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Protein

Uncharacterized transcriptional regulatory protein C530.05

Gene

SPBC530.05

Organism
Schizosaccharomyces pombe (strain 972 / ATCC 24843) (Fission yeast)
Status
Reviewed-Annotation score: Annotation score: 2 out of 5-Protein inferred from homologyi

Functioni

Regions

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
DNA bindingi30 – 5728Zn(2)-C6 fungal-typePROSITE-ProRule annotationAdd
BLAST

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Biological processi

Transcription, Transcription regulation

Keywords - Ligandi

DNA-binding, Metal-binding, Zinc

Names & Taxonomyi

Protein namesi
Recommended name:
Uncharacterized transcriptional regulatory protein C530.05
Gene namesi
ORF Names:SPBC530.05
OrganismiSchizosaccharomyces pombe (strain 972 / ATCC 24843) (Fission yeast)
Taxonomic identifieri284812 [NCBI]
Taxonomic lineageiEukaryotaFungiDikaryaAscomycotaTaphrinomycotinaSchizosaccharomycetesSchizosaccharomycetalesSchizosaccharomycetaceaeSchizosaccharomyces
Proteomesi
  • UP000002485 Componenti: Chromosome II

Organism-specific databases

EuPathDBiFungiDB:SPBC530.05.
PomBaseiSPBC530.05.

Subcellular locationi

  • Nucleus PROSITE-ProRule annotation1 Publication

GO - Cellular componenti

  • cytosol Source: PomBase
  • nucleus Source: PomBase
Complete GO annotation...

Keywords - Cellular componenti

Nucleus

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 762762Uncharacterized transcriptional regulatory protein C530.05PRO_0000115013Add
BLAST

Proteomic databases

MaxQBiO59741.

Interactioni

Protein-protein interaction databases

BioGridi277419. 20 interactions.
MINTiMINT-4675821.

Family & Domainsi

Sequence similaritiesi

Contains 1 Zn(2)-C6 fungal-type DNA-binding domain.PROSITE-ProRule annotation

Phylogenomic databases

InParanoidiO59741.
OMAiPLASICS.
OrthoDBiEOG7B05ND.

Family and domain databases

Gene3Di4.10.240.10. 1 hit.
InterProiIPR007219. Transcription_factor_dom_fun.
IPR001138. Zn2-C6_fun-type_DNA-bd.
[Graphical view]
PfamiPF04082. Fungal_trans. 1 hit.
PF00172. Zn_clus. 1 hit.
[Graphical view]
SMARTiSM00906. Fungal_trans. 1 hit.
SM00066. GAL4. 1 hit.
[Graphical view]
SUPFAMiSSF57701. SSF57701. 1 hit.
PROSITEiPS00463. ZN2_CY6_FUNGAL_1. 1 hit.
PS50048. ZN2_CY6_FUNGAL_2. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

