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Protein
Submitted name:

EchF protein

Gene

echF

Organism
Methanosarcina barkeri
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

Enzyme and pathway databases

BioCyciMetaCyc:MONOMER-12662.

Protein family/group databases

TCDBi3.D.1.4.2. the h(+) or na(+)-translocating nadh dehydrogenase (ndh) family.

Names & Taxonomyi

Protein namesi
Submitted name:
EchF proteinImported
Gene namesi
Name:echFImported
OrganismiMethanosarcina barkeriImported
Taxonomic identifieri2208 [NCBI]
Taxonomic lineageiArchaeaEuryarchaeotaMethanomicrobiaMethanosarcinalesMethanosarcinaceaeMethanosarcina

Interactioni

Protein-protein interaction databases

STRINGi269797.Mbar_A0147.

Structurei

3D structure databases

ProteinModelPortaliO59657.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Domaini33 – 62304Fe-4S ferredoxin-typeInterPro annotationAdd
BLAST
Domaini64 – 93304Fe-4S ferredoxin-typeInterPro annotationAdd
BLAST

Phylogenomic databases

eggNOGiENOG4102TNH. Archaea.
ENOG41122HR. LUCA.

Family and domain databases

InterProiIPR017896. 4Fe4S_Fe-S-bd.
IPR017900. 4Fe4S_Fe_S_CS.
[Graphical view]
PfamiPF13187. Fer4_9. 1 hit.
[Graphical view]
PROSITEiPS00198. 4FE4S_FER_1. 2 hits.
PS51379. 4FE4S_FER_2. 2 hits.
[Graphical view]

Sequencei

Sequence statusi: Complete.

O59657-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MGMLNLVLTN ISRKPATRLY PFEIREPFKE FKGRIVFDPE NCILCGLCQK
60 70 80 90 100
KCPPDAITVT KADKTWELNL FRCIMCTECV NGCPKGCLSI SNERAKTGAE
110 120
EVIKIAVPIV DKPKAPKAAP SK
Length:122
Mass (Da):13,542
Last modified:August 1, 1998 - v1
Checksum:i9C4EB3B77B02B7C7
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
Y16191 Genomic DNA. Translation: CAA76122.1.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
Y16191 Genomic DNA. Translation: CAA76122.1.

3D structure databases

ProteinModelPortaliO59657.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi269797.Mbar_A0147.

Protein family/group databases

TCDBi3.D.1.4.2. the h(+) or na(+)-translocating nadh dehydrogenase (ndh) family.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Phylogenomic databases

eggNOGiENOG4102TNH. Archaea.
ENOG41122HR. LUCA.

Enzyme and pathway databases

BioCyciMetaCyc:MONOMER-12662.

Family and domain databases

InterProiIPR017896. 4Fe4S_Fe-S-bd.
IPR017900. 4Fe4S_Fe_S_CS.
[Graphical view]
PfamiPF13187. Fer4_9. 1 hit.
[Graphical view]
PROSITEiPS00198. 4FE4S_FER_1. 2 hits.
PS51379. 4FE4S_FER_2. 2 hits.
[Graphical view]
ProtoNetiSearch...

Entry informationi

Entry nameiO59657_METBA
AccessioniPrimary (citable) accession number: O59657
Entry historyi
Integrated into UniProtKB/TrEMBL: August 1, 1998
Last sequence update: August 1, 1998
Last modified: December 9, 2015
This is version 75 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.