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Protein

Beta-xylanase

Gene

XYL2

Organism
Fusarium oxysporum f. sp. lycopersici
Status
Unreviewed-Annotation score: Annotation score: 2 out of 5-Protein inferred from homologyi

Functioni

Catalytic activityi

Endohydrolysis of (1->4)-beta-D-xylosidic linkages in xylans.UniRule annotation

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Molecular functioni

GlycosidaseUniRule annotation, Hydrolase

Keywords - Biological processi

Carbohydrate metabolism, Polysaccharide degradation, Xylan degradationImported

Enzyme and pathway databases

BRENDAi3.2.1.8. 2351.

Protein family/group databases

CAZyiGH10. Glycoside Hydrolase Family 10.

Names & Taxonomyi

Protein namesi
Recommended name:
Beta-xylanaseUniRule annotation (EC:3.2.1.8UniRule annotation)
Gene namesi
Name:XYL2Imported
OrganismiFusarium oxysporum f. sp. lycopersiciImported
Taxonomic identifieri59765 [NCBI]
Taxonomic lineageiEukaryotaFungiDikaryaAscomycotaPezizomycotinaSordariomycetesHypocreomycetidaeHypocrealesNectriaceaeFusariumFusarium oxysporum species complex

Structurei

3D structure databases

ProteinModelPortaliO59938.
SMRiO59938. Positions 24-328.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Domaini43 – 326284GH10 (glycosyl hydrolase family 10)InterPro annotationAdd
BLAST

Sequence similaritiesi

Belongs to the glycosyl hydrolase 10 (cellulase F) family.UniRule annotation

Family and domain databases

Gene3Di3.20.20.80. 1 hit.
InterProiIPR001000. GH10.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
[Graphical view]
PfamiPF00331. Glyco_hydro_10. 1 hit.
[Graphical view]
PRINTSiPR00134. GLHYDRLASE10.
SMARTiSM00633. Glyco_10. 1 hit.
[Graphical view]
SUPFAMiSSF51445. SSF51445. 1 hit.
PROSITEiPS51760. GH10_2. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

O59938-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MKLSSFLYTA SLVAAIPTAI EPRQASDSIN KLIKNKGKLY YGTITDPNLL
60 70 80 90 100
GVAKDTAIIK ADFGAVTPEN SMKWDATEPS QGKFNFGSFD QVVNFAQQNG
110 120 130 140 150
LKVRGHTVVW HSQLPQWVKN INDKATLTKV IENHVTNVVG RYKGKIYAWD
160 170 180 190 200
VVNEIFDWDG TLRKDSHFNN VFGNDDYVGI AFRAARKADP NAKLYINDYS
210 220 230 240 250
LDSGSASKVT KGMVPSVKKW LSQGVPVDGI GSQTHLDPGA AGQIQGALTA
260 270 280 290 300
LANSGVKEVA ITELDIRTAP ANDYATVTKA CLNVPKCIGI TVWGVSDKNS
310 320
WRKEHDSLLF DANYNPKAAY TAVVNALR
Length:328
Mass (Da):35,781
Last modified:August 1, 1998 - v1
Checksum:i42BC025FABD56630
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AF052583 Genomic DNA. Translation: AAC06240.1.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AF052583 Genomic DNA. Translation: AAC06240.1.

3D structure databases

ProteinModelPortaliO59938.
SMRiO59938. Positions 24-328.
ModBaseiSearch...
MobiDBiSearch...

Protein family/group databases

CAZyiGH10. Glycoside Hydrolase Family 10.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Enzyme and pathway databases

BRENDAi3.2.1.8. 2351.

Family and domain databases

Gene3Di3.20.20.80. 1 hit.
InterProiIPR001000. GH10.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
[Graphical view]
PfamiPF00331. Glyco_hydro_10. 1 hit.
[Graphical view]
PRINTSiPR00134. GLHYDRLASE10.
SMARTiSM00633. Glyco_10. 1 hit.
[Graphical view]
SUPFAMiSSF51445. SSF51445. 1 hit.
PROSITEiPS51760. GH10_2. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. "Two xylanase genes of the vascular wilt pathogen Fusarium oxysporum are differentially expressed during infection of tomato plants."
    Ruiz-Roldan M.C., Di Pietro A., Huertas-Gonzalez M.D., Roncero M.I.
    Mol. Gen. Genet. 261:530-536(1999) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE.
    Strain: 42-87Imported.

Entry informationi

Entry nameiO59938_FUSOX
AccessioniPrimary (citable) accession number: O59938
Entry historyi
Integrated into UniProtKB/TrEMBL: August 1, 1998
Last sequence update: August 1, 1998
Last modified: April 13, 2016
This is version 70 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.