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O59425 (RNP1_PYRHO) Reviewed, UniProtKB/Swiss-Prot

Last modified May 1, 2013. Version 80. Feed History...

Clusters with 100%, 90%, 50% identity | Documents (2) | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesRecommended name:
Ribonuclease P protein component 1
Short name=RNase P component 1
EC=3.1.26.5
Gene names
Name:rnp1
Ordered Locus Names:PH1771
OrganismPyrococcus horikoshii (strain ATCC 700860 / DSM 12428 / JCM 9974 / NBRC 100139 / OT-3) [Complete proteome] [HAMAP]
Taxonomic identifier70601 [NCBI]
Taxonomic lineageArchaea › Euryarchaeota › Thermococci › Thermococcales › Thermococcaceae › Pyrococcus ›

Protein attributes

Sequence length127 AA.
Sequence statusComplete.
Protein existenceEvidence at protein level

General annotation (Comments)

Function

Part of ribonuclease P, a protein complex that generates mature tRNA molecules by cleaving their 5'-ends By similarity. HAMAP-Rule MF_00754

Catalytic activity

Endonucleolytic cleavage of RNA, removing 5'-extranucleotides from tRNA precursor. HAMAP-Rule MF_00754

Subunit structure

Consists of a catalytic RNA component and at least 4 protein subunits Potential.

Sequence similarities

Belongs to the eukaryotic/archaeal RNase P protein component 1 family.

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Chain1 – 127127Ribonuclease P protein component 1 HAMAP-Rule MF_00754
PRO_0000128437

Secondary structure

1 ....................... 127
Helix Strand Turn

Details...

Sequences

Sequence LengthMass (Da)Tools
O59425 [UniParc].

Last modified August 1, 1998. Version 1.
Checksum: 840FE2A1234FF0AD

FASTA12715,054
        10         20         30         40         50         60 
MRRNSKERKN RATRRSQGSY QEIIGRTWIF RGAHRGRVTR RNIIWHELIG LRVRIVGSTH 

        70         80         90        100        110        120 
PAFVGIEGYV IDETRNMLVI AGDRIWKVPK DVCIFEFEAD DGTKIKIPGE RLVGRPEMRL 


KKRWKKW

« Hide

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		BA000001 Genomic DNA. Translation: BAA30886.1.
PIRG71186.
RefSeqNP_143607.1. NC_000961.1.

3D structure databases

PDBe
RCSB PDB
PDBj
EntryMethodResolution (Å)ChainPositionsPDBsum
1V76X-ray2.00A/B32-127[»]
2ZAEX-ray2.21A/C1-127[»]
ProteinModelPortalO59425.
SMRO59425. Positions 36-127.
ModBaseSearch...

Protein-protein interaction databases

IntActO59425. 1 interaction.
STRING70601.PH1771.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaBAA30886; BAA30886; BAA30886.
GeneID1442614.
KEGGpho:PH1771.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG1588.
HOGENOMHOG000231353.
KOK03538.
OMAPEMRLKK.
ProtClustDBPRK03879.

Enzyme and pathway databases

BioCycPHOR70601:GJWR-1769-MONOMER.

Family and domain databases

Gene3D2.30.30.210. 1 hit.
HAMAPMF_00754. RNase_P_1.
InterProIPR002730. RNase_P/MRP_p29.
IPR023538. RNase_P_comp-1.
IPR023534. Rof/RNase_P-like.
[Graphical view]
PfamPF01868. UPF0086. 1 hit.
[Graphical view]
SMARTSM00538. POP4. 1 hit.
[Graphical view]
SUPFAMSSF101744. RNase_P_Rpp29. 1 hit.
ProtoNetSearch...

Other

EvolutionaryTraceO59425.

Entry information

Entry nameRNP1_PYRHO
AccessionPrimary (citable) accession number: O59425
Entry history
Integrated into UniProtKB/Swiss-Prot: May 30, 2000
Last sequence update: August 1, 1998
Last modified: May 1, 2013
This is version 80 of the entry and version 1 of the sequence. [Complete history]
Entry statusReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Relevant documents

PDB cross-references

Index of Protein Data Bank (PDB) cross-references

SIMILARITY comments

Index of protein domains and families

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