Skip Header

Contribute Send feedback
Read comments (?) or add your own

O60058 (AFG2_SCHPO) Reviewed, UniProtKB/Swiss-Prot

Last modified December 14, 2011. Version 77. Feed History...

Clusters with 100%, 90%, 50% identity | Documents (2) | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info·DocumentsCustomize order

Names and origin

Protein namesRecommended name:
ATPase family gene 2 protein
Gene names
Name:afg2
ORF Names:SPBC56F2.07c
OrganismSchizosaccharomyces pombe (strain 972 / ATCC 24843) (Fission yeast)
Taxonomic identifier284812 [NCBI]
Taxonomic lineageEukaryotaFungiDikaryaAscomycotaTaphrinomycotinaSchizosaccharomycetesSchizosaccharomycetalesSchizosaccharomycetaceaeSchizosaccharomyces

Protein attributes

Sequence length809 AA.
Sequence statusComplete.
Protein existenceEvidence at transcript level

General annotation (Comments)

Subcellular location

Cytoplasm Ref.2.

Sequence similarities

Belongs to the AAA ATPase family. AFG2 subfamily.

Ontologies

Keywords
   Cellular componentCytoplasm
   DomainRepeat
   LigandATP-binding
Nucleotide-binding
   Technical termComplete proteome
Reference proteome
Gene Ontology (GO)
   Biological processribosomal large subunit biogenesis

Inferred from sequence or structural similarity. Source: GeneDB_Spombe

   Cellular componentcytosol

Inferred from direct assay. Source: GeneDB_Spombe

   Molecular functionATP binding

Inferred from electronic annotation. Source: UniProtKB-KW

nucleoside-triphosphatase activity

Inferred from electronic annotation. Source: InterPro

Complete GO annotation...

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Chain1 – 809809ATPase family gene 2 protein
PRO_0000310282

Regions

Nucleotide binding320 – 3278ATP 1 Potential
Nucleotide binding589 – 5968ATP 2 Potential

Sequences

Sequence LengthMass (Da)Tools
O60058 [UniParc].

Last modified August 1, 1998. Version 1.
Checksum: C32BED83A7F876B8

FASTA80988,472
        10         20         30         40         50         60 
MSVAIKFTVK INDGSLRRQQ TRHVFLSPAA LNRLKLSPSQ VIYLKHKGGE AVGITQSVKG 

        70         80         90        100        110        120 
NGIGPFEILI SPLLAKWANL KAFQRVNISQ YVHPLKEAEG IKIVASLSSN NEPIPESLIR 

       130        140        150        160        170        180 
KELLEIRYLH PGMIVMGESP MNMAKSGSKN LSSENMATEI FEINSGLSAQ SGTEVGSSQS 

       190        200        210        220        230        240 
SPSVNESEPK ATEDLDELSP GSYKVKEIHI RSPSNLIEAI SDMSLDEPRI YKFTAASSME 

       250        260        270        280        290        300 
IETPDLLKLP HEDRTQSAYN QGSEETQNFD GPPSAVTFSS IGGLQAQIAQ IRDIVELPFQ 

       310        320        330        340        350        360 
NPELFKFFNI MPPRGVLLYG PPGTGKTMVM RAVAAEANAQ VFTIDGPSVV GKYLGETESR 

       370        380        390        400        410        420 
LRKIFEDARA HQPSIIFIDE IDALAPKRTE DVSEAESRAV ATLLTLLDGM ANAGKVVVIA 

       430        440        450        460        470        480 
ATNRPNSIDE ALRRPGRLEK EIEIGIPDKS ARLDIIKLLL SGVPNEINDA QLEDLASRTH 

       490        500        510        520        530        540 
AYVGADLAAV VREAALRAIK RTISLQKDTS GLDIFGAVQM DDLEFALSSV RQSAMREFMM 

       550        560        570        580        590        600 
ESPNVHWSDI GGQEEVKQKL KESVEWPLTH GETFSRLGVR PPKGVLLYGP PGCSKTITAK 

       610        620        630        640        650        660 
AIATETGLNF IAVKGPELFD KFVGESERAV RQVFQKARQA SPSVIFFDEI DALTANRGED 

       670        680        690        700        710        720 
NSSDRVVAAL LNELDGIEAL RNVLVLAATN RPDMIDPALM RPGRLDRLLY VGPPNFEARK 

       730        740        750        760        770        780 
QIVKIQAEKM KFAEDVDLDL IAEKTEGCSG AEVVALCQEA GLIAMHEDLE AKEICQAHFK 

