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Protein

Uncharacterized transcriptional regulatory protein C530.08

Gene

SPBC530.08

Organism
Schizosaccharomyces pombe (strain 972 / ATCC 24843) (Fission yeast)
Status
Reviewed-Annotation score: -Protein inferred from homologyi

Functioni

Regions

Feature keyPosition(s)DescriptionActionsGraphical viewLength
DNA bindingi31 – 57Zn(2)-C6 fungal-typePROSITE-ProRule annotationAdd BLAST27

GO - Molecular functioni

GO - Biological processi

Keywordsi

Molecular functionDNA-binding
Biological processTranscription, Transcription regulation
LigandMetal-binding, Zinc

Names & Taxonomyi

Protein namesi
Recommended name:
Uncharacterized transcriptional regulatory protein C530.08
Gene namesi
ORF Names:SPBC530.08
OrganismiSchizosaccharomyces pombe (strain 972 / ATCC 24843) (Fission yeast)
Taxonomic identifieri284812 [NCBI]
Taxonomic lineageiEukaryotaFungiDikaryaAscomycotaTaphrinomycotinaSchizosaccharomycetesSchizosaccharomycetalesSchizosaccharomycetaceaeSchizosaccharomyces
Proteomesi
  • UP000002485 Componenti: Chromosome II

Organism-specific databases

EuPathDBiFungiDB:SPBC530.08
PomBaseiSPBC530.08

Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cell wall Cytoskeleton Vacuole Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertionGraphics by Christian Stolte; Source: COMPARTMENTS

Topology

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Transmembranei560 – 580HelicalSequence analysisAdd BLAST21

Keywords - Cellular componenti

Cytoplasm, Membrane, Nucleus

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_00003103911 – 815Uncharacterized transcriptional regulatory protein C530.08Add BLAST815

Proteomic databases

MaxQBiO59744
PaxDbiO59744
PRIDEiO59744

PTM databases

iPTMnetiO59744

Interactioni

Protein-protein interaction databases

BioGridi276790, 2 interactors
STRINGi4896.SPBC530.08.1

Structurei

3D structure databases

ProteinModelPortaliO59744
SMRiO59744
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Keywords - Domaini

Transmembrane, Transmembrane helix

Phylogenomic databases

InParanoidiO59744
OrthoDBiEOG092C12SH
PhylomeDBiO59744

Family and domain databases

CDDicd00067 GAL4, 1 hit
Gene3Di4.10.240.10, 1 hit
InterProiView protein in InterPro
IPR007219 Transcription_factor_dom_fun
IPR001138 Zn2-C6_fun-type_DNA-bd
IPR036864 Zn2-C6_fun-type_DNA-bd_sf
PfamiView protein in Pfam
PF04082 Fungal_trans, 1 hit
PF00172 Zn_clus, 1 hit
SMARTiView protein in SMART
SM00906 Fungal_trans, 1 hit
SM00066 GAL4, 1 hit
SUPFAMiSSF57701 SSF57701, 1 hit
PROSITEiView protein in PROSITE
PS00463 ZN2_CY6_FUNGAL_1, 1 hit
PS50048 ZN2_CY6_FUNGAL_2, 1 hit

Sequencei

Sequence statusi: Complete.

O59744-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MDNESHSQET ESKILEGAKV ATRRRRVTRA CDMCRRKKIK CDGLRPCKNC
60 70 80 90 100
KAGKLECTYH MPSSRKSSFS PEYVENLESR VRYLETLLKK NTNFDLSSNS
110 120 130 140 150
PSFLFFLREQ KFQATNELEN MSPERKVIFT SMINYGNLFV DAKHGTRYFR
160 170 180 190 200
GGSSIHVLIQ HLIRRLPGDF EICEPYSAYP LGNKNIQFDD NDPEYQFFTP
210 220 230 240 250
TPRFSIDFMV SSVDPREIQL PGIEEALCIT KAAVSYVSGI VFYTTYADFP
260 270 280 290 300
KKIRLLYSGN YQGNFFPLFL SILCVGYYHH LLNNPSNTEL QSLIKKYSFY
310 320 330 340 350
SERLVKSADN FTIESIQCLL ILSIYRYCRT EISAAWYYMK LGLNCCLRLG
360 370 380 390 400
LHRNITEGFT EEQIDSRRRI FWAIYCYDRQ LCTLFGFPLG VRDEDIDQCL
410 420 430 440 450
PVTPKFPSVT EIEANARLFF FHGVKLYKIS SRILTKLYSP NSRNVTKKHI
460 470 480 490 500
SYAVIQDLEQ LLDGFYNSLP RVFRAEQPGE FQANHFFYNL QLVYYSFRML
510 520 530 540 550
IYRPLLHYLE ADSPAMQALK VPDRQTAFTL ACKCVDSAIV CVQNLSHLSK
560 570 580 590 600
GLKRTLDRYY WTTVYCGFST IVTLIFAALL TKNTNLLIHI SVARESIEAL
610 620 630 640 650
AHECVTRRLL PLIDKMRESL MKILESNADG YKQMSPTKAP QVFESESNVP
660 670 680 690 700
INNGPQQSID KESNSNTQLP QVETEGQQQS VFDGNIGTIP YQAYNMNEDS
710 720 730 740 750
FIDINTLSSM LNYHTQAVSI HHPSFYISRS DVPLEEEFQI PNELLAVDPV
760 770 780 790 800
AESMQENSDI INEAFGLVDP DVSDGKSRES SSLNNSTPFN PTVNIDPASI
810
LEHFSQNVMK DSQNS
Length:815
Mass (Da):93,538
Last modified:August 1, 1998 - v1
Checksum:i174A8A711C467115
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CU329671 Genomic DNA Translation: CAA19174.1
PIRiT40524
RefSeqiNP_595321.1, NM_001021228.2

Genome annotation databases

EnsemblFungiiSPBC530.08.1; SPBC530.08.1:pep; SPBC530.08
GeneIDi2540259
KEGGispo:SPBC530.08

Entry informationi

Entry nameiYN28_SCHPO
AccessioniPrimary (citable) accession number: O59744
Entry historyiIntegrated into UniProtKB/Swiss-Prot: November 13, 2007
Last sequence update: August 1, 1998
Last modified: March 28, 2018
This is version 107 of the entry and version 1 of the sequence. See complete history.
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programFungal Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome
UniProt is an ELIXIR core data resource
Main funding by: National Institutes of Health