O59741-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MENLKSASPE EDSPRHGDNM GKPKRIPRAC DMCRKRKIRC DGKQPACSNC
60 70 80 90 100
VSHGIPCVFT ARPKRRTGQR QMYIKSLVSR LEQMESTLRS VIPNYDQQPD
110 120 130 140 150
IIHPSSTPKN YHDLNCTKGE TSSDDSTDDI AFLNEKMGTL VTTPIGSQKY
160 170 180 190 200
FGSSSTFSII QHAAKFASGV ESDKVLEHLS MAKSGCLFDP DESFDGSKAE
210 220 230 240 250
LPSSEIANIY IDAYFKSYNP LFPVFTRENF YQKFGSPNCF KKPDGSIDLV
260 270 280 290 300
NYASYVVVLS LGCLAIADTE EQVSRANALF KNTLGISIEV TKDMSFRTLV
310 320 330 340 350
FNFLTSVYYC AVSKPNAVWL NVGVVVRVAQ TLGLHRNSAM WSIGKEDAEE
360 370 380 390 400
KARLFWYIYY LDRVSSMMTG KPVAFQDDDI DQMVPFYSIY CYYGLKPPEG
410 420 430 440 450
DPLGTFNFLE AEVQLTRIVG QVLKELYSVS GMKSNSSQVM EKILEFDLLL
460 470 480 490 500
NNWYNSLPDC MQPRNRFKIP KFCSSNLILT SAIYYSCLIL IHRHSLTKNL
510 520 530 540 550
QVNCVHRGTG SITDSQALCI AAARSITNLF VESVDLQPLI MKIIMYHAFT
560 570 580 590 600
SSIIIFISIL KRPLASICSE DLNCLISVKN RLISFETHGF VRLNVVMDAL
610 620 630 640 650
ESMISTAQAA MQKAKQIAIN FSSNLATNED VTNSGMPDIA DVSLKSQSHV
660 670 680 690 700
PPRISSNHSD TSVKSNSPSS IFDNSGYLNS LNNSILQMHQ NLQNSSNTND
710 720 730 740 750
QYKFDSVQEN ELHANITPVL DQTMSMFPFK DQLDLNFAAA NVYNPNVFDD
760
MGLDCSFYGN GL
Length:762
Mass (Da):85,199
Last modified:October 3, 2012 - v2
Checksum:i8CAA1CB7267CB535
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CU329671 Genomic DNA. Translation: CAA19171.2.
AB027808 Genomic DNA. Translation: BAA87112.1.
PIRiT40521.
RefSeqiNP_595318.2. NM_001021225.2.

Genome annotation databases

EnsemblFungiiSPBC530.05.1; SPBC530.05.1:pep; SPBC530.05.
GeneIDi2540903.
KEGGispo:SPBC530.05.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CU329671 Genomic DNA. Translation: CAA19171.2.
AB027808 Genomic DNA. Translation: BAA87112.1.
PIRiT40521.
RefSeqiNP_595318.2. NM_001021225.2.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

BioGridi277419. 20 interactions.
MINTiMINT-4675821.

Proteomic databases

MaxQBiO59741.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblFungiiSPBC530.05.1; SPBC530.05.1:pep; SPBC530.05.
GeneIDi2540903.
KEGGispo:SPBC530.05.

Organism-specific databases

EuPathDBiFungiDB:SPBC530.05.
PomBaseiSPBC530.05.

Phylogenomic databases

InParanoidiO59741.
OMAiPLASICS.
OrthoDBiEOG7B05ND.

Miscellaneous databases

NextBioi20802018.
PROiO59741.

Family and domain databases

Gene3Di4.10.240.10. 1 hit.
InterProiIPR007219. Transcription_factor_dom_fun.
IPR001138. Zn2-C6_fun-type_DNA-bd.
[Graphical view]
PfamiPF04082. Fungal_trans. 1 hit.
PF00172. Zn_clus. 1 hit.
[Graphical view]
SMARTiSM00906. Fungal_trans. 1 hit.
SM00066. GAL4. 1 hit.
[Graphical view]
SUPFAMiSSF57701. SSF57701. 1 hit.
PROSITEiPS00463. ZN2_CY6_FUNGAL_1. 1 hit.
PS50048. ZN2_CY6_FUNGAL_2. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

