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Protein

Uncharacterized transcriptional regulatory protein C320.03

Gene

SPCC320.03

Organism
Schizosaccharomyces pombe (strain 972 / ATCC 24843) (Fission yeast)
Status
Reviewed-Annotation score: Annotation score: 2 out of 5-Protein inferred from homologyi

Functioni

Regions

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
DNA bindingi76 – 10833Zn(2)-C6 fungal-typePROSITE-ProRule annotationAdd
BLAST

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Biological processi

Transcription, Transcription regulation

Keywords - Ligandi

DNA-binding, Metal-binding, Zinc

Names & Taxonomyi

Protein namesi
Recommended name:
Uncharacterized transcriptional regulatory protein C320.03
Gene namesi
ORF Names:SPCC320.03
OrganismiSchizosaccharomyces pombe (strain 972 / ATCC 24843) (Fission yeast)
Taxonomic identifieri284812 [NCBI]
Taxonomic lineageiEukaryotaFungiDikaryaAscomycotaTaphrinomycotinaSchizosaccharomycetesSchizosaccharomycetalesSchizosaccharomycetaceaeSchizosaccharomyces
Proteomesi
  • UP000002485 Componenti: Chromosome III

Organism-specific databases

EuPathDBiFungiDB:SPCC320.03.
PomBaseiSPCC320.03.

Subcellular locationi

GO - Cellular componenti

  • nucleus Source: PomBase
Complete GO annotation...

Keywords - Cellular componenti

Nucleus

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 867867Uncharacterized transcriptional regulatory protein C320.03PRO_0000310377Add
BLAST

Interactioni

Protein-protein interaction databases

BioGridi275523. 12 interactions.
MINTiMINT-4676131.

Structurei

3D structure databases

ProteinModelPortaliO59780.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Compositional bias

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Compositional biasi217 – 329113Pro-richAdd
BLAST

Sequence similaritiesi

Contains 1 Zn(2)-C6 fungal-type DNA-binding domain.PROSITE-ProRule annotation

Phylogenomic databases

InParanoidiO59780.
OrthoDBiEOG7JMGP0.
PhylomeDBiO59780.

Family and domain databases

Gene3Di4.10.240.10. 1 hit.
InterProiIPR007219. Transcription_factor_dom_fun.
IPR001138. Zn2-C6_fun-type_DNA-bd.
[Graphical view]
PfamiPF04082. Fungal_trans. 1 hit.
PF00172. Zn_clus. 1 hit.
[Graphical view]
SMARTiSM00066. GAL4. 1 hit.
[Graphical view]
SUPFAMiSSF57701. SSF57701. 1 hit.
PROSITEiPS00463. ZN2_CY6_FUNGAL_1. 1 hit.
PS50048. ZN2_CY6_FUNGAL_2. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

O59780-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MDLNTLPFHS INSVNVSSAP TVNERSYPFL LDASAGVSGF NPVVSSPEKK
60 70 80 90 100
ARMKYKKNST SPNMDVKSRK KVSRACDFCR QKKIRCDMDQ SPRPGNACIN
110 120 130 140 150
CRKHHLDCNF TRTPLKRGPA KGFNRNADEK QKRASGSAKS SSPAVNGSVF
160 170 180 190 200
SGNEASPSSR APSITPVDSV NTTTSAIQVP SVTLTAPAPL GVDQKISQDQ
210 220 230 240 250
KPDSWLTYNA QFAQNSPQLA PSIPSPMKLS PANQQAMPPY PQMLGPGSIS
260 270 280 290 300
SYTNSNLGPS AGFRPPTFFS SPSPQPYSGP ILASTAPTLD GSYLSNPSNS
310 320 330 340 350
NPAVMSLSSN FPSPPKPNNP VYLPPRGNPT VNDRVSNVLP SITSFDSSVT
360 370 380 390 400
TVPSNSPATL NSYTTSVPSG MSRHPMLMNP STPEPSLGVN SPSLRPLQSL
410 420 430 440 450
NNVQNSYRVA STQAPPPHPL RNYTSDAESI SMRSKSTQAS DAATFREVEQ
460 470 480 490 500
LYQENVEWDD AAIDRYYLLI HSTLPILHHS KARLKSELEK APINLRSSCL
510 520 530 540 550
HAIYSLVNRP PFATLGHVFH NTPMKAIGLL NLICSNVQDL SNRILHLQTM
560 570 580 590 600
ILLAIESDQR GPTTITGRNG LPQGMWLGAA IGLACNMRLH IQSHLSLQSI
610 620 630 640 650
NEDMDSDEAL CRRAWWVLVV LDRWHSMSTC SPLFLPETFI NLTIQDQKLL
660 670 680 690 700
GTFPSQLVRL SLIVGHISDV FQSPDPTDRQ SPIVTQQLRS EIDAFRQSVD
710 720 730 740 750
VVWGQMNLLT LAVTHVKVLL ELCINARPST VLVPAMKMAT ILSSSSTPMT
760 770 780 790 800
PLNHHFFSLA TCVLIGVFDL PELQNEARRG LEHIRECIEK RRDIVSREDH
810 820 830 840 850
EDWDYIVLKL INAKMQGMPI NSDPSIPPHV PPSSAFAYSN QEMDSATFKD
860
AYLYTRLCNL GYLGFLI
Length:867
Mass (Da):95,112
Last modified:August 1, 1998 - v1
Checksum:i770E162A60C68FDA
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CU329672 Genomic DNA. Translation: CAA18305.1.
PIRiT41308.
RefSeqiNP_587726.1. NM_001022721.2.