       790        800 
TALLALRKAI TRDMLEYYAS FSESVTSIS 

« Hide

References

[1]"The genome sequence of Schizosaccharomyces pombe."
Wood V., Gwilliam R., Rajandream M.A., Lyne M.H., Lyne R., Stewart A., Sgouros J.G., Peat N., Hayles J., Baker S.G., Basham D., Bowman S., Brooks K., Brown D., Brown S., Chillingworth T., Churcher C.M., Collins M. expand/collapse author list , Connor R., Cronin A., Davis P., Feltwell T., Fraser A., Gentles S., Goble A., Hamlin N., Harris D.E., Hidalgo J., Hodgson G., Holroyd S., Hornsby T., Howarth S., Huckle E.J., Hunt S., Jagels K., James K.D., Jones L., Jones M., Leather S., McDonald S., McLean J., Mooney P., Moule S., Mungall K.L., Murphy L.D., Niblett D., Odell C., Oliver K., O'Neil S., Pearson D., Quail M.A., Rabbinowitsch E., Rutherford K.M., Rutter S., Saunders D., Seeger K., Sharp S., Skelton J., Simmonds M.N., Squares R., Squares S., Stevens K., Taylor K., Taylor R.G., Tivey A., Walsh S.V., Warren T., Whitehead S., Woodward J.R., Volckaert G., Aert R., Robben J., Grymonprez B., Weltjens I., Vanstreels E., Rieger M., Schaefer M., Mueller-Auer S., Gabel C., Fuchs M., Duesterhoeft A., Fritzc C., Holzer E., Moestl D., Hilbert H., Borzym K., Langer I., Beck A., Lehrach H., Reinhardt R., Pohl T.M., Eger P., Zimmermann W., Wedler H., Wambutt R., Purnelle B., Goffeau A., Cadieu E., Dreano S., Gloux S., Lelaure V., Mottier S., Galibert F., Aves S.J., Xiang Z., Hunt C., Moore K., Hurst S.M., Lucas M., Rochet M., Gaillardin C., Tallada V.A., Garzon A., Thode G., Daga R.R., Cruzado L., Jimenez J., Sanchez M., del Rey F., Benito J., Dominguez A., Revuelta J.L., Moreno S., Armstrong J., Forsburg S.L., Cerutti L., Lowe T., McCombie W.R., Paulsen I., Potashkin J., Shpakovski G.V., Ussery D., Barrell B.G., Nurse P.
Nature 415:871-880(2002) [PubMed: 11859360] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: 972 / ATCC 24843.
[2]"ORFeome cloning and global analysis of protein localization in the fission yeast Schizosaccharomyces pombe."
Matsuyama A., Arai R., Yashiroda Y., Shirai A., Kamata A., Sekido S., Kobayashi Y., Hashimoto A., Hamamoto M., Hiraoka Y., Horinouchi S., Yoshida M.
Nat. Biotechnol. 24:841-847(2006) [PubMed: 16823372] [Abstract]
Cited for: SUBCELLULAR LOCATION [LARGE SCALE ANALYSIS].
+Additional computationally mapped references.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CU329671 Genomic DNA. Translation: CAA18886.1.
PIRT40537.
RefSeqNP_596710.1. NM_001022635.1.

3D structure databases

HSSPHSSP built from PDB template 1YPW based on UniProtKB Q01853.
ProteinModelPortalO60058.
ModBaseSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblFungiSPBC56F2.07c.1; SPBC56F2.07c.1:pep; SPBC56F2.07c.
GeneID2540537.
GenomeReviewsGene locus afg2 in contig CU329671_GR.
KEGGspo:SPBC56F2.07c.
NMPDRfig|4896.1.peg.2576.

Organism-specific databases

GeneDB_SpombeSPBC56F2.07c.

Phylogenomic databases

eggNOGfuNOG07751.
GeneTreeEFGT00050000000010.
HOGENOMHBG597299.
OMACVANEND.
OrthoDBEOG49CTH0.

Gene expression databases

ArrayExpressO60058.

Family and domain databases

InterProIPR003593. ATPase_AAA+_core.
IPR003959. ATPase_AAA_core.
IPR003960. ATPase_AAA_CS.
[Graphical view]
KOK14575.
PfamPF00004. AAA. 2 hits.
[Graphical view]
SMARTSM00382. AAA. 2 hits.
[Graphical view]
PROSITEPS00674. AAA. 2 hits.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameAFG2_SCHPO
AccessionPrimary (citable) accession number: O60058
Entry history
Integrated into UniProtKB/Swiss-Prot: November 13, 2007
Last sequence update: August 1, 1998
Last modified: December 14, 2011
This is version 77 of the entry and version 1 of the sequence. [Complete history]
Entry statusReviewed (UniProtKB/Swiss-Prot)
Annotation programFungal Protein Annotation Program

Relevant documents

Schizosaccharomyces pombe

Schizosaccharomyces pombe: entries and gene names

SIMILARITY comments

Index of protein domains and families