiDB:SPBC16G5.04.
PomBaseiSPBC16G5.04. mrpl23.

Phylogenomic databases

HOGENOMiHOG000225288.
InParanoidiO60118.
KOiK02871.
OMAiAYARVWH.
OrthoDBiEOG092C59OH.
PhylomeDBiO60118.

Miscellaneous databases

PROiO60118.

Family and domain databases

CDDicd00392. Ribosomal_L13. 1 hit.
Gene3Di3.90.1180.10. 1 hit.
HAMAPiMF_01366. Ribosomal_L13. 1 hit.
InterProiIPR005822. Ribosomal_L13.
IPR005823. Ribosomal_L13_bac-type.
[Graphical view]
PANTHERiPTHR11545. PTHR11545. 1 hit.
PfamiPF00572. Ribosomal_L13. 1 hit.
[Graphical view]
PIRSFiPIRSF002181. Ribosomal_L13. 1 hit.
SUPFAMiSSF52161. SSF52161. 1 hit.
TIGRFAMsiTIGR01066. rplM_bact. 1 hit.
ProtoNetiSearch...

Entry informationi

Entry nameiRM23_SCHPO
AccessioniPrimary (citable) accession number: O60118
Entry historyi
Integrated into UniProtKB/Swiss-Prot: January 15, 2008
Last sequence update: August 1, 1998
Last modified: October 5, 2016
This is version 99 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programFungal Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Schizosaccharomyces pombe
    Schizosaccharomyces pombe: entries and gene names
  2. Ribosomal proteins
    Ribosomal proteins families and list of entries
  3. SIMILARITY comments
    Index of protein domains and families

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.