Genome annotation databases

EnsemblFungiiSPCC320.03.1; SPCC320.03.1:pep; SPCC320.03.
GeneIDi2538949.
KEGGispo:SPCC320.03.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CU329672 Genomic DNA. Translation: CAA18305.1.
PIRiT41308.
RefSeqiNP_587726.1. NM_001022721.2.

3D structure databases

ProteinModelPortaliO59780.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

BioGridi275523. 12 interactions.
MINTiMINT-4676131.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblFungiiSPCC320.03.1; SPCC320.03.1:pep; SPCC320.03.
GeneIDi2538949.
KEGGispo:SPCC320.03.

Organism-specific databases

EuPathDBiFungiDB:SPCC320.03.
PomBaseiSPCC320.03.

Phylogenomic databases

InParanoidiO59780.
OrthoDBiEOG7JMGP0.
PhylomeDBiO59780.

Miscellaneous databases

PROiO59780.

Family and domain databases

Gene3Di4.10.240.10. 1 hit.
InterProiIPR007219. Transcription_factor_dom_fun.
IPR001138. Zn2-C6_fun-type_DNA-bd.
[Graphical view]
PfamiPF04082. Fungal_trans. 1 hit.
PF00172. Zn_clus. 1 hit.
[Graphical view]
SMARTiSM00066. GAL4. 1 hit.
[Graphical view]
SUPFAMiSSF57701. SSF57701. 1 hit.
PROSITEiPS00463. ZN2_CY6_FUNGAL_1. 1 hit.
PS50048. ZN2_CY6_FUNGAL_2. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. "The genome sequence of Schizosaccharomyces pombe."
    Wood V., Gwilliam R., Rajandream M.A., Lyne M.H., Lyne R., Stewart A., Sgouros J.G., Peat N., Hayles J., Baker S.G., Basham D., Bowman S., Brooks K., Brown D., Brown S., Chillingworth T., Churcher C.M., Collins M.
    , Connor R., Cronin A., Davis P., Feltwell T., Fraser A., Gentles S., Goble A., Hamlin N., Harris D.E., Hidalgo J., Hodgson G., Holroyd S., Hornsby T., Howarth S., Huckle E.J., Hunt S., Jagels K., James K.D., Jones L., Jones M., Leather S., McDonald S., McLean J., Mooney P., Moule S., Mungall K.L., Murphy L.D., Niblett D., Odell C., Oliver K., O'Neil S., Pearson D., Quail M.A., Rabbinowitsch E., Rutherford K.M., Rutter S., Saunders D., Seeger K., Sharp S., Skelton J., Simmonds M.N., Squares R., Squares S., Stevens K., Taylor K., Taylor R.G., Tivey A., Walsh S.V., Warren T., Whitehead S., Woodward J.R., Volckaert G., Aert R., Robben J., Grymonprez B., Weltjens I., Vanstreels E., Rieger M., Schaefer M., Mueller-Auer S., Gabel C., Fuchs M., Duesterhoeft A., Fritzc C., Holzer E., Moestl D., Hilbert H., Borzym K., Langer I., Beck A., Lehrach H., Reinhardt R., Pohl T.M., Eger P., Zimmermann W., Wedler H., Wambutt R., Purnelle B., Goffeau A., Cadieu E., Dreano S., Gloux S., Lelaure V., Mottier S., Galibert F., Aves S.J., Xiang Z., Hunt C., Moore K., Hurst S.M., Lucas M., Rochet M., Gaillardin C., Tallada V.A., Garzon A., Thode G., Daga R.R., Cruzado L., Jimenez J., Sanchez M., del Rey F., Benito J., Dominguez A., Revuelta J.L., Moreno S., Armstrong J., Forsburg S.L., Cerutti L., Lowe T., McCombie W.R., Paulsen I., Potashkin J., Shpakovski G.V., Ussery D., Barrell B.G., Nurse P.
    Nature 415:871-880(2002) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: 972 / ATCC 24843.
  2. "ORFeome cloning and global analysis of protein localization in the fission yeast Schizosaccharomyces pombe."
    Matsuyama A., Arai R., Yashiroda Y., Shirai A., Kamata A., Sekido S., Kobayashi Y., Hashimoto A., Hamamoto M., Hiraoka Y., Horinouchi S., Yoshida M.
    Nat. Biotechnol. 24:841-847(2006) [PubMed] [Europe PMC] [Abstract]
    Cited for: SUBCELLULAR LOCATION [LARGE SCALE ANALYSIS].

Entry informationi

Entry nameiYCN3_SCHPO
AccessioniPrimary (citable) accession number: O59780
Entry historyi
Integrated into UniProtKB/Swiss-Prot: November 13, 2007
Last sequence update: August 1, 1998
Last modified: June 8, 2016
This is version 91 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programFungal Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Schizosaccharomyces pombe
    Schizosaccharomyces pombe: entries and gene names
  2. SIMILARITY comments
    Index of protein domains and families

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.