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Protein

30S ribosomal protein S4e

Gene

rps4e

Organism
Pyrococcus horikoshii (strain ATCC 700860 / DSM 12428 / JCM 9974 / NBRC 100139 / OT-3)
Status
Reviewed-Annotation score: -Protein inferred from homologyi

Functioni

GO - Molecular functioni

GO - Biological processi

Keywordsi

Molecular functionRibonucleoprotein, Ribosomal protein, RNA-binding, rRNA-binding

Enzyme and pathway databases

BioCyciPHOR70601:G1G39-1711-MONOMER

Names & Taxonomyi

Protein namesi
Recommended name:
30S ribosomal protein S4e
Gene namesi
Name:rps4e
Ordered Locus Names:PH1766
OrganismiPyrococcus horikoshii (strain ATCC 700860 / DSM 12428 / JCM 9974 / NBRC 100139 / OT-3)
Taxonomic identifieri70601 [NCBI]
Taxonomic lineageiArchaeaEuryarchaeotaThermococciThermococcalesThermococcaceaePyrococcus
Proteomesi
  • UP000000752 Componenti: Chromosome

Subcellular locationi

GO - Cellular componenti

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_00001308601 – 24330S ribosomal protein S4eAdd BLAST243

Proteomic databases

PRIDEiO59430

Interactioni

Protein-protein interaction databases

STRINGi70601.PH1766

Structurei

3D structure databases

SMRiO59430
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini43 – 105S4 RNA-bindingAdd BLAST63

Sequence similaritiesi

Phylogenomic databases

eggNOGiarCOG04093 Archaea
COG1471 LUCA
HOGENOMiHOG000231324
KOiK02987
OMAiRKDYKFP
OrthoDBiPOG093Z0C23

Family and domain databases

CDDicd00165 S4, 1 hit
Gene3Di2.30.30.30, 1 hit
2.40.50.740, 1 hit
HAMAPiMF_00485 Ribosomal_S4e, 1 hit
InterProiView protein in InterPro
IPR005824 KOW
IPR014722 Rib_L2_dom2
IPR000876 Ribosomal_S4e
IPR013845 Ribosomal_S4e_central_region
IPR038237 Ribosomal_S4e_central_sf
IPR013843 Ribosomal_S4e_N
IPR018199 Ribosomal_S4e_N_CS
IPR002942 S4_RNA-bd
PANTHERiPTHR11581 PTHR11581, 1 hit
PfamiView protein in Pfam
PF00900 Ribosomal_S4e, 1 hit
PF08071 RS4NT, 1 hit
PF01479 S4, 1 hit
PIRSFiPIRSF002116 Ribosomal_S4, 1 hit
ProDomiView protein in ProDom or Entries sharing at least one domain
PD002667 Ribosomal_S4e_central, 1 hit
SMARTiView protein in SMART
SM00739 KOW, 1 hit
SM00363 S4, 1 hit
PROSITEiView protein in PROSITE
PS00528 RIBOSOMAL_S4E, 1 hit
PS50889 S4, 1 hit

Sequencei

Sequence statusi: Complete.

O59430-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MARKGPKRHL KRLAAPSSWY IERKAYKWAV RPRPGPHNMR TSIPLLYIVR
60 70 80 90 100
DYLGYAKTAR EARKILNEGK FLVDGKVRKD YKFPVGIMDV VSIPETGEHY
110 120 130 140 150
RVLPNRIGKL VLHPISEEEA NIKPLRIRNK RMVKGAKVQL NFHDGTNHLI
160 170 180 190 200
PLTEKDNYFT SYTVLMKVPE REIMEVLPFE KGAYVFVTQG KNVARKGRIV
210 220 230 240
EIKKFPMGWP DVVTIEDEEG ELFDTLKEYA FVVGKDKPKI SLP
Length:243
Mass (Da):28,100
Last modified:August 1, 1998 - v1
Checksum:i67AACEE8846AF35F
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BA000001 Genomic DNA Translation: BAA30881.1
PIRiB71186
RefSeqiWP_010885828.1, NC_000961.1

Genome annotation databases

EnsemblBacteriaiBAA30881; BAA30881; BAA30881
GeneIDi1442610
KEGGipho:PH1766

Similar proteinsi

Entry informationi

Entry nameiRS4E_PYRHO
AccessioniPrimary (citable) accession number: O59430
Entry historyiIntegrated into UniProtKB/Swiss-Prot: May 30, 2000
Last sequence update: August 1, 1998
Last modified: May 23, 2018
This is version 103 of the entry and version 1 of the sequence. See complete history.
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

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