Putative uncharacterized protein PH1780 - Pyrococcus horikoshii (strain ATCC 700860 / DSM 12428 / JCM 9974 / NBRC 100139 / OT-3)

Preferred order of sections

Names and origin

Protein names

Submitted name:
Putative uncharacterized protein PH1780 EMBL BAA30898.1

Gene names

Ordered Locus Names:

PH1780

Organism

Pyrococcus horikoshii (strain ATCC 700860 / DSM 12428 / JCM 9974 / NBRC 100139 / OT-3) [Complete proteome] [HAMAP]

Taxonomic identifier

70601 [NCBI]

Taxonomic lineage

Archaea › Euryarchaeota › Thermococci › Thermococcales › Thermococcaceae › Pyrococcus

Protein attributes

Sequence length	285 AA.
Sequence status	Complete.
Protein existence	Evidence at protein level

Ontologies

Keywords
Ligand	S-adenosyl-L-methionine PDB 2YZQ
Technical term	3D-structure PDB 2YZQ Complete proteome
Gene Ontology (GO)
Molecular function	catalytic activity Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequence annotation (Features)

Feature key

Position(s)

Length

Description

Graphical view

Feature identifier

Regions

Region

180 – 183

4

S-adenosyl-L-methionine binding PDB 2YZQ

Region

254 – 257

4

S-adenosyl-L-methionine binding PDB 2YZQ

Sites

Binding site

231

1

S-adenosyl-L-methionine PDB 2YZQ

Binding site

235

1

S-adenosyl-L-methionine; via amide nitrogen and carbonyl oxygen PDB 2YZQ

Sequences

Sequence

Length

Mass (Da)

Tools

O59416 [UniParc].

Last modified August 1, 1998. Version 1.
Checksum: C5621DC718318CDC
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FASTA

285

32,305

        10         20         30         40         50         60 
MIWVRVKTIM TQNPVTITLP ATRNYALELF KKYKVRSFPV VNKEGKLVGI ISVKRILVNP 

        70         80         90        100        110        120 
DEEQLAMLVK RDVPVVKEND TLKKAAKLML EYDYRRVVVV DSKGKPVGIL TVGDIIRRYF 

       130        140        150        160        170        180 
AKSEKYKGVE IEPYYQRYVS IVWEGTPLKA ALKALLLSNS MALPVVDSEG NLVGIVDETD 

       190        200        210        220        230        240 
LLRDSEIVRI MKSTELAASS EEEWILESHP TLLFEKFELQ LPNKPVAEIM TRDVIVATPH 

       250        260        270        280 
MTVHEVALKM AKYSIEQLPV IRGEGDLIGL IRDFDLLKVL VKSKA

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References

	« Hide 'large scale' referencesShow 'large scale' references »
[1]	"Complete sequence and gene organization of the genome of a hyper-thermophilic archaebacterium, Pyrococcus horikoshii OT3." Kawarabayasi Y., Sawada M., Horikawa H., Haikawa Y., Hino Y., Yamamoto S., Sekine M., Baba S., Kosugi H., Hosoyama A., Nagai Y., Sakai M., Ogura K., Otsuka R., Nakazawa H., Takamiya M., Ohfuku Y., Funahashi T. Kikuchi H. DNA Res. 5:55-76(1998) [PubMed: 9679194] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: ATCC 700860 / DSM 12428 / JCM 9974 / NBRC 100139 / OT-3 and OT3.
[2]	"Crystal structure of uncharacterized conserved protein from Pyrococcus horikoshii." Kanagawa M., Minami Y., Watanabe N., Yokoyama S., Kuramitsu S. Submitted (MAY-2007) to the PDB data bank Cited for: X-RAY CRYSTALLOGRAPHY (1.63 ANGSTROMS) OF 5-285 IN COMPLEX WITH S-ADENOSYL-L-METHIONINE.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ

BA000001 Genomic DNA. Translation: BAA30898.1.

PIR

C71188.

RefSeq

NP_143619.1. NC_000961.1.

3D structure databases

PDBe
RCSB PDB
PDBj

Entry	Method	Resolution (Å)	Chain	Positions	PDBsum
2YZQ	X-ray	1.63	A	5-285	[»]

ProteinModelPortal

O59416.

SMR

O59416. Positions 4-281.

ModBase

Search...

Protocols and materials databases

StructuralBiologyKnowledgebase

Search...

Genome annotation databases

EnsemblBacteria

EBPYRT00000000447; EBPYRP00000000447; EBPYRG00000000447.

GeneID

1442626.

GenomeReviews

Gene locus PH1780 in contig BA000001_GR.

KEGG

pho:PH1780.

NMPDR

fig|70601.1.peg.1740.

Organism-specific databases

CMR

Search...

Phylogenomic databases

GeneTree

EBGT00050000022225.

HOGENOM

HBG551741.

OMA

DEWTWES.

ProtClustDB

CLSK253145.

Enzyme and pathway databases

BioCyc

PHOR70601:PH1780-MONOMER.

Family and domain databases

InterPro

IPR013785. Aldolase_TIM.
IPR000644. Cysta_beta_synth_core.
[Graphical view]

Gene3D

G3DSA:3.20.20.70. Aldolase_TIM. 3 hits.

Pfam

PF00571. CBS. 4 hits.
[Graphical view]

SMART

SM00116. CBS. 4 hits.
[Graphical view]

PROSITE

PS51371. CBS. 4 hits.
[Graphical view]

ProtoNet

Search...

Entry information

Entry name

O59416_PYRHO

Accession

Primary (citable) accession number: O59416

Entry history

Integrated into UniProtKB/TrEMBL:	August 1, 1998
Last sequence update:	August 1, 1998
Last modified:	October 19, 2011
This is version 64 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)