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Protein

Putative HTH-type transcriptional regulatory protein PH1808

Gene

PH1808

Organism
Pyrococcus horikoshii (strain ATCC 700860 / DSM 12428 / JCM 9974 / NBRC 100139 / OT-3)
Status
Reviewed-Annotation score: -Protein inferred from homologyi

Functioni

Regions

Feature keyPosition(s)DescriptionActionsGraphical viewLength
DNA bindingi142 – 161H-T-H motifUniRule annotationAdd BLAST20

GO - Molecular functioni

GO - Biological processi

Keywordsi

Molecular functionDNA-binding
Biological processTranscription, Transcription regulation

Enzyme and pathway databases

BioCyciPHOR70601:G1G39-1749-MONOMER

Names & Taxonomyi

Protein namesi
Recommended name:
Putative HTH-type transcriptional regulatory protein PH1808UniRule annotation
Gene namesi
Ordered Locus Names:PH1808
OrganismiPyrococcus horikoshii (strain ATCC 700860 / DSM 12428 / JCM 9974 / NBRC 100139 / OT-3)
Taxonomic identifieri70601 [NCBI]
Taxonomic lineageiArchaeaEuryarchaeotaThermococciThermococcalesThermococcaceaePyrococcus
Proteomesi
  • UP000000752 Componenti: Chromosome

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_00001448631 – 315Putative HTH-type transcriptional regulatory protein PH1808Add BLAST315

Proteomic databases

PRIDEiO59472

Interactioni

Protein-protein interaction databases

STRINGi70601.PH1808

Structurei

3D structure databases

ProteinModelPortaliO59472
SMRiO59472
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini131 – 189HTH cro/C1-typeUniRule annotationAdd BLAST59

Phylogenomic databases

eggNOGiarCOG04152 Archaea
COG1395 LUCA
HOGENOMiHOG000230106
KOiK07728
OMAiGVVYFRH
OrthoDBiPOG093Z05RI

Family and domain databases

CDDicd00093 HTH_XRE, 1 hit
HAMAPiMF_00584 HTH_type_cro_C1, 1 hit
InterProiView protein in InterPro
IPR001387 Cro/C1-type_HTH
IPR010982 Lambda_DNA-bd_dom_sf
IPR020886 Tscrpt_reg_HTH_Cro/C1
PfamiView protein in Pfam
PF01381 HTH_3, 1 hit
SMARTiView protein in SMART
SM00530 HTH_XRE, 1 hit
SUPFAMiSSF47413 SSF47413, 1 hit
PROSITEiView protein in PROSITE
PS50943 HTH_CROC1, 1 hit

Sequencei

Sequence statusi: Complete.

O59472-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MERNELVNFV EGILKRIGFR TMKLEFRGGC FDLVATRQLL LLFIKALANI
60 70 80 90 100
DKFSEEQAED LKKLAKLFKA SPLLVGLRSK NAELEDGVVY ERFGIYAITP
110 120 130 140 150
GTLYSMFAEG EPPLIIAERG GFYVRIDGKK LKALREEHGY SITELAGILG
160 170 180 190 200
ISRKSLQRYE KGESVVSLEV ALRLEEVFDE PLVKPIDVLR ARLKDVTLTS
210 220 230 240 250
EPDNILEKEV FEKLRKLGMS VVKIKTAPFN AITKEEEDDI ELLTGIDERK
260 270 280 290 300
TGRTLKRAEL VSQMAEVVGS DGVFVVKKAR MEVVRNVPIL PKKLLEEIKD
310
ADELLELIRD LKFKS
Length:315
Mass (Da):35,657
Last modified:October 25, 2002 - v2
Checksum:i2FC9342421984443
GO

Sequence cautioni

The sequence BAA30927 differs from that shown. Reason: Erroneous initiation.Curated

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BA000001 Genomic DNA Translation: BAA30927.1 Different initiation.
PIRiH71191
RefSeqiWP_048053613.1, NC_000961.1

Genome annotation databases

EnsemblBacteriaiBAA30927; BAA30927; BAA30927
GeneIDi1442650
KEGGipho:PH1808

Similar proteinsi

Entry informationi

Entry nameiY1808_PYRHO
AccessioniPrimary (citable) accession number: O59472
Entry historyiIntegrated into UniProtKB/Swiss-Prot: October 25, 2002
Last sequence update: October 25, 2002
Last modified: April 25, 2018
This is version 99 of the entry and version 2 of the sequence. See complete history.
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

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