« Hide 'large scale' publications
  1. "The genome sequence of Schizosaccharomyces pombe."
    Wood V., Gwilliam R., Rajandream M.A., Lyne M.H., Lyne R., Stewart A., Sgouros J.G., Peat N., Hayles J., Baker S.G., Basham D., Bowman S., Brooks K., Brown D., Brown S., Chillingworth T., Churcher C.M., Collins M.
    , Connor R., Cronin A., Davis P., Feltwell T., Fraser A., Gentles S., Goble A., Hamlin N., Harris D.E., Hidalgo J., Hodgson G., Holroyd S., Hornsby T., Howarth S., Huckle E.J., Hunt S., Jagels K., James K.D., Jones L., Jones M., Leather S., McDonald S., McLean J., Mooney P., Moule S., Mungall K.L., Murphy L.D., Niblett D., Odell C., Oliver K., O'Neil S., Pearson D., Quail M.A., Rabbinowitsch E., Rutherford K.M., Rutter S., Saunders D., Seeger K., Sharp S., Skelton J., Simmonds M.N., Squares R., Squares S., Stevens K., Taylor K., Taylor R.G., Tivey A., Walsh S.V., Warren T., Whitehead S., Woodward J.R., Volckaert G., Aert R., Robben J., Grymonprez B., Weltjens I., Vanstreels E., Rieger M., Schaefer M., Mueller-Auer S., Gabel C., Fuchs M., Duesterhoeft A., Fritzc C., Holzer E., Moestl D., Hilbert H., Borzym K., Langer I., Beck A., Lehrach H., Reinhardt R., Pohl T.M., Eger P., Zimmermann W., Wedler H., Wambutt R., Purnelle B., Goffeau A., Cadieu E., Dreano S., Gloux S., Lelaure V., Mottier S., Galibert F., Aves S.J., Xiang Z., Hunt C., Moore K., Hurst S.M., Lucas M., Rochet M., Gaillardin C., Tallada V.A., Garzon A., Thode G., Daga R.R., Cruzado L., Jimenez J., Sanchez M., del Rey F., Benito J., Dominguez A., Revuelta J.L., Moreno S., Armstrong J., Forsburg S.L., Cerutti L., Lowe T., McCombie W.R., Paulsen I., Potashkin J., Shpakovski G.V., Ussery D., Barrell B.G., Nurse P.
    Nature 415:871-880(2002) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: 972 / ATCC 24843.
  2. "Comparative functional genomics of the fission yeasts."
    Rhind N., Chen Z., Yassour M., Thompson D.A., Haas B.J., Habib N., Wapinski I., Roy S., Lin M.F., Heiman D.I., Young S.K., Furuya K., Guo Y., Pidoux A., Chen H.M., Robbertse B., Goldberg J.M., Aoki K.
    , Bayne E.H., Berlin A.M., Desjardins C.A., Dobbs E., Dukaj L., Fan L., FitzGerald M.G., French C., Gujja S., Hansen K., Keifenheim D., Levin J.Z., Mosher R.A., Mueller C.A., Pfiffner J., Priest M., Russ C., Smialowska A., Swoboda P., Sykes S.M., Vaughn M., Vengrova S., Yoder R., Zeng Q., Allshire R., Baulcombe D., Birren B.W., Brown W., Ekwall K., Kellis M., Leatherwood J., Levin H., Margalit H., Martienssen R., Nieduszynski C.A., Spatafora J.W., Friedman N., Dalgaard J.Z., Baumann P., Niki H., Regev A., Nusbaum C.
    Science 332:930-936(2011) [PubMed] [Europe PMC] [Abstract]
    Cited for: REVISION OF GENE MODEL.
  3. "Large-scale screening of intracellular protein localization in living fission yeast cells by the use of a GFP-fusion genomic DNA library."
    Ding D.-Q., Tomita Y., Yamamoto A., Chikashige Y., Haraguchi T., Hiraoka Y.
    Genes Cells 5:169-190(2000) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA] OF 20-90, SUBCELLULAR LOCATION.
    Strain: ATCC 38364 / 968.

Entry informationi

Entry nameiYN25_SCHPO
AccessioniPrimary (citable) accession number: O59741
Secondary accession number(s): Q9UU51
Entry historyi
Integrated into UniProtKB/Swiss-Prot: May 16, 2003
Last sequence update: October 3, 2012
Last modified: April 13, 2016
This is version 107 of the entry and version 2 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programFungal Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Schizosaccharomyces pombe
    Schizosaccharomyces pombe: entries and gene names
  2. SIMILARITY comments
    Index of protein domains and families